Os03g0734200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os03g0734200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 189.8 | 0.647 | 6.23 | -2.17 | 1.6 | 1.52 | 0.188 | 7.67 | 0.422 | 5.38 | 0.4231 | 4312 | -- | -- |
| 204.51 | 0.666 | 6.02 | -1.09 | 1.39 | 0.845 | 0.27 | -- | 0.655 | 6.11 | 10 | 13343 | -- | -- |
| 189.83 | 0.642 | 6.23 | -2.15 | 1.6 | 1.54 | -- | 7.77 | 0.42 | 5.35 | 0.38 | 4302 | -- | -- |
| 200.34 | 0.659 | 6.04 | -0.972 | 1.49 | 0.89 | -- | -- | 0.744 | 5.64 | 10 | 13247 | -- | -- |
| 240.16 | 0.722 | 6.1 | -1.37 | -- | 2.34 | -- | 6.43 | 0.69 | -- | 1.251 | 5029 | -- | -- |
| 226.67 | 0.706 | 6.04 | -0.876 | 1.56 | -- | 0.0725 | -- | 0.623 | 5.51 | -- | -- | -- | -- |
| 226.69 | 0.705 | 6.04 | -0.876 | 1.56 | -- | -- | -- | 0.622 | 5.51 | -- | -- | -- | -- |
| 219.68 | 0.69 | 6.07 | -0.785 | -- | 2.22 | -- | -- | 0.648 | -- | 6.062 | 2123 | -- | -- |
| 218.68 | 0.689 | 5.94 | -- | 1.46 | 1.06 | -- | -- | 1.04 | 5.65 | 6.206 | 13279 | -- | -- |
| 353.57 | 0.879 | 6.07 | -0.824 | -- | -- | -- | -- | 0.66 | -- | -- | -- | -- | -- |
| 246.9 | 0.735 | 6.02 | -- | 1.55 | -- | -- | -- | 0.72 | 5.53 | -- | -- | -- | -- |
| 228.97 | 0.705 | 5.99 | -- | -- | 2.53 | -- | -- | 0.976 | -- | 5.116 | 2145 | -- | -- |
| 371.49 | 0.9 | 6.04 | -- | -- | -- | -- | -- | 0.752 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 181.31 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 11 |
| 2 | 181.73 | radiation | 1 | 43200 | < th | dose dependent | rect. | 24 | 5 |
| 3 | 181.74 | radiation | 1 | 43200 | < th | dose dependent | rect. | 21 | 8 |
| 4 | 181.75 | radiation | 1 | 43200 | < th | dose dependent | rect. | 3 | 2 |
| 12 | 182.36 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 25 | 183.06 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 26 | 183.08 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 8 |
| 35 | 183.31 | humidity | 60 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 44 | 184.40 | temperature | 20 | 14400 | < th | dose dependent | rect. | 4 | 6 |
| 52 | 184.54 | temperature | 20 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 63 | 184.64 | temperature | 20 | 14400 | < th | dose dependent | rect. | 3 | 15 |
| 94 | 184.97 | temperature | 20 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 117 | 185.29 | temperature | 20 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 120 | 185.31 | temperature | 20 | 14400 | < th | dose dependent | sin | 2 | NA |
| 266 | 186.44 | wind | 1 | 14400 | < th | dose dependent | rect. | 19 | 4 |
| 269 | 186.49 | temperature | 20 | 14400 | < th | dose dependent | rect. | 15 | 19 |
| 295 | 186.56 | temperature | 20 | 14400 | < th | dose dependent | rect. | 8 | 23 |
| 315 | 186.62 | temperature | 20 | 14400 | < th | dose dependent | no | NA | NA |
| 347 | 186.72 | temperature | 20 | 43200 | < th | dose independent | rect. | 23 | 1 |
| 352 | 186.72 | radiation | 1 | 43200 | < th | dose dependent | rect. | 6 | 23 |
| 353 | 186.73 | radiation | 1 | 14400 | < th | dose dependent | sin | 12 | NA |
| 388 | 186.84 | radiation | 1 | 14400 | < th | dose dependent | rect. | 17 | 21 |
| 402 | 186.89 | temperature | 20 | 14400 | < th | dose independent | rect. | 3 | 15 |
| 410 | 186.97 | radiation | 10 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 427 | 187.09 | temperature | 20 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 432 | 187.11 | radiation | 1 | 43200 | < th | dose dependent | rect. | 6 | 17 |
| 434 | 187.12 | radiation | 1 | 43200 | < th | dose dependent | rect. | 6 | 13 |
| 437 | 187.13 | temperature | 20 | 14400 | > th | dose independent | rect. | 3 | 15 |
| 465 | 187.30 | temperature | 20 | 43200 | < th | dose independent | rect. | 22 | 4 |
| 478 | 187.39 | radiation | 10 | 14400 | < th | dose dependent | rect. | 9 | 3 |
| 479 | 187.41 | temperature | 20 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 521 | 187.57 | humidity | 90 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 573 | 187.78 | temperature | 20 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 580 | 187.79 | temperature | 20 | 14400 | < th | dose independent | sin | 3 | NA |
| 581 | 187.79 | temperature | 20 | 43200 | > th | dose independent | rect. | 22 | 4 |
| 648 | 188.01 | temperature | 20 | 43200 | < th | dose independent | rect. | 21 | 10 |
| 653 | 188.03 | radiation | 1 | 14400 | < th | dose dependent | rect. | 13 | 18 |
| 664 | 188.07 | temperature | 20 | 14400 | < th | dose independent | rect. | 5 | 6 |
| 674 | 188.11 | humidity | 90 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 703 | 188.21 | wind | 7 | 14400 | > th | dose dependent | rect. | 6 | 4 |
| 733 | 188.30 | radiation | 1 | 43200 | < th | dose dependent | sin | 22 | NA |
| 740 | 188.32 | humidity | 70 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 745 | 188.33 | temperature | 20 | 14400 | > th | dose independent | sin | 3 | NA |
| 747 | 188.34 | temperature | 20 | 43200 | > th | dose independent | rect. | 21 | 10 |
| 756 | 188.36 | wind | 1 | 43200 | < th | dose independent | rect. | 22 | 8 |
| 782 | 188.42 | temperature | 20 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 795 | 188.45 | temperature | 20 | 43200 | < th | dose independent | sin | 10 | NA |
| 862 | 188.55 | humidity | 60 | 43200 | > th | dose independent | rect. | 8 | 3 |
| 940 | 188.68 | temperature | 20 | 43200 | > th | dose independent | sin | 10 | NA |