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Os03g0733800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Endoplasmic reticulum oxidoreductin 1 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.9 (0.024) R2 : 0.19
β1 : -0.842 (0.0877) R2dD : 0.17 R2D : 0.181
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.1 (0.0511) R2dN8 : 0.00918 R2N8 : 0.0203
σ : 0.45
deviance : 92.6
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
66.21 0.382 11 -1.26 0.511 -0.69 -0.127 0.646 -0.0719 10.1 19.4 1970 -- --
66.63 0.38 10.9 -1.2 0.532 -0.811 -0.14 -- -0.0607 10.1 19.2 2130 -- --
66.22 0.379 11 -1.26 0.51 -0.713 -- 0.625 -0.0712 10.1 19.2 1986 -- --
66.65 0.38 10.9 -1.25 0.501 -0.839 -- -- -0.0609 10.3 19.2 2697 -- --
80.35 0.417 11 -1.24 -- -0.757 -- 0.748 -0.055 -- 19.04 1629 -- --
78.16 0.414 10.9 -0.831 0.487 -- -0.136 -- 0.101 10 -- -- -- --
78.23 0.414 10.9 -0.836 0.488 -- -- -- 0.101 10.1 -- -- -- --
79.88 0.416 11 -1.3 -- -1.02 -- -- -0.076 -- 18.31 3008 -- --
94.13 0.452 10.9 -- 0.531 -0.225 -- -- 0.124 10.1 22.4 682 -- --
92.6 0.45 10.9 -0.842 -- -- -- -- 0.1 -- -- -- -- --
96.65 0.46 10.9 -- 0.492 -- -- -- 0.194 10.2 -- -- -- --
106.64 0.481 10.9 -- -- 0.326 -- -- 0.285 -- 25.75 785 -- --
111.32 0.492 10.9 -- -- -- -- -- 0.194 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 62.87 humidity 80.0 14400 > th dose dependent rect. 6 1
2 63.34 radiation 10.0 4320 < th dose dependent rect. 18 11
5 63.52 wind 1.0 1440 < th dose dependent rect. 6 1
8 63.99 humidity 90.0 14400 < th dose independent rect. 6 1
9 64.00 temperature 20.0 1440 > th dose independent rect. 6 1
10 64.29 temperature 20.0 1440 < th dose independent rect. 5 2
12 64.49 radiation 10.0 4320 > th dose dependent rect. 6 1
27 64.71 radiation 1.0 4320 > th dose independent rect. 18 12
28 64.80 radiation 10.0 4320 < th dose dependent rect. 18 2
38 65.10 humidity 80.0 14400 > th dose dependent rect. 2 6
44 65.15 radiation 10.0 4320 < th dose dependent rect. 18 8
48 65.18 humidity 80.0 14400 > th dose dependent rect. 22 10
80 65.37 radiation 1.0 4320 < th dose independent rect. 18 12
82 65.38 humidity 90.0 14400 > th dose independent rect. 5 2
90 65.48 temperature 20.0 1440 < th dose independent rect. 22 2
92 65.51 temperature 20.0 1440 < th dose dependent rect. 1 3
95 65.52 temperature 20.0 1440 < th dose dependent rect. 3 1
98 65.53 radiation 30.0 4320 < th dose independent rect. 24 8
99 65.54 radiation 30.0 4320 < th dose independent rect. 2 6
102 65.55 radiation 30.0 4320 < th dose independent rect. 22 10
103 65.55 radiation 1.0 4320 > th dose independent rect. 18 15
109 65.57 radiation 30.0 4320 < th dose independent rect. 19 13
120 65.61 radiation 30.0 4320 < th dose independent rect. 17 15
127 65.64 temperature 20.0 1440 > th dose independent rect. 21 3
131 65.66 radiation 30.0 4320 < th dose independent rect. 6 2
143 65.70 temperature 20.0 1440 > th dose independent rect. 22 1
194 65.89 humidity 80.0 14400 > th dose dependent rect. 22 2
208 65.96 radiation 30.0 4320 > th dose independent rect. 7 1
232 66.00 radiation 40.0 4320 < th dose dependent rect. 1 5
247 66.05 radiation 1.0 14400 > th dose independent rect. 4 3
257 66.05 radiation 40.0 4320 < th dose independent rect. 15 18
260 66.06 radiation 1.0 14400 < th dose independent rect. 3 4
261 66.06 radiation 1.0 14400 < th dose independent rect. 24 7
277 66.09 wind 7.0 43200 < th dose independent rect. 8 2
286 66.13 humidity 80.0 14400 > th dose dependent sin 9 NA
289 66.14 radiation 1.0 4320 < th dose independent rect. 18 15
316 66.20 wind 1.0 1440 < th dose independent rect. 6 1
317 66.20 wind 7.0 43200 > th dose independent rect. 8 2
332 66.21 radiation 40.0 4320 < th dose dependent rect. 22 8
385 66.33 wind 5.0 43200 > th dose dependent rect. 8 2
395 66.35 humidity 80.0 14400 > th dose dependent rect. 20 8
397 66.36 radiation 1.0 4320 > th dose dependent rect. 18 1
456 66.47 precipitation 0.1 43200 > th dose independent rect. 3 1
459 66.47 humidity 60.0 14400 > th dose dependent rect. 22 2
503 66.53 temperature 20.0 1440 < th dose independent rect. 21 12
507 66.54 precipitation 0.1 43200 < th dose independent rect. 3 1
510 66.54 precipitation 0.1 43200 < th dose dependent rect. 3 1
513 66.55 wind 1.0 43200 > th dose dependent rect. 10 1
554 66.60 humidity 80.0 43200 < th dose independent rect. 18 1
588 66.64 temperature 20.0 1440 > th dose independent rect. 21 12
594 66.65 radiation 1.0 14400 > th dose independent sin 10 NA
595 66.65 radiation 1.0 14400 < th dose independent sin 10 NA
598 66.66 wind 1.0 43200 > th dose independent rect. 9 1
609 66.67 wind 5.0 43200 > th dose dependent rect. 23 12
623 66.69 wind 3.0 43200 < th dose dependent rect. 4 1
640 66.72 radiation 1.0 14400 < th dose independent rect. 15 17
641 66.72 radiation 1.0 14400 > th dose independent rect. 18 23
649 66.74 radiation 1.0 14400 > th dose independent rect. 15 17
651 66.74 radiation 1.0 14400 < th dose independent rect. 18 23
682 66.78 radiation 1.0 14400 > th dose independent rect. 4 13
711 66.80 radiation 1.0 14400 < th dose independent rect. 24 17
717 66.81 radiation 1.0 14400 < th dose independent rect. 4 13
750 66.85 radiation 10.0 4320 < th dose independent rect. 17 1
751 66.85 wind 7.0 43200 < th dose independent rect. 23 12
752 66.85 wind 7.0 43200 < th dose independent rect. 21 14
758 66.86 wind 3.0 43200 < th dose independent rect. 10 1
763 66.86 wind 9.0 43200 < th dose dependent rect. 10 1
780 66.88 wind 7.0 43200 > th dose independent rect. 21 14
785 66.88 radiation 1.0 14400 < th dose independent rect. 11 21
786 66.88 wind 5.0 43200 < th dose dependent rect. 10 1
801 66.90 wind 7.0 43200 < th dose independent rect. 2 9
808 66.90 temperature 10.0 1440 > th dose dependent rect. 6 1
819 66.91 radiation 1.0 14400 > th dose independent rect. 11 21
826 66.92 temperature 20.0 1440 < th dose independent rect. 3 6
836 66.92 temperature 10.0 1440 > th dose dependent rect. 5 3
837 66.92 precipitation 0.1 43200 > th dose dependent rect. 1 7
839 66.93 temperature 20.0 1440 < th dose independent sin 9 NA
840 66.93 radiation 1.0 14400 > th dose independent rect. 4 8
862 66.94 wind 7.0 43200 > th dose independent rect. 23 12
877 66.95 precipitation 0.1 43200 < th dose independent rect. 1 7
885 66.95 temperature 30.0 1440 < th dose dependent rect. 5 3
889 66.95 precipitation 0.1 43200 < th dose dependent rect. 1 7
894 66.96 radiation 1.0 14400 < th dose independent rect. 24 12
912 66.97 radiation 1.0 4320 > th dose independent rect. 18 1
921 66.97 precipitation 0.1 43200 > th dose independent rect. 1 7
924 66.97 radiation 1.0 14400 < th dose independent rect. 4 8
954 66.97 radiation 1.0 14400 < th dose independent rect. 15 21