Os03g0732000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Isopentenyl/dimethylallyl diphosphate synthase (Fragment).
FiT-DB / Search/ Help/ Sample detail
|
Os03g0732000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Isopentenyl/dimethylallyl diphosphate synthase (Fragment).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 118.29 | 0.511 | 2.88 | 0.37 | 0.146 | -2.06 | 0.0746 | 21.3 | 0.0475 | 8.11 | 31.27 | 3 | -- | -- |
| 121.13 | 0.517 | 2.94 | -0.111 | 0.155 | 0.638 | 0.0792 | -- | 0.0523 | 7.9 | 31.27 | 3 | -- | -- |
| 117.71 | 0.509 | 2.88 | 0.359 | 0.145 | -2.22 | -- | 23.2 | 0.0496 | 7.75 | 31.37 | 3 | -- | -- |
| 120.42 | 0.514 | 2.94 | -0.107 | 0.151 | 0.897 | -- | -- | 0.0505 | 7.74 | 32.48 | 2 | -- | -- |
| 118.83 | 0.51 | 2.88 | 0.369 | -- | -2.33 | -- | 23.8 | 0.0508 | -- | 31.4 | 3 | -- | -- |
| 123.39 | 0.521 | 2.94 | -0.0899 | 0.138 | -- | 0.172 | -- | 0.0388 | 9.46 | -- | -- | -- | -- |
| 123.48 | 0.52 | 2.94 | -0.0844 | 0.141 | -- | -- | -- | 0.0385 | 8.89 | -- | -- | -- | -- |
| 121.6 | 0.516 | 2.94 | -0.104 | -- | 0.889 | -- | -- | 0.052 | -- | 32.56 | 2 | -- | -- |
| 120.71 | 0.514 | 2.93 | -- | 0.15 | 0.884 | -- | -- | 0.0621 | 7.82 | 32.5 | 2 | -- | -- |
| 124.61 | 0.522 | 2.94 | -0.0844 | -- | -- | -- | -- | 0.0395 | -- | -- | -- | -- | -- |
| 123.67 | 0.52 | 2.94 | -- | 0.141 | -- | -- | -- | 0.0479 | 8.93 | -- | -- | -- | -- |
| 121.87 | 0.516 | 2.94 | -- | -- | 0.881 | -- | -- | 0.0633 | -- | 32.59 | 2 | -- | -- |
| 124.8 | 0.521 | 2.94 | -- | -- | -- | -- | -- | 0.0488 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 105.44 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 13 | 1 |
| 15 | 112.73 | temperature | 30.0 | 30 | > th | dose independent | rect. | 13 | 1 |
| 17 | 113.45 | radiation | 40.0 | 10 | > th | dose independent | rect. | 13 | 21 |
| 20 | 113.79 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 14 | 1 |
| 24 | 113.88 | temperature | 30.0 | 90 | > th | dose dependent | rect. | 12 | 1 |
| 26 | 113.99 | radiation | 40.0 | 10 | > th | dose dependent | rect. | 13 | 21 |
| 29 | 114.11 | radiation | 40.0 | 10 | > th | dose independent | sin | 12 | NA |
| 45 | 114.69 | radiation | 40.0 | 10 | > th | dose dependent | sin | 12 | NA |
| 49 | 114.84 | radiation | 40.0 | 10 | > th | dose dependent | rect. | 9 | 1 |
| 69 | 114.92 | wind | 1.0 | 10 | < th | dose independent | rect. | 7 | 3 |
| 71 | 114.94 | humidity | 60.0 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 84 | 114.94 | humidity | 60.0 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 97 | 114.97 | humidity | 60.0 | 90 | < th | dose independent | rect. | 17 | 17 |
| 113 | 114.99 | humidity | 60.0 | 90 | < th | dose dependent | rect. | 17 | 17 |
| 119 | 115.01 | humidity | 60.0 | 270 | < th | dose independent | rect. | 8 | 1 |
| 146 | 115.01 | humidity | 60.0 | 10 | < th | dose independent | rect. | 17 | 17 |
| 149 | 115.01 | humidity | 60.0 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 212 | 115.08 | humidity | 60.0 | 10 | < th | dose independent | rect. | 9 | 1 |
| 244 | 115.08 | humidity | 60.0 | 10 | < th | dose dependent | rect. | 17 | 17 |
| 309 | 115.10 | wind | 1.0 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 311 | 115.10 | humidity | 60.0 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 420 | 115.27 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 6 | 3 |
| 437 | 115.42 | wind | 1.0 | 10 | < th | dose dependent | rect. | 7 | 9 |
| 440 | 115.43 | wind | 1.0 | 10 | < th | dose dependent | rect. | 7 | 7 |
| 453 | 115.45 | radiation | 40.0 | 10 | > th | dose independent | rect. | 9 | 1 |
| 553 | 115.67 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 4 | 5 |
| 611 | 115.89 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 20 | 13 |
| 613 | 115.90 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 22 | 11 |
| 770 | 116.42 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 2 | 1 |
| 794 | 116.47 | temperature | 25.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 827 | 116.54 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 830 | 116.56 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 831 | 116.57 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 880 | 116.67 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 883 | 116.67 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 887 | 116.67 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 889 | 116.67 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 894 | 116.67 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 895 | 116.67 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 896 | 116.67 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 901 | 116.67 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 908 | 116.70 | wind | 9.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 916 | 116.77 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 934 | 116.82 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 969 | 116.91 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 970 | 116.92 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 974 | 116.93 | radiation | 40.0 | 90 | > th | dose dependent | rect. | 12 | 1 |