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Os03g0729000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.11 (0.0519) R2 : 0.768
β1 : -- (--) R2dD : -- R2D : --
β2 : 3.07 (0.196) R2dC : 0.294 R2C : -0.68
β3 : -5.65 (0.164) R2dE : 1.41 R2E : 0.411
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 1.04 (0.109) R2dN8 : 0.0568 R2N8 : 0.0327
σ : 0.975
deviance : 438.22
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_____
C
peak time of C : 2.79
E
wheather : wind
threshold : 6.728
memory length : 284
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 14.2
open length of G : 14.6

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
420.98 0.964 8.14 -0.473 2.63 -5.08 -0.485 -1.69 0.935 3.37 6.79 273 14.1 14.9
424.95 0.96 8.12 -0.367 2.62 -5.21 -1.85 -- 0.937 3.08 6.704 296 13.9 14.8
418.64 0.953 8.15 -0.399 2.63 -5.13 -- -1.63 0.937 3.33 6.7 281 14.1 14.8
436.29 0.973 8.1 -0.316 2.9 -5.42 -- -- 1.01 3.03 6.799 284 14.1 14.7
535.43 1.08 8.15 -0.284 -- -3.8 -- -1.64 1.06 -- 7.498 216 13.6 15.1
662.48 1.21 8.06 -0.917 4.29 -- 2.39 -- 0.796 10.3 -- -- -- --
685.55 1.23 8.06 -0.823 4.28 -- -- -- 0.801 10.3 -- -- -- --
549.71 1.09 8.14 -0.486 -- -3.72 -- -- 0.915 -- 7.409 220 13.5 15
438.22 0.975 8.11 -- 3.07 -5.65 -- -- 1.04 2.79 6.728 284 14.2 14.6
1801.55 1.98 8.17 -0.887 -- -- -- -- 0.79 -- -- -- -- --
703.38 1.24 8.04 -- 4.29 -- -- -- 0.893 10.3 -- -- -- --
555.67 1.1 8.15 -- -- -3.74 -- -- 0.962 -- 7.4 223 13.5 14.9
1822.33 1.99 8.15 -- -- -- -- -- 0.889 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 426.36 wind 7.0 270 < th dose independent rect. 14 15
2 433.46 temperature 10.0 270 > th dose dependent rect. 14 15
17 459.14 temperature 10.0 10 > th dose dependent rect. 16 14
18 459.23 temperature 30.0 270 < th dose independent rect. 17 8
20 460.16 radiation 1.0 270 < th dose independent rect. 17 8
22 460.66 radiation 1.0 270 < th dose dependent rect. 11 14
28 461.24 radiation 1.0 270 < th dose dependent rect. 17 8
31 461.54 wind 7.0 270 < th dose independent rect. 1 18
35 462.12 humidity 60.0 270 > th dose independent rect. 17 8
39 462.90 humidity 70.0 90 > th dose independent rect. 19 8
41 463.23 radiation 1.0 270 < th dose independent rect. 11 14
55 464.84 temperature 10.0 270 > th dose dependent rect. 13 6
62 466.22 wind 7.0 270 < th dose independent rect. 13 6
72 468.97 radiation 1.0 270 < th dose dependent rect. 5 20
79 470.31 wind 9.0 90 < th dose independent rect. 3 16
85 470.62 temperature 15.0 270 > th dose independent rect. 5 9
115 474.88 precipitation 0.1 90 < th dose independent rect. 3 16
116 474.88 precipitation 0.1 90 < th dose dependent rect. 3 16
123 475.43 temperature 10.0 90 > th dose independent rect. 19 8
127 475.43 atmosphere 995.0 90 > th dose independent rect. 19 8
133 475.43 temperature 10.0 90 > th dose independent rect. 3 16
134 475.43 atmosphere 1015.0 90 < th dose independent rect. 3 16
140 475.47 temperature 10.0 270 > th dose dependent rect. 1 18
142 476.15 precipitation 0.1 270 < th dose independent rect. 5 9
143 476.15 precipitation 0.1 270 < th dose dependent rect. 5 9
146 476.32 precipitation 0.1 270 < th dose independent rect. 1 18
147 476.32 precipitation 0.1 270 < th dose dependent rect. 1 18
149 476.45 wind 9.0 90 < th dose independent rect. 19 8
155 477.65 temperature 10.0 270 > th dose independent rect. 19 6
158 477.65 atmosphere 995.0 270 > th dose independent rect. 19 6
164 477.65 temperature 10.0 270 > th dose independent rect. 1 18
165 477.65 atmosphere 1015.0 270 < th dose independent rect. 1 18
174 477.71 atmosphere 995.0 270 > th dose independent rect. 5 9
175 477.71 atmosphere 1015.0 270 < th dose independent rect. 5 9
176 477.71 temperature 10.0 270 > th dose independent rect. 14 15
177 477.74 precipitation 0.1 90 < th dose independent rect. 19 8
178 477.74 precipitation 0.1 90 < th dose dependent rect. 19 8
188 478.97 wind 9.0 270 < th dose independent rect. 19 6
224 480.80 wind 9.0 270 < th dose independent rect. 5 9
231 481.11 radiation 1.0 270 < th dose dependent sin 16 NA
233 481.20 temperature 25.0 270 > th dose independent rect. 14 5
241 481.81 precipitation 0.1 270 < th dose independent rect. 14 15
242 481.81 precipitation 0.1 270 < th dose dependent rect. 14 15
254 482.26 precipitation 0.1 270 < th dose independent rect. 19 6
255 482.26 precipitation 0.1 270 < th dose dependent rect. 19 6
289 484.68 humidity 50.0 270 > th dose independent rect. 6 18
307 485.78 radiation 1.0 270 > th dose independent sin 16 NA
314 486.55 wind 1.0 270 > th dose independent rect. 19 6
315 486.59 radiation 1.0 270 < th dose independent sin 16 NA
351 488.66 temperature 15.0 10 > th dose dependent rect. 16 4
358 489.12 radiation 40.0 270 < th dose independent rect. 14 15
385 489.76 wind 1.0 270 > th dose independent rect. 13 6
424 491.44 radiation 40.0 270 < th dose dependent rect. 24 9
425 491.49 wind 7.0 270 < th dose independent rect. 15 2
427 491.52 temperature 30.0 90 < th dose dependent rect. 19 8
429 491.65 radiation 1.0 270 > th dose independent rect. 14 5
442 491.85 radiation 1.0 270 > th dose independent rect. 4 10
465 492.51 temperature 25.0 10 > th dose independent rect. 16 4
469 492.63 atmosphere 995.0 90 > th dose independent rect. 3 16
473 492.72 radiation 10.0 10 < th dose independent rect. 3 17
508 494.66 wind 9.0 270 < th dose dependent rect. 24 7
518 495.01 humidity 50.0 270 > th dose dependent rect. 24 7
520 495.09 atmosphere 995.0 270 > th dose independent rect. 1 18
530 495.49 radiation 10.0 270 < th dose dependent rect. 24 8
531 495.52 temperature 30.0 270 < th dose independent rect. 6 18
533 495.56 precipitation 0.1 270 < th dose independent rect. 13 6
534 495.56 precipitation 0.1 270 < th dose dependent rect. 13 6
544 495.74 humidity 50.0 270 > th dose dependent rect. 24 9
552 495.98 wind 9.0 270 < th dose dependent rect. 13 6
562 496.25 temperature 10.0 270 > th dose independent rect. 13 6
564 496.25 atmosphere 1010.0 270 < th dose independent rect. 13 6
566 496.25 temperature 10.0 270 > th dose independent rect. 19 18
567 496.25 atmosphere 995.0 270 > th dose independent rect. 19 18
568 496.28 wind 9.0 270 < th dose dependent rect. 14 16
575 496.40 radiation 10.0 270 < th dose independent rect. 24 7
586 496.64 wind 9.0 10 < th dose independent rect. 3 17
592 496.98 precipitation 0.1 10 < th dose independent rect. 3 17
593 496.98 precipitation 0.1 10 < th dose dependent rect. 3 17
604 497.47 humidity 50.0 90 > th dose dependent rect. 19 8
626 497.92 humidity 50.0 270 > th dose independent rect. 5 9
631 498.10 temperature 10.0 270 > th dose dependent rect. 24 7
636 498.45 wind 9.0 270 < th dose independent rect. 19 18
696 499.20 atmosphere 1010.0 270 < th dose independent rect. 24 7
726 499.90 wind 1.0 270 > th dose independent rect. 11 8
728 499.98 temperature 10.0 10 > th dose independent rect. 20 7
729 499.98 temperature 30.0 10 < th dose independent rect. 20 7
730 499.98 humidity 50.0 10 > th dose independent rect. 20 7
733 499.98 atmosphere 995.0 10 > th dose independent rect. 20 7
734 499.98 radiation 1.0 10 < th dose independent rect. 20 7
739 499.98 temperature 10.0 10 > th dose independent rect. 3 17
741 499.98 atmosphere 1015.0 10 < th dose independent rect. 3 17
742 499.98 radiation 1.0 10 < th dose dependent rect. 20 7
748 500.06 wind 7.0 10 < th dose independent rect. 16 15
751 500.08 humidity 50.0 270 > th dose independent rect. 19 18
754 500.22 temperature 30.0 270 < th dose dependent rect. 17 7
757 500.34 radiation 20.0 10 < th dose dependent rect. 3 17
760 500.42 radiation 40.0 90 < th dose dependent rect. 3 16
762 500.48 precipitation 0.1 270 < th dose independent rect. 19 18
764 500.48 precipitation 0.1 270 < th dose dependent rect. 19 18
769 500.56 wind 9.0 10 < th dose independent rect. 20 7
781 500.88 precipitation 0.1 270 < th dose independent rect. 24 7
782 500.88 precipitation 0.1 270 < th dose dependent rect. 24 7
791 501.22 precipitation 0.1 10 < th dose independent rect. 20 7
792 501.22 precipitation 0.1 10 < th dose dependent rect. 20 7
797 501.31 humidity 50.0 270 > th dose dependent rect. 18 6
806 501.54 wind 7.0 270 < th dose independent rect. 24 7
811 501.65 humidity 70.0 270 > th dose independent rect. 24 7
832 501.80 temperature 15.0 270 > th dose independent rect. 24 7
833 501.80 radiation 30.0 270 < th dose independent rect. 24 7
841 501.82 temperature 30.0 270 < th dose independent rect. 24 7
842 501.82 humidity 50.0 270 > th dose independent rect. 24 7
844 501.82 atmosphere 995.0 270 > th dose independent rect. 24 7
846 501.82 temperature 10.0 270 > th dose independent rect. 7 17
853 501.97 atmosphere 1015.0 270 < th dose independent rect. 14 15
940 504.02 temperature 10.0 1440 > th dose independent rect. 20 7
943 504.02 temperature 30.0 1440 < th dose independent rect. 20 7
947 504.02 humidity 50.0 1440 > th dose independent rect. 20 7
953 504.02 atmosphere 995.0 1440 > th dose independent rect. 20 7
954 504.02 radiation 1.0 1440 < th dose independent rect. 20 7
974 504.02 temperature 10.0 1440 > th dose independent rect. 3 17
981 504.07 radiation 40.0 1440 < th dose dependent rect. 20 7