Os03g0726900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0726900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 76.28 | 0.41 | 7.21 | -0.959 | 0.716 | -1.01 | -0.0481 | 0.662 | -0.13 | 22.6 | 49.99 | 4268 | -- | -- |
| 76.6 | 0.408 | 7.22 | -1 | 0.709 | -0.812 | -0.0778 | -- | -0.13 | 22.6 | 50.05 | 4268 | -- | -- |
| 76.28 | 0.407 | 7.21 | -0.957 | 0.716 | -1.01 | -- | 0.657 | -0.13 | 22.6 | 50 | 4268 | -- | -- |
| 76.56 | 0.408 | 7.22 | -1.02 | 0.706 | -0.791 | -- | -- | -0.122 | 22.6 | 49.83 | 4276 | -- | -- |
| 106.36 | 0.48 | 7.19 | -1.04 | -- | -0.976 | -- | 0.274 | -0.107 | -- | 49.85 | 4497 | -- | -- |
| 88.37 | 0.441 | 7.2 | -1.34 | 0.669 | -- | -0.145 | -- | -0.0386 | 22.4 | -- | -- | -- | -- |
| 88.45 | 0.44 | 7.2 | -1.34 | 0.669 | -- | -- | -- | -0.0382 | 22.4 | -- | -- | -- | -- |
| 106.34 | 0.48 | 7.2 | -1.05 | -- | -0.982 | -- | -- | -0.105 | -- | 49.01 | 4557 | -- | -- |
| 99.09 | 0.464 | 7.2 | -- | 0.764 | -1.14 | -- | -- | -0.0158 | 22.6 | 49 | 4332 | -- | -- |
| 115.87 | 0.503 | 7.19 | -1.32 | -- | -- | -- | -- | -0.0358 | -- | -- | -- | -- | -- |
| 135.5 | 0.545 | 7.17 | -- | 0.662 | -- | -- | -- | 0.111 | 22.3 | -- | -- | -- | -- |
| 130.09 | 0.531 | 7.19 | -- | -- | -1.22 | -- | -- | -0.0251 | -- | 49.95 | 4416 | -- | -- |
| 162.18 | 0.594 | 7.15 | -- | -- | -- | -- | -- | 0.111 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 73.85 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 9 | 2 |
| 5 | 74.47 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 22 | 13 |
| 10 | 74.71 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 23 | 75.01 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 9 | 2 |
| 26 | 75.03 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 19 | 17 |
| 31 | 75.05 | humidity | 60.0 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 53 | 75.22 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 8 | 12 |
| 60 | 75.28 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 8 | 6 |
| 70 | 75.36 | humidity | 70.0 | 4320 | < th | dose dependent | rect. | 18 | 19 |
| 77 | 75.46 | humidity | 60.0 | 4320 | > th | dose independent | rect. | 18 | 19 |
| 150 | 75.72 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 3 | 8 |
| 164 | 75.75 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 16 | 18 |
| 183 | 75.78 | humidity | 80.0 | 4320 | < th | dose dependent | sin | 7 | NA |
| 203 | 75.81 | humidity | 60.0 | 4320 | > th | dose independent | sin | 8 | NA |
| 274 | 75.94 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 277 | 75.97 | humidity | 70.0 | 4320 | < th | dose independent | sin | 8 | NA |
| 278 | 75.97 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 13 | 5 |
| 314 | 76.13 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 13 | 4 |
| 317 | 76.14 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 13 | 22 |
| 321 | 76.17 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 11 | 18 |
| 323 | 76.18 | humidity | 50.0 | 4320 | < th | dose independent | sin | 18 | NA |
| 330 | 76.19 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 11 | 6 |
| 338 | 76.20 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 11 | 9 |
| 361 | 76.21 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 11 | 7 |
| 380 | 76.22 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 11 | 15 |
| 385 | 76.22 | humidity | 60.0 | 14400 | < th | dose dependent | sin | 15 | NA |
| 406 | 76.24 | humidity | 50.0 | 4320 | > th | dose independent | sin | 18 | NA |
| 413 | 76.24 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 7 | 3 |
| 439 | 76.28 | humidity | 50.0 | 4320 | < th | dose dependent | sin | 12 | NA |
| 492 | 76.32 | humidity | 50.0 | 4320 | < th | dose independent | no | NA | NA |
| 660 | 76.36 | wind | 1.0 | 1440 | < th | dose independent | rect. | 8 | 12 |
| 693 | 76.40 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 724 | 76.43 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 1 | 21 |
| 748 | 76.44 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 2 | 16 |
| 782 | 76.45 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 19 | 23 |
| 785 | 76.46 | humidity | 50.0 | 4320 | > th | dose independent | no | NA | NA |
| 803 | 76.46 | humidity | 50.0 | 4320 | > th | dose independent | rect. | 21 | 21 |
| 900 | 76.52 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 16 | 2 |
| 908 | 76.53 | humidity | 50.0 | 4320 | < th | dose independent | rect. | 16 | 23 |
| 909 | 76.53 | wind | 3.0 | 1440 | < th | dose dependent | rect. | 10 | 3 |
| 945 | 76.59 | humidity | 60.0 | 14400 | < th | dose independent | sin | 11 | NA |
| 948 | 76.59 | wind | 1.0 | 1440 | < th | dose independent | rect. | 8 | 7 |
| 960 | 76.61 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 5 | 4 |
| 964 | 76.61 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 5 | 4 |