Os03g0724500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0724500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 280.85 | 0.787 | 5.89 | 1.69 | 1.82 | 1.54 | 0.805 | 4.52 | -0.201 | 18 | 70 | 4376 | 10 | 3.02 |
| 314.74 | 0.826 | 5.93 | 1.72 | 1.8 | 1.68 | 0.804 | -- | -0.216 | 17.9 | 69.66 | 4325 | 10 | 3.25 |
| 282.39 | 0.783 | 5.89 | 1.68 | 1.83 | 1.54 | -- | 4.5 | -0.199 | 18 | 69.94 | 4377 | 10 | 3.03 |
| 314.82 | 0.826 | 5.92 | 1.52 | 1.86 | 1.66 | -- | -- | -0.25 | 18 | 69.38 | 4328 | 9.93 | 3.33 |
| 367.88 | 0.893 | 5.88 | 1.69 | -- | 2.07 | -- | 5.03 | -0.388 | -- | 71.54 | 2164 | 10.3 | 2.7 |
| 384.66 | 0.919 | 5.94 | 1.76 | 1.8 | -- | 0.775 | -- | -0.285 | 17.9 | -- | -- | -- | -- |
| 386.09 | 0.92 | 5.94 | 1.75 | 1.8 | -- | -- | -- | -0.282 | 18 | -- | -- | -- | -- |
| 338.81 | 0.857 | 5.95 | 1.4 | -- | 2.73 | -- | -- | -0.541 | -- | 79 | 2270 | 8.06 | 5.12 |
| 374.35 | 0.901 | 5.93 | -- | 1.84 | 1.78 | -- | -- | -0.236 | 18 | 69 | 4328 | 9.86 | 3.23 |
| 554.62 | 1.1 | 5.91 | 1.7 | -- | -- | -- | -- | -0.324 | -- | -- | -- | -- | -- |
| 466.64 | 1.01 | 5.98 | -- | 1.78 | -- | -- | -- | -0.477 | 18 | -- | -- | -- | -- |
| 387.43 | 0.917 | 5.96 | -- | -- | 3.04 | -- | -- | -0.54 | -- | 78 | 2276 | 7.45 | 5.63 |
| 630.42 | 1.17 | 5.95 | -- | -- | -- | -- | -- | -0.512 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 277.59 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 9 |
| 2 | 277.59 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 9 |
| 7 | 278.33 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 8 | 278.38 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 9 |
| 9 | 278.70 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 10 | 278.73 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 11 |
| 11 | 278.76 | wind | 1.0 | 14400 | > th | dose independent | rect. | 4 | 3 |
| 25 | 280.31 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 3 |
| 28 | 280.82 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 10 |
| 36 | 282.32 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 7 |
| 45 | 282.81 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 23 | 6 |
| 51 | 283.22 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 6 |
| 59 | 283.80 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 10 | 3 |
| 80 | 284.82 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 82 | 284.92 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 85 | 284.98 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 86 | 284.98 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 87 | 285.01 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 10 | 3 |
| 91 | 285.14 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 2 | 4 |
| 102 | 285.48 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 103 | 285.48 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 125 | 286.30 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 177 | 288.14 | wind | 1.0 | 14400 | > th | dose independent | rect. | 2 | 8 |
| 180 | 288.22 | wind | 1.0 | 14400 | < th | dose independent | rect. | 2 | 8 |
| 185 | 288.33 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 192 | 288.64 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 5 |
| 200 | 288.82 | humidity | 60.0 | 4320 | > th | dose dependent | rect. | 10 | 2 |
| 216 | 289.10 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 5 |
| 217 | 289.10 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 5 |
| 219 | 289.16 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 23 | 10 |
| 220 | 289.24 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 226 | 289.29 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 5 |
| 230 | 289.37 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 253 | 290.29 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 261 | 290.41 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 274 | 290.68 | humidity | 60.0 | 4320 | > th | dose dependent | rect. | 9 | 5 |
| 287 | 290.90 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 327 | 291.97 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 360 | 292.64 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 369 | 292.82 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 9 | 6 |
| 382 | 292.99 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 1 | NA |
| 383 | 292.99 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 1 | NA |
| 415 | 293.22 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 1 | NA |
| 421 | 293.34 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 8 | 9 |
| 422 | 293.36 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 6 | 8 |
| 437 | 293.43 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 10 | 3 |
| 440 | 293.47 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 13 | 4 |
| 453 | 293.68 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 10 | 3 |
| 477 | 293.96 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 486 | 294.06 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 522 | 294.52 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 9 | 2 |
| 539 | 294.74 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 3 | 11 |
| 543 | 294.75 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 23 | 15 |
| 587 | 294.92 | temperature | 30.0 | 14400 | < th | dose dependent | rect. | 9 | 5 |
| 660 | 295.37 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 663 | 295.39 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 664 | 295.39 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 2 | 8 |
| 710 | 295.66 | temperature | 15.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 764 | 295.96 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 3 |
| 784 | 296.11 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 8 | 6 |
| 819 | 296.34 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 18 | 3 |
| 825 | 296.38 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 24 | 1 |
| 845 | 296.54 | humidity | 70.0 | 4320 | < th | dose independent | sin | 4 | NA |
| 875 | 296.71 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 908 | 296.93 | wind | 1.0 | 14400 | > th | dose dependent | sin | 8 | NA |
| 994 | 297.29 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 21 | 17 |