Os03g0723700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0723700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 131 | 0.538 | 9.24 | 0.864 | 0.909 | -1.09 | -0.51 | 2.25 | 0.351 | 7.73 | 25.54 | 904 | -- | -- |
| 136.98 | 0.545 | 9.31 | 0.272 | 1.06 | -0.936 | -0.899 | -- | 0.108 | 7.77 | 25.51 | 1025 | -- | -- |
| 131.57 | 0.534 | 9.23 | 0.911 | 0.912 | -1.08 | -- | 2.49 | 0.363 | 7.89 | 25.55 | 904 | -- | -- |
| 139.46 | 0.55 | 9.31 | 0.244 | 1.07 | -0.919 | -- | -- | 0.136 | 7.94 | 25.58 | 1032 | -- | -- |
| 154.5 | 0.579 | 9.21 | 1.14 | -- | -1.49 | -- | 2.92 | 0.544 | -- | 25.63 | 706 | -- | -- |
| 162.81 | 0.598 | 9.37 | -0.0297 | 1.24 | -- | -0.594 | -- | -0.186 | 8.63 | -- | -- | -- | -- |
| 163.93 | 0.6 | 9.37 | -0.0477 | 1.24 | -- | -- | -- | -0.186 | 8.71 | -- | -- | -- | -- |
| 166.86 | 0.602 | 9.3 | 0.357 | -- | -1.32 | -- | -- | 0.311 | -- | 25.6 | 705 | -- | -- |
| 140.62 | 0.552 | 9.32 | -- | 1.07 | -0.88 | -- | -- | 0.0953 | 7.98 | 25.6 | 1031 | -- | -- |
| 250.51 | 0.74 | 9.41 | -0.0453 | -- | -- | -- | -- | -0.175 | -- | -- | -- | -- | -- |
| 163.99 | 0.599 | 9.37 | -- | 1.24 | -- | -- | -- | -0.18 | 8.71 | -- | -- | -- | -- |
| 169.8 | 0.607 | 9.31 | -- | -- | -1.28 | -- | -- | 0.249 | -- | 25.53 | 705 | -- | -- |
| 250.56 | 0.739 | 9.41 | -- | -- | -- | -- | -- | -0.17 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 129.69 | temperature | 25 | 720 | < th | dose independent | rect. | 14 | 19 |
| 4 | 130.08 | temperature | 25 | 720 | > th | dose independent | rect. | 15 | 18 |
| 5 | 130.10 | temperature | 25 | 720 | > th | dose independent | rect. | 15 | 10 |
| 10 | 130.49 | temperature | 25 | 720 | < th | dose independent | sin | 16 | NA |
| 29 | 131.14 | temperature | 25 | 720 | < th | dose independent | rect. | 10 | 21 |
| 49 | 131.56 | temperature | 25 | 720 | > th | dose independent | sin | 16 | NA |
| 52 | 131.57 | temperature | 25 | 720 | > th | dose dependent | sin | 11 | NA |
| 57 | 131.71 | temperature | 25 | 720 | < th | dose independent | rect. | 14 | 12 |
| 79 | 131.97 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 84 | 132.09 | temperature | 25 | 1440 | < th | dose independent | rect. | 21 | 4 |
| 90 | 132.11 | temperature | 25 | 720 | < th | dose independent | rect. | 10 | 16 |
| 91 | 132.14 | temperature | 25 | 1440 | > th | dose independent | rect. | 20 | 5 |
| 95 | 132.15 | temperature | 25 | 1440 | > th | dose independent | rect. | 21 | 3 |
| 99 | 132.17 | temperature | 25 | 720 | < th | dose independent | rect. | 17 | 6 |
| 167 | 133.16 | temperature | 25 | 1440 | < th | dose independent | rect. | 22 | 2 |
| 194 | 133.49 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 12 |
| 199 | 133.55 | temperature | 25 | 720 | > th | dose independent | rect. | 7 | 20 |
| 225 | 133.76 | temperature | 25 | 720 | > th | dose independent | rect. | 17 | 2 |
| 227 | 133.82 | temperature | 25 | 1440 | > th | dose dependent | rect. | 20 | 5 |
| 233 | 133.91 | temperature | 25 | 1440 | > th | dose independent | rect. | 21 | 15 |
| 320 | 134.64 | radiation | 1 | 720 | < th | dose independent | rect. | 15 | 8 |
| 340 | 134.75 | temperature | 25 | 1440 | > th | dose independent | rect. | 19 | 14 |
| 350 | 134.80 | temperature | 25 | 1440 | < th | dose independent | rect. | 21 | 15 |
| 352 | 134.81 | wind | 7 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 366 | 134.92 | temperature | 25 | 720 | > th | dose independent | rect. | 17 | 23 |
| 375 | 135.01 | wind | 7 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 382 | 135.04 | radiation | 1 | 720 | < th | dose independent | sin | 15 | NA |
| 390 | 135.06 | temperature | 25 | 720 | < th | dose independent | rect. | 3 | 23 |
| 395 | 135.11 | temperature | 25 | 720 | > th | dose independent | no | NA | NA |
| 396 | 135.11 | radiation | 1 | 720 | > th | dose independent | rect. | 15 | 4 |
| 406 | 135.11 | temperature | 25 | 720 | < th | dose independent | rect. | 5 | 23 |
| 463 | 135.41 | temperature | 25 | 720 | > th | dose independent | rect. | 21 | 23 |
| 465 | 135.43 | temperature | 25 | 4320 | > th | dose dependent | rect. | 17 | 8 |
| 491 | 135.55 | temperature | 25 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 509 | 135.63 | temperature | 25 | 720 | < th | dose independent | no | NA | NA |
| 521 | 135.67 | temperature | 25 | 720 | < th | dose independent | rect. | 1 | 23 |
| 530 | 135.72 | radiation | 1 | 720 | < th | dose dependent | rect. | 15 | 8 |
| 541 | 135.76 | radiation | 1 | 720 | < th | dose dependent | sin | 15 | NA |
| 556 | 135.85 | temperature | 25 | 720 | > th | dose independent | rect. | 15 | 5 |
| 623 | 136.18 | temperature | 25 | 4320 | > th | dose dependent | rect. | 17 | 3 |
| 664 | 136.32 | radiation | 1 | 720 | > th | dose independent | rect. | 8 | 11 |
| 685 | 136.38 | radiation | 1 | 720 | > th | dose independent | sin | 14 | NA |
| 778 | 136.78 | radiation | 1 | 720 | > th | dose independent | rect. | 17 | 1 |
| 800 | 136.90 | temperature | 25 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 885 | 137.23 | radiation | 1 | 720 | > th | dose independent | sin | 19 | NA |
| 935 | 137.41 | wind | 7 | 4320 | > th | dose dependent | rect. | 13 | 8 |
| 943 | 137.44 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 2 |
| 960 | 137.50 | temperature | 25 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 999 | 137.63 | radiation | 20 | 43200 | < th | dose independent | rect. | 7 | 1 |