Os03g0722100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0722100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16.92 | 0.193 | 11.8 | 0.205 | 0.236 | -0.0884 | -0.0958 | -0.819 | 0.151 | 1.33 | 24.72 | 1746 | -- | -- |
| 17.72 | 0.196 | 11.8 | -0.00621 | 0.231 | -0.153 | -0.0311 | -- | 0.111 | 0.954 | 24.79 | 2702 | -- | -- |
| 16.96 | 0.192 | 11.8 | 0.207 | 0.236 | -0.0892 | -- | -0.816 | 0.151 | 1.35 | 24.74 | 1745 | -- | -- |
| 17.61 | 0.195 | 11.8 | -0.0235 | 0.22 | -0.147 | -- | -- | 0.0822 | 1 | 24.8 | 2702 | -- | -- |
| 19.83 | 0.207 | 11.8 | 0.182 | -- | -0.19 | -- | -0.78 | 0.12 | -- | 24.8 | 2505 | -- | -- |
| 18.21 | 0.2 | 11.8 | 0.00628 | 0.235 | -- | -0.0967 | -- | 0.12 | 1.25 | -- | -- | -- | -- |
| 18.25 | 0.2 | 11.8 | 0.00963 | 0.235 | -- | -- | -- | 0.12 | 1.26 | -- | -- | -- | -- |
| 20.06 | 0.209 | 11.8 | -0.0539 | -- | -0.222 | -- | -- | 0.0657 | -- | 24.7 | 2491 | -- | -- |
| 17.63 | 0.196 | 11.8 | -- | 0.211 | -0.145 | -- | -- | 0.0831 | 1.18 | 24.77 | 2630 | -- | -- |
| 21.66 | 0.217 | 11.8 | 0.0188 | -- | -- | -- | -- | 0.125 | -- | -- | -- | -- | -- |
| 18.25 | 0.2 | 11.8 | -- | 0.235 | -- | -- | -- | 0.119 | 1.26 | -- | -- | -- | -- |
| 20.15 | 0.209 | 11.8 | -- | -- | -0.219 | -- | -- | 0.0671 | -- | 24.72 | 2487 | -- | -- |
| 21.67 | 0.217 | 11.8 | -- | -- | -- | -- | -- | 0.123 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 16.71 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 23 | 4 |
| 4 | 16.76 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 23 | 2 |
| 6 | 16.79 | wind | 1.0 | 1440 | < th | dose independent | rect. | 18 | 1 |
| 7 | 16.79 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 18 | 1 |
| 8 | 16.79 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 20 | 7 |
| 12 | 16.79 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 14 | 16.80 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 2 |
| 18 | 16.82 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 20 | 16.83 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 19 | 6 |
| 21 | 16.83 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 19 | 6 |
| 23 | 16.84 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 2 | 1 |
| 25 | 16.84 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 19 | 6 |
| 32 | 16.84 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 14 | 13 |
| 33 | 16.85 | wind | 1.0 | 1440 | > th | dose independent | rect. | 18 | 1 |
| 35 | 16.85 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 14 | 16 |
| 36 | 16.85 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 40 | 16.85 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 19 | 6 |
| 44 | 16.85 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 20 | 9 |
| 64 | 16.88 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 19 | 1 |
| 126 | 16.91 | temperature | 20.0 | 30 | > th | dose independent | rect. | 18 | 14 |
| 131 | 16.91 | temperature | 25.0 | 270 | < th | dose dependent | sin | 15 | NA |
| 139 | 16.92 | temperature | 25.0 | 1440 | < th | dose independent | sin | 13 | NA |
| 152 | 16.92 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 21 | 8 |
| 160 | 16.92 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 15 | 14 |
| 174 | 16.93 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 23 | 2 |
| 200 | 16.94 | temperature | 25.0 | 10 | < th | dose dependent | sin | 12 | NA |
| 265 | 16.98 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 286 | 16.98 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 8 | 21 |
| 288 | 16.99 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 298 | 16.99 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 20 | 20 |
| 304 | 16.99 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 307 | 16.99 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 21 | 4 |
| 350 | 17.00 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 8 | 19 |
| 352 | 17.00 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 399 | 17.02 | temperature | 10.0 | 10 | > th | dose dependent | sin | 11 | NA |
| 419 | 17.02 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 24 | 20 |
| 449 | 17.03 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 18 | 14 |
| 464 | 17.04 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 14 | 15 |
| 513 | 17.04 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 3 | 17 |
| 517 | 17.04 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 9 | 20 |
| 527 | 17.05 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 14 | 13 |
| 534 | 17.05 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 11 | 19 |
| 601 | 17.06 | temperature | 25.0 | 1440 | < th | dose dependent | sin | 14 | NA |
| 651 | 17.07 | wind | 3.0 | 1440 | < th | dose independent | rect. | 2 | 1 |
| 661 | 17.07 | temperature | 20.0 | 10 | < th | dose independent | rect. | 21 | 8 |
| 672 | 17.07 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 24 | 20 |
| 673 | 17.07 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 24 | 20 |
| 675 | 17.07 | temperature | 20.0 | 10 | > th | dose dependent | sin | 10 | NA |
| 719 | 17.07 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 24 | 20 |
| 722 | 17.08 | temperature | 25.0 | 1440 | > th | dose independent | sin | 14 | NA |
| 756 | 17.08 | temperature | 20.0 | 10 | > th | dose independent | rect. | 17 | 23 |
| 766 | 17.08 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 3 |
| 803 | 17.08 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 23 |
| 889 | 17.10 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 3 | 17 |
| 890 | 17.10 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 3 | 17 |
| 913 | 17.10 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 21 | 2 |
| 914 | 17.10 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 21 | 4 |
| 950 | 17.10 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 3 | 17 |
| 960 | 17.10 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 15 | 19 |
| 968 | 17.11 | temperature | 25.0 | 1440 | < th | dose independent | no | NA | NA |
| 989 | 17.11 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 5 | 23 |