Os03g0721700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF569 family protein.
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Os03g0721700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF569 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 215.01 | 0.689 | 2.83 | 0.164 | 0.265 | 0.806 | 0.615 | 2.01 | 0.00464 | 10.2 | 24.21 | 30 | -- | -- |
| 220.92 | 0.692 | 2.8 | 0.468 | 0.241 | 0.651 | 0.3 | -- | 0.0779 | 9.62 | 24.22 | 30 | -- | -- |
| 216.42 | 0.685 | 2.83 | 0.208 | 0.257 | 0.814 | -- | 1.85 | -0.0041 | 10.2 | 24.2 | 32 | -- | -- |
| 220.84 | 0.692 | 2.8 | 0.456 | 0.239 | 0.609 | -- | -- | 0.057 | 10 | 24.2 | 27 | -- | -- |
| 220.37 | 0.691 | 2.84 | 0.239 | -- | 0.751 | -- | 1.79 | 0.0152 | -- | 24.28 | 35 | -- | -- |
| 225.67 | 0.704 | 2.82 | 0.3 | 0.179 | -- | 0.47 | -- | -0.044 | 7.5 | -- | -- | -- | -- |
| 226.13 | 0.704 | 2.82 | 0.313 | 0.182 | -- | -- | -- | -0.0436 | 8.53 | -- | -- | -- | -- |
| 224.09 | 0.697 | 2.81 | 0.424 | -- | 0.512 | -- | -- | 0.0457 | -- | 24.2 | 31 | -- | -- |
| 225.81 | 0.7 | 2.81 | -- | 0.221 | 0.431 | -- | -- | -0.00407 | 9.5 | 24.1 | 22 | -- | -- |
| 228 | 0.706 | 2.83 | 0.313 | -- | -- | -- | -- | -0.0419 | -- | -- | -- | -- | -- |
| 228.71 | 0.707 | 2.83 | -- | 0.184 | -- | -- | -- | -0.0784 | 8.41 | -- | -- | -- | -- |
| 228.48 | 0.704 | 2.82 | -- | -- | 0.349 | -- | -- | -0.0283 | -- | 24.2 | 27 | -- | -- |
| 230.59 | 0.709 | 2.83 | -- | -- | -- | -- | -- | -0.0767 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 204.75 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 5 | 14 |
| 11 | 205.42 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 5 | 3 |
| 27 | 207.32 | temperature | 20.0 | 90 | < th | dose independent | rect. | 3 | 17 |
| 29 | 207.60 | wind | 1.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 31 | 207.80 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 38 | 208.04 | temperature | 20.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 43 | 208.21 | temperature | 20.0 | 90 | < th | dose independent | rect. | 3 | 4 |
| 49 | 208.32 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 2 | 4 |
| 51 | 208.42 | humidity | 80.0 | 90 | < th | dose independent | rect. | 4 | 3 |
| 64 | 208.85 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 4 | 3 |
| 103 | 209.63 | humidity | 80.0 | 10 | < th | dose independent | rect. | 5 | 1 |
| 108 | 209.63 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 119 | 209.69 | temperature | 20.0 | 10 | < th | dose independent | rect. | 4 | 2 |
| 164 | 210.41 | wind | 1.0 | 90 | > th | dose independent | rect. | 4 | 2 |
| 173 | 210.44 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 5 | 9 |
| 181 | 210.56 | temperature | 20.0 | 90 | < th | dose independent | rect. | 3 | 7 |
| 187 | 210.68 | temperature | 20.0 | 90 | > th | dose independent | sin | 1 | NA |
| 216 | 210.87 | temperature | 25.0 | 10 | < th | dose dependent | sin | 1 | NA |
| 232 | 211.01 | temperature | 20.0 | 90 | < th | dose independent | sin | 1 | NA |
| 259 | 211.29 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 15 | 17 |
| 333 | 212.00 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 17 | 15 |
| 339 | 212.03 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 13 | 17 |
| 422 | 212.73 | wind | 7.0 | 30 | > th | dose independent | rect. | 17 | 1 |
| 430 | 212.84 | wind | 7.0 | 30 | > th | dose independent | rect. | 17 | 3 |
| 435 | 212.88 | wind | 5.0 | 720 | < th | dose independent | rect. | 22 | 15 |
| 442 | 212.97 | temperature | 20.0 | 10 | < th | dose independent | rect. | 4 | 7 |
| 448 | 213.04 | radiation | 20.0 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 476 | 213.14 | radiation | 20.0 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 490 | 213.16 | wind | 5.0 | 720 | < th | dose independent | rect. | 22 | 13 |
| 516 | 213.28 | wind | 5.0 | 720 | < th | dose independent | rect. | 23 | 11 |
| 541 | 213.39 | wind | 5.0 | 720 | > th | dose independent | rect. | 19 | 19 |
| 600 | 213.62 | wind | 5.0 | 720 | > th | dose dependent | rect. | 19 | 15 |
| 699 | 214.02 | wind | 5.0 | 720 | > th | dose independent | rect. | 22 | 16 |
| 710 | 214.07 | temperature | 20.0 | 90 | > th | dose independent | rect. | 1 | 14 |
| 724 | 214.11 | humidity | 90.0 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 783 | 214.37 | wind | 5.0 | 720 | < th | dose independent | sin | 7 | NA |
| 822 | 214.52 | wind | 5.0 | 720 | > th | dose independent | sin | 7 | NA |
| 836 | 214.57 | wind | 5.0 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 861 | 214.68 | wind | 5.0 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 863 | 214.69 | wind | 5.0 | 30 | > th | dose dependent | rect. | 17 | 4 |
| 905 | 214.79 | wind | 7.0 | 90 | < th | dose independent | rect. | 6 | 23 |
| 910 | 214.81 | wind | 5.0 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 913 | 214.82 | wind | 5.0 | 720 | < th | dose independent | rect. | 1 | 9 |
| 925 | 214.86 | wind | 5.0 | 720 | > th | dose dependent | sin | 9 | NA |
| 927 | 214.86 | wind | 5.0 | 720 | > th | dose dependent | rect. | 19 | 19 |
| 941 | 214.91 | temperature | 25.0 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 946 | 214.94 | temperature | 20.0 | 90 | > th | dose independent | rect. | 1 | 10 |
| 948 | 214.94 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 6 |
| 949 | 214.95 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 5 | 1 |
| 951 | 214.96 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 5 | 1 |
| 966 | 215.00 | wind | 5.0 | 1440 | < th | dose independent | rect. | 7 | 3 |
| 976 | 215.01 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 7 |
| 992 | 215.03 | radiation | 1.0 | 90 | < th | dose independent | rect. | 5 | 1 |