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Os03g0720300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Glutamate decarboxylase isozyme 1 (EC 4.1.1.15).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.4 (0.0203) R2 : 0.219
β1 : 0.83 (0.0744) R2dD : 0.221 R2D : 0.182
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.176 (0.0434) R2dN8 : 0.0376 R2N8 : -0.00139
σ : 0.382
deviance : 66.66
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
48.1 0.326 13.4 0.984 0.377 0.685 0.232 0.829 0.183 12 5.4 203 -- --
48.49 0.324 13.4 0.989 0.366 0.505 0.345 -- 0.191 11.8 4.9 190 -- --
48.28 0.324 13.4 0.995 0.375 0.678 -- 0.857 0.183 12 5.4 192 -- --
48.82 0.325 13.4 0.963 0.367 0.458 -- -- 0.188 11.8 4.734 192 -- --
56.46 0.35 13.4 0.991 -- 0.701 -- 0.629 0.182 -- 5.3 146 -- --
53.66 0.343 13.4 0.845 0.46 -- 0.094 -- 0.185 13.5 -- -- -- --
53.7 0.343 13.4 0.848 0.46 -- -- -- 0.186 13.5 -- -- -- --
55.43 0.347 13.4 0.979 -- 0.542 -- -- 0.186 -- 4.852 62 -- --
71.91 0.395 13.4 -- 0.395 0.267 -- -- 0.0829 12.3 4.8 213 -- --
66.66 0.382 13.4 0.83 -- -- -- -- 0.176 -- -- -- -- --
72.65 0.399 13.4 -- 0.445 -- -- -- 0.0912 13.5 -- -- -- --
79.28 0.415 13.4 -- -- 0.357 -- -- 0.0786 -- 4.74 60 -- --
84.82 0.43 13.4 -- -- -- -- -- 0.0837 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 44.50 wind 5.0 90 < th dose independent rect. 9 18
2 45.00 humidity 50.0 270 > th dose dependent rect. 21 10
3 45.07 atmosphere 995.0 270 > th dose independent rect. 11 20
4 45.09 wind 5.0 90 < th dose independent rect. 9 16
6 45.14 wind 9.0 270 < th dose dependent rect. 7 4
8 45.28 wind 7.0 270 < th dose independent rect. 7 4
10 45.35 wind 9.0 90 < th dose dependent rect. 9 4
11 45.37 radiation 1.0 270 > th dose independent rect. 7 4
13 45.42 humidity 90.0 270 < th dose independent rect. 17 18
15 45.45 humidity 50.0 270 > th dose independent rect. 7 4
17 45.47 precipitation 0.1 270 < th dose independent rect. 7 4
18 45.47 precipitation 0.1 270 < th dose dependent rect. 7 4
21 45.50 temperature 10.0 270 > th dose independent rect. 7 4
22 45.50 atmosphere 995.0 270 > th dose independent rect. 7 4
23 45.50 atmosphere 1015.0 270 < th dose independent rect. 7 4
24 45.50 temperature 10.0 270 > th dose independent rect. 11 20
26 45.54 wind 5.0 270 < th dose independent rect. 17 19
27 45.57 wind 7.0 270 < th dose independent rect. 7 14
28 45.57 wind 5.0 270 < th dose independent rect. 7 19
29 45.57 wind 5.0 270 < th dose independent rect. 6 21
34 45.64 wind 5.0 90 < th dose independent rect. 9 4
40 45.72 radiation 40.0 30 < th dose independent rect. 12 21
41 45.74 atmosphere 995.0 30 > th dose independent rect. 12 21
44 45.78 wind 9.0 270 < th dose dependent rect. 7 14
46 45.81 humidity 60.0 30 > th dose independent rect. 12 21
59 45.92 wind 5.0 270 < th dose independent rect. 7 16
65 45.98 wind 1.0 270 > th dose independent rect. 7 4
67 45.99 wind 9.0 90 < th dose independent rect. 9 3
72 46.02 wind 7.0 10 < th dose independent rect. 9 3
73 46.02 temperature 10.0 1440 > th dose independent rect. 10 3
76 46.02 atmosphere 995.0 1440 > th dose independent rect. 10 3
77 46.02 radiation 1.0 30 > th dose independent rect. 9 3
78 46.02 temperature 10.0 1440 > th dose independent rect. 13 21
85 46.04 temperature 10.0 30 > th dose independent rect. 9 3
87 46.04 atmosphere 995.0 30 > th dose independent rect. 9 3
88 46.04 atmosphere 1015.0 30 < th dose independent rect. 9 3
89 46.04 precipitation 0.1 30 < th dose independent rect. 9 3
91 46.04 temperature 10.0 30 > th dose independent rect. 12 21
92 46.04 precipitation 0.1 30 < th dose dependent rect. 9 3
102 46.08 humidity 50.0 90 > th dose independent rect. 9 3
104 46.08 wind 9.0 270 < th dose dependent rect. 9 1
133 46.16 wind 7.0 270 < th dose independent rect. 9 1
142 46.18 temperature 10.0 30 > th dose dependent rect. 9 3
143 46.19 wind 1.0 30 > th dose independent rect. 9 3
145 46.19 atmosphere 1015.0 270 < th dose independent rect. 11 20
146 46.19 atmosphere 1015.0 30 < th dose independent rect. 12 21
147 46.20 humidity 50.0 270 > th dose independent rect. 11 20
149 46.21 humidity 50.0 270 > th dose independent rect. 9 1
151 46.21 humidity 90.0 270 < th dose independent rect. 7 4
154 46.23 precipitation 0.1 270 < th dose independent rect. 9 1
155 46.23 precipitation 0.1 270 < th dose dependent rect. 9 1
156 46.24 temperature 10.0 270 > th dose independent rect. 9 1
157 46.24 atmosphere 995.0 270 > th dose independent rect. 9 1
158 46.24 atmosphere 1015.0 270 < th dose independent rect. 9 1
160 46.24 atmosphere 995.0 10 > th dose independent rect. 14 19
162 46.24 temperature 10.0 270 > th dose independent rect. 10 23
163 46.24 wind 1.0 90 > th dose dependent rect. 12 7
169 46.27 wind 7.0 270 < th dose independent rect. 16 10
171 46.27 precipitation 0.1 270 < th dose independent rect. 11 20
173 46.27 precipitation 0.1 270 < th dose dependent rect. 11 20
176 46.28 precipitation 0.1 30 < th dose independent rect. 12 21
179 46.28 precipitation 0.1 30 < th dose dependent rect. 12 21
181 46.29 wind 9.0 270 < th dose dependent rect. 7 16
202 46.33 precipitation 0.1 270 < th dose independent rect. 7 14
205 46.33 precipitation 0.1 270 < th dose dependent rect. 7 14
209 46.35 humidity 90.0 30 < th dose independent rect. 9 3
220 46.40 radiation 1.0 270 > th dose independent rect. 9 1
230 46.41 wind 9.0 90 < th dose dependent rect. 9 18
250 46.47 wind 9.0 10 < th dose independent rect. 9 5
251 46.47 radiation 1.0 10 > th dose independent rect. 9 5
252 46.47 wind 9.0 270 < th dose independent rect. 11 20
254 46.48 wind 1.0 270 > th dose independent rect. 9 1
271 46.49 humidity 90.0 270 < th dose independent rect. 24 11
279 46.51 wind 9.0 30 < th dose independent rect. 12 21
290 46.52 wind 9.0 90 < th dose dependent rect. 9 16
291 46.52 wind 3.0 90 > th dose dependent rect. 12 21
307 46.55 wind 5.0 90 > th dose independent rect. 12 21
329 46.58 wind 9.0 270 < th dose dependent rect. 7 18
341 46.62 wind 1.0 10 > th dose independent rect. 9 5
347 46.64 temperature 10.0 10 > th dose independent rect. 9 5
349 46.64 atmosphere 995.0 10 > th dose independent rect. 9 5
350 46.64 atmosphere 1015.0 10 < th dose independent rect. 9 5
351 46.64 precipitation 0.1 10 < th dose independent rect. 9 5
354 46.64 temperature 10.0 10 > th dose independent rect. 14 19
356 46.64 precipitation 0.1 10 < th dose dependent rect. 9 5
420 46.79 humidity 50.0 90 > th dose dependent rect. 12 21
424 46.81 temperature 10.0 1440 > th dose independent rect. 10 5
430 46.81 temperature 10.0 1440 > th dose independent rect. 15 19
433 46.81 temperature 30.0 30 < th dose independent rect. 12 21
442 46.84 atmosphere 995.0 90 > th dose dependent rect. 12 7
448 46.86 humidity 90.0 270 < th dose independent rect. 9 1
450 46.86 atmosphere 1015.0 10 < th dose independent rect. 14 19
453 46.87 temperature 30.0 270 < th dose independent rect. 7 4
466 46.90 precipitation 0.1 270 < th dose independent rect. 16 10
469 46.90 precipitation 0.1 270 < th dose dependent rect. 16 10
472 46.91 temperature 20.0 270 > th dose independent rect. 1 6
483 46.92 precipitation 0.1 10 < th dose independent rect. 14 19
484 46.92 precipitation 0.1 10 < th dose dependent rect. 14 19
486 46.93 radiation 1.0 270 > th dose independent rect. 17 19
516 46.97 temperature 10.0 270 > th dose dependent rect. 7 4
543 47.01 temperature 10.0 10 > th dose dependent rect. 9 5
546 47.02 humidity 90.0 10 < th dose independent rect. 9 5
548 47.02 wind 9.0 90 < th dose dependent rect. 9 14
559 47.04 radiation 1.0 270 > th dose independent rect. 4 8
579 47.06 radiation 20.0 270 < th dose independent rect. 21 10
602 47.09 wind 5.0 270 > th dose independent rect. 22 20
604 47.09 radiation 1.0 90 > th dose independent rect. 12 21
609 47.10 precipitation 0.1 270 < th dose independent rect. 17 19
614 47.10 precipitation 0.1 270 < th dose dependent rect. 17 19
615 47.11 humidity 90.0 270 < th dose independent sin 8 NA
622 47.11 precipitation 0.1 270 < th dose independent rect. 18 17
629 47.11 precipitation 0.1 270 < th dose dependent rect. 18 17
644 47.13 humidity 70.0 270 > th dose independent rect. 21 10
646 47.13 wind 1.0 90 > th dose independent rect. 19 17
647 47.13 wind 9.0 30 < th dose independent rect. 14 19
663 47.15 atmosphere 995.0 270 > th dose independent rect. 2 14
666 47.16 temperature 20.0 270 > th dose independent rect. 3 3
669 47.16 atmosphere 995.0 270 > th dose independent rect. 11 7
709 47.23 temperature 10.0 270 > th dose independent rect. 21 10
710 47.23 temperature 30.0 270 < th dose independent rect. 21 10
711 47.23 humidity 50.0 270 > th dose independent rect. 21 10
713 47.23 atmosphere 995.0 270 > th dose independent rect. 21 10
715 47.23 temperature 10.0 270 > th dose independent rect. 7 14
720 47.23 temperature 10.0 270 > th dose dependent rect. 9 1
721 47.23 wind 9.0 270 < th dose dependent rect. 17 19
723 47.24 wind 3.0 90 > th dose independent rect. 12 7
736 47.25 radiation 1.0 90 > th dose independent rect. 12 19
740 47.25 wind 9.0 270 < th dose dependent rect. 6 21
781 47.30 radiation 20.0 10 < th dose independent rect. 13 20
783 47.30 wind 9.0 10 < th dose dependent rect. 9 18
795 47.32 atmosphere 995.0 270 > th dose independent rect. 12 5
800 47.33 wind 9.0 270 < th dose independent rect. 21 10
824 47.35 wind 1.0 90 > th dose dependent rect. 12 11
829 47.36 wind 3.0 270 > th dose dependent rect. 24 18
845 47.38 wind 9.0 90 < th dose dependent rect. 9 12
849 47.38 wind 3.0 270 > th dose dependent rect. 22 20
856 47.39 temperature 15.0 270 > th dose independent rect. 18 17
875 47.41 humidity 80.0 270 > th dose independent rect. 23 8
905 47.44 humidity 60.0 90 > th dose independent rect. 12 7
922 47.45 wind 1.0 270 > th dose independent rect. 17 9
982 47.49 radiation 40.0 270 < th dose dependent rect. 21 10
1000 47.51 humidity 50.0 270 > th dose independent rect. 18 17