Os03g0712300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to CROC-1-like protein (Fragment).
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Os03g0712300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to CROC-1-like protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 69.76 | 0.392 | 8.84 | -0.757 | 0.459 | -0.714 | 0.81 | 0.814 | -0.334 | 7.27 | 0.19 | 108 | -- | -- |
| 71.87 | 0.395 | 8.83 | -0.712 | 0.462 | -0.871 | 1.29 | -- | -0.302 | 5.19 | 0.1831 | 102 | -- | -- |
| 71.11 | 0.393 | 8.84 | -0.735 | 0.487 | -0.706 | -- | 0.647 | -0.336 | 7.26 | 0.24 | 117 | -- | -- |
| 73.51 | 0.399 | 8.84 | -0.722 | 0.494 | -0.705 | -- | -- | -0.329 | 7.24 | 0.2301 | 118 | -- | -- |
| 81.34 | 0.42 | 8.87 | -0.724 | -- | -0.769 | -- | 0.656 | -0.343 | -- | 0.25 | 87 | -- | -- |
| 79.19 | 0.417 | 8.82 | -0.642 | 1 | -- | -0.46 | -- | -0.27 | 10.9 | -- | -- | -- | -- |
| 80.07 | 0.419 | 8.82 | -0.661 | 1.01 | -- | -- | -- | -0.272 | 10.8 | -- | -- | -- | -- |
| 82.67 | 0.423 | 8.85 | -0.741 | -- | -0.746 | -- | -- | -0.325 | -- | 0.192 | 54 | -- | -- |
| 87.36 | 0.435 | 8.84 | -- | 0.497 | -0.727 | -- | -- | -0.282 | 7.05 | 0.38 | 118 | -- | -- |
| 142.86 | 0.558 | 8.84 | -0.682 | -- | -- | -- | -- | -0.279 | -- | -- | -- | -- | -- |
| 91.6 | 0.448 | 8.8 | -- | 1.01 | -- | -- | -- | -0.199 | 10.9 | -- | -- | -- | -- |
| 96.38 | 0.457 | 8.83 | -- | -- | -0.755 | -- | -- | -0.224 | -- | 0.46 | 64 | -- | -- |
| 155.14 | 0.581 | 8.82 | -- | -- | -- | -- | -- | -0.203 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 66.53 | temperature | 30.0 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 15 | 66.86 | radiation | 1.0 | 90 | < th | dose dependent | sin | 12 | NA |
| 16 | 66.87 | temperature | 30.0 | 720 | < th | dose independent | rect. | 18 | 1 |
| 17 | 66.92 | humidity | 50.0 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 18 | 66.97 | humidity | 50.0 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 19 | 67.15 | temperature | 30.0 | 720 | < th | dose independent | rect. | 18 | 9 |
| 20 | 67.31 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 21 | 67.37 | radiation | 1.0 | 90 | < th | dose independent | sin | 12 | NA |
| 23 | 67.56 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 14 |
| 24 | 67.60 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 26 | 67.74 | humidity | 60.0 | 270 | > th | dose independent | rect. | 17 | 10 |
| 30 | 67.88 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 14 |
| 31 | 67.88 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 14 |
| 32 | 67.93 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 22 |
| 33 | 68.19 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 36 | 68.24 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 17 | 10 |
| 38 | 68.25 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 19 | 15 |
| 52 | 68.40 | radiation | 1.0 | 90 | < th | dose independent | rect. | 19 | 23 |
| 55 | 68.48 | temperature | 10.0 | 270 | > th | dose independent | rect. | 17 | 10 |
| 56 | 68.48 | radiation | 20.0 | 270 | < th | dose independent | rect. | 17 | 10 |
| 59 | 68.48 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 14 |
| 60 | 68.48 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 14 |
| 63 | 68.53 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 71 | 68.60 | wind | 9.0 | 270 | < th | dose independent | rect. | 17 | 10 |
| 73 | 68.61 | temperature | 30.0 | 720 | > th | dose independent | rect. | 18 | 1 |
| 101 | 68.63 | humidity | 70.0 | 720 | < th | dose dependent | rect. | 18 | 14 |
| 104 | 68.67 | humidity | 60.0 | 720 | < th | dose independent | rect. | 18 | 2 |
| 118 | 68.68 | humidity | 60.0 | 720 | < th | dose dependent | rect. | 18 | 2 |
| 132 | 68.69 | radiation | 1.0 | 90 | < th | dose independent | rect. | 19 | 12 |
| 150 | 68.77 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 13 | 18 |
| 152 | 68.78 | radiation | 1.0 | 90 | < th | dose independent | rect. | 19 | 15 |
| 162 | 68.84 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 14 |
| 166 | 68.90 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 174 | 68.99 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 20 | 12 |
| 192 | 69.09 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 17 | 10 |
| 193 | 69.09 | radiation | 1.0 | 10 | < th | dose independent | rect. | 20 | 11 |
| 196 | 69.09 | radiation | 1.0 | 270 | < th | dose independent | rect. | 5 | 22 |
| 198 | 69.09 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 17 | 10 |
| 204 | 69.12 | wind | 1.0 | 90 | > th | dose independent | rect. | 19 | 10 |
| 213 | 69.19 | radiation | 1.0 | 10 | < th | dose independent | sin | 11 | NA |
| 218 | 69.20 | radiation | 1.0 | 270 | < th | dose independent | rect. | 10 | 17 |
| 228 | 69.26 | wind | 7.0 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 229 | 69.27 | radiation | 1.0 | 90 | > th | dose independent | sin | 12 | NA |
| 232 | 69.28 | wind | 1.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 236 | 69.30 | wind | 1.0 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 247 | 69.38 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 5 | 4 |
| 250 | 69.39 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 5 |
| 257 | 69.43 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 6 |
| 278 | 69.49 | wind | 5.0 | 10 | < th | dose dependent | rect. | 3 | 7 |
| 289 | 69.53 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 18 |
| 290 | 69.53 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 18 |
| 305 | 69.59 | wind | 5.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 306 | 69.59 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 6 |
| 323 | 69.64 | temperature | 25.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 326 | 69.65 | radiation | 1.0 | 90 | > th | dose independent | rect. | 15 | 16 |
| 329 | 69.67 | humidity | 70.0 | 10 | > th | dose independent | rect. | 19 | 10 |
| 353 | 69.73 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 17 | 10 |
| 358 | 69.76 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 5 |
| 366 | 69.76 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 406 | 69.87 | temperature | 15.0 | 90 | > th | dose independent | rect. | 9 | 18 |
| 426 | 69.91 | radiation | 10.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 432 | 69.92 | temperature | 15.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 441 | 69.93 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 454 | 69.96 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 6 |
| 467 | 69.99 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 474 | 70.00 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 6 |
| 475 | 70.00 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 6 |
| 476 | 70.00 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 6 |
| 477 | 70.00 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 6 |
| 479 | 70.00 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 18 |
| 480 | 70.00 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 6 |
| 488 | 70.02 | temperature | 10.0 | 90 | > th | dose independent | rect. | 3 | 6 |
| 490 | 70.02 | humidity | 50.0 | 90 | > th | dose independent | rect. | 3 | 6 |
| 491 | 70.02 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 3 | 6 |
| 492 | 70.02 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 3 | 6 |
| 523 | 70.07 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 2 | 5 |
| 528 | 70.08 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 18 |
| 532 | 70.09 | wind | 9.0 | 90 | < th | dose independent | rect. | 9 | 18 |
| 533 | 70.09 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 19 |
| 560 | 70.13 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 2 | 5 |
| 561 | 70.14 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 6 |
| 567 | 70.15 | radiation | 20.0 | 270 | < th | dose independent | rect. | 1 | 7 |
| 577 | 70.19 | wind | 9.0 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 587 | 70.21 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 629 | 70.29 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 6 |
| 644 | 70.31 | radiation | 30.0 | 90 | < th | dose independent | rect. | 15 | 18 |
| 663 | 70.35 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 5 | 15 |
| 704 | 70.41 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 3 | 6 |
| 715 | 70.44 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 5 | 14 |
| 729 | 70.46 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 16 | 21 |
| 730 | 70.47 | radiation | 1.0 | 10 | > th | dose independent | sin | 11 | NA |
| 751 | 70.48 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 16 | 19 |
| 754 | 70.49 | radiation | 1.0 | 270 | > th | dose independent | rect. | 11 | 20 |
| 785 | 70.56 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 13 | 18 |
| 793 | 70.57 | temperature | 20.0 | 90 | > th | dose independent | rect. | 4 | 1 |
| 794 | 70.57 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 15 | 18 |
| 838 | 70.62 | humidity | 60.0 | 720 | > th | dose independent | rect. | 17 | 17 |
| 865 | 70.65 | radiation | 1.0 | 270 | > th | dose independent | rect. | 10 | 22 |
| 872 | 70.66 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 9 | 18 |
| 873 | 70.66 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 877 | 70.66 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 9 | 18 |
| 879 | 70.67 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 19 |
| 885 | 70.67 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 19 |
| 932 | 70.75 | wind | 1.0 | 90 | > th | dose independent | rect. | 9 | 6 |
| 965 | 70.78 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 15 | 18 |
| 986 | 70.81 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 4 | 1 |
| 995 | 70.83 | wind | 1.0 | 270 | > th | dose independent | rect. | 8 | 17 |