Os03g0708000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Phospholipase A2 family protein.
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Os03g0708000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Phospholipase A2 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 277.66 | 0.783 | 6.25 | -3.68 | 1.15 | -2.79 | -1.07 | -7.41 | -1.23 | 23.4 | 7.134 | 3718 | -- | -- |
| 298.96 | 0.805 | 6.02 | -2.33 | 1.1 | -2.16 | -1.5 | -- | -0.919 | 23.2 | 22.77 | 3349 | -- | -- |
| 282.03 | 0.782 | 6.26 | -3.71 | 1.16 | -2.8 | -- | -7.64 | -1.24 | 23.7 | 7.975 | 3805 | -- | -- |
| 307.45 | 0.817 | 6.04 | -2.27 | 1.22 | -2.19 | -- | -- | -0.964 | 23.7 | 23 | 3812 | -- | -- |
| 350.66 | 0.872 | 6.24 | -3.56 | -- | -2.75 | -- | -7.36 | -1.24 | -- | 6.93 | 4610 | -- | -- |
| 437.23 | 0.98 | 6.1 | -3.12 | 0.923 | -- | -1.63 | -- | -1.27 | 23 | -- | -- | -- | -- |
| 447.82 | 0.991 | 6.09 | -3.06 | 0.933 | -- | -- | -- | -1.27 | 23.5 | -- | -- | -- | -- |
| 367.34 | 0.897 | 5.98 | -2.57 | -- | -2.41 | -- | -- | -0.87 | -- | 20.09 | 1681 | -- | -- |
| 397.91 | 0.929 | 5.9 | -- | 1.17 | -3.06 | -- | -- | -0.441 | 23.2 | 17.9 | 5177 | -- | -- |
| 502.5 | 1.05 | 6.07 | -3.03 | -- | -- | -- | -- | -1.26 | -- | -- | -- | -- | -- |
| 694.4 | 1.23 | 6.02 | -- | 0.901 | -- | -- | -- | -0.927 | 23.3 | -- | -- | -- | -- |
| 389.16 | 0.919 | 5.77 | -- | -- | -2.82 | -- | -- | 0.075 | -- | 18.9 | 47520 | -- | -- |
| 745.26 | 1.27 | 6 | -- | -- | -- | -- | -- | -0.921 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 267.25 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 21 | 3 |
| 2 | 267.29 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 21 | 3 |
| 4 | 267.71 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 8 | 267.77 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 22 | 5 |
| 27 | 268.26 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 2 | 1 |
| 32 | 268.37 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 19 | 8 |
| 35 | 268.39 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 19 | 8 |
| 164 | 271.04 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 19 | 14 |
| 168 | 271.08 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 19 | 14 |
| 179 | 271.22 | temperature | 10.0 | 4320 | > th | dose dependent | sin | 12 | NA |
| 185 | 271.28 | temperature | 30.0 | 4320 | < th | dose dependent | sin | 12 | NA |
| 480 | 274.44 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 6 |
| 485 | 274.56 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 512 | 274.92 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 6 |
| 513 | 274.92 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 6 |
| 609 | 275.95 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 15 | 15 |