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Os03g0705800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.5 (0.0281) R2 : 0.716
β1 : -0.948 (0.118) R2dD : 0.0576 R2D : -0.0173
β2 : 2.18 (0.0681) R2dC : 0.633 R2C : 0.617
β3 : 1.01 (0.0994) R2dE : 0.0905 R2E : -0.0194
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.385 (0.0606) R2dN8 : 0.0345 R2N8 : 0.0233
σ : 0.523
deviance : 126.15
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_____
C
peak time of C : 2.19
E
wheather : precipitation
threshold : 1.4
memory length : 27060
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
125.81 0.527 11.4 -0.53 2.15 0.389 0.689 2.64 0.369 2.2 0.6433 11313 -- --
123.8 0.518 11.5 -0.948 2.17 1.02 0.781 -- 0.391 2.2 1.387 27060 -- --
127.4 0.526 11.4 -0.554 2.15 0.363 -- 2.64 0.361 2.2 0.783 11243 -- --
126.15 0.523 11.5 -0.948 2.18 1.01 -- -- 0.385 2.19 1.4 27060 -- --
401.59 0.933 11.4 -0.454 -- 0.389 -- 2.9 0.422 -- 0.7524 11078 -- --
152.71 0.579 11.5 -0.343 2.15 -- 0.787 -- 0.282 2.2 -- -- -- --
155.03 0.583 11.5 -0.365 2.16 -- -- -- 0.278 2.19 -- -- -- --
403.65 0.936 11.5 -0.627 -- 1.11 -- -- 0.425 -- 0.9266 13834 -- --
142.86 0.557 11.5 -- 2.15 0.718 -- -- 0.426 2.19 1.228 18297 -- --
432.21 0.971 11.5 -0.275 -- -- -- -- 0.33 -- -- -- -- --
158.54 0.589 11.5 -- 2.15 -- -- -- 0.318 2.18 -- -- -- --
415.28 0.949 11.4 -- -- 0.979 -- -- 0.47 -- 0.8943 13812 -- --
434.2 0.973 11.5 -- -- -- -- -- 0.36 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 124.62 precipitation 0.1 43200 > th dose dependent rect. 17 1
2 124.70 precipitation 0.1 43200 > th dose independent rect. 17 1
3 124.92 precipitation 0.1 43200 < th dose independent rect. 17 1
4 124.92 precipitation 0.1 43200 < th dose dependent rect. 17 1
5 125.18 radiation 1.0 43200 < th dose dependent rect. 20 7
6 125.27 precipitation 0.1 14400 > th dose dependent rect. 20 22
7 125.34 radiation 1.0 43200 < th dose dependent rect. 22 5
9 125.75 wind 9.0 43200 > th dose dependent rect. 18 13
11 125.96 wind 9.0 43200 > th dose dependent rect. 18 10
13 126.09 wind 9.0 43200 > th dose dependent rect. 18 7
17 126.28 precipitation 0.1 14400 > th dose dependent rect. 17 10
20 126.41 wind 7.0 43200 > th dose dependent rect. 18 3
21 126.41 precipitation 0.1 14400 > th dose dependent rect. 17 7
22 126.51 precipitation 0.1 14400 > th dose dependent rect. 6 12
23 126.53 wind 9.0 43200 > th dose independent rect. 18 3
25 126.65 atmosphere 995.0 43200 > th dose independent rect. 11 2
30 126.79 wind 9.0 43200 < th dose independent rect. 18 3
47 127.16 precipitation 0.1 14400 > th dose dependent rect. 6 18
52 127.24 precipitation 0.1 14400 > th dose dependent rect. 12 6
54 127.25 wind 1.0 14400 > th dose independent rect. 24 5
55 127.25 radiation 1.0 43200 < th dose dependent rect. 24 3
59 127.30 wind 5.0 14400 > th dose independent rect. 20 1
67 127.39 precipitation 0.1 14400 > th dose dependent rect. 6 21
101 127.69 wind 1.0 14400 < th dose independent rect. 24 5
103 127.70 wind 1.0 4320 < th dose independent rect. 4 1
116 127.77 precipitation 0.1 14400 > th dose dependent rect. 2 16
122 127.81 wind 5.0 14400 < th dose independent rect. 20 1
124 127.81 precipitation 0.1 14400 > th dose dependent rect. 12 15
131 127.86 precipitation 0.1 14400 > th dose dependent sin 17 NA
149 127.98 precipitation 0.1 14400 > th dose dependent rect. 17 20
155 128.05 atmosphere 995.0 43200 < th dose dependent rect. 11 5
159 128.06 atmosphere 995.0 43200 < th dose dependent rect. 14 1
168 128.09 atmosphere 995.0 43200 < th dose independent rect. 7 8
173 128.13 wind 9.0 43200 > th dose independent rect. 18 7
205 128.39 wind 9.0 43200 > th dose independent rect. 18 10
213 128.48 wind 1.0 4320 > th dose independent rect. 4 1
214 128.48 wind 1.0 14400 < th dose dependent rect. 1 4
234 128.67 precipitation 0.1 14400 > th dose dependent rect. 2 21
285 129.00 precipitation 0.1 14400 > th dose independent rect. 17 7
291 129.03 precipitation 0.1 14400 < th dose independent rect. 17 7
293 129.03 precipitation 0.1 14400 < th dose dependent rect. 17 7
307 129.08 precipitation 0.1 14400 > th dose independent rect. 17 5
308 129.12 precipitation 0.1 14400 < th dose independent rect. 17 5
309 129.12 precipitation 0.1 14400 < th dose dependent rect. 17 5
317 129.17 wind 9.0 43200 > th dose independent rect. 18 14
323 129.20 wind 9.0 43200 < th dose independent rect. 18 7
326 129.23 precipitation 0.1 14400 < th dose independent rect. 8 10
328 129.23 precipitation 0.1 14400 < th dose dependent rect. 8 10
329 129.24 precipitation 0.1 14400 > th dose independent rect. 6 18
330 129.24 precipitation 0.1 14400 < th dose independent rect. 6 18
332 129.24 precipitation 0.1 14400 < th dose dependent rect. 6 18
334 129.25 precipitation 0.1 14400 > th dose independent rect. 8 10
363 129.36 precipitation 0.1 14400 > th dose dependent no NA NA
364 129.37 humidity 80.0 14400 > th dose independent rect. 17 1
377 129.38 precipitation 0.1 14400 > th dose dependent rect. 11 23
379 129.39 wind 9.0 43200 < th dose independent rect. 18 9
428 129.63 wind 9.0 43200 > th dose dependent sin 12 NA
456 129.72 humidity 90.0 43200 < th dose independent rect. 14 1
465 129.78 precipitation 0.1 43200 > th dose dependent rect. 19 2
488 129.87 wind 7.0 43200 > th dose independent rect. 6 1
537 130.09 humidity 80.0 4320 < th dose independent rect. 18 1
561 130.21 atmosphere 995.0 43200 > th dose independent rect. 7 8
637 130.48 precipitation 0.1 14400 < th dose independent sin 19 NA
638 130.48 precipitation 0.1 14400 < th dose dependent sin 19 NA
644 130.50 precipitation 0.1 14400 > th dose independent sin 19 NA
700 130.66 wind 9.0 43200 < th dose independent rect. 18 15
739 130.77 wind 9.0 14400 > th dose dependent rect. 17 18
758 130.85 precipitation 0.1 14400 < th dose independent rect. 20 22
760 130.85 precipitation 0.1 14400 < th dose dependent rect. 20 22
773 130.88 precipitation 0.1 14400 > th dose independent rect. 20 22
774 130.89 wind 1.0 43200 > th dose independent rect. 8 1
784 130.92 wind 1.0 14400 > th dose independent rect. 1 2
849 131.10 wind 1.0 14400 < th dose dependent rect. 2 1
865 131.17 humidity 90.0 14400 > th dose independent rect. 21 1
868 131.18 humidity 90.0 43200 > th dose independent rect. 14 1
869 131.18 wind 5.0 14400 < th dose independent rect. 7 2
941 131.47 wind 1.0 14400 > th dose independent rect. 2 8
942 131.47 wind 1.0 14400 < th dose dependent rect. 4 2