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Os03g0701900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.7 (0.0201) R2 : 0.144
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.371 (0.0423) R2dN8 : 0.186 R2N8 : 0.144
σ : 0.378
deviance : 65.68
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
43.49 0.31 11.9 -1.06 0.335 -0.516 0.163 1.31 0.0413 19.9 21.33 4466 -- --
44.54 0.311 11.8 -0.881 0.353 -0.795 0.205 -- 0.0857 19.9 19.39 5703 -- --
43.56 0.307 11.9 -1.06 0.336 -0.517 -- 1.31 0.0413 19.9 21.32 4450 -- --
44.11 0.309 11.8 -0.933 0.338 -0.88 -- -- 0.125 19.8 18.9 5661 -- --
49.56 0.328 11.9 -1.09 -- -0.512 -- 1.38 0.0287 -- 21.4 5096 -- --
56.28 0.352 11.8 -0.341 0.331 -- 0.221 -- 0.336 20.1 -- -- -- --
56.43 0.352 11.8 -0.347 0.331 -- -- -- 0.336 20 -- -- -- --
49.84 0.329 11.8 -0.976 -- -0.989 -- -- 0.0969 -- 18.8 6557 -- --
53.51 0.341 11.8 -- 0.334 -0.419 -- -- 0.282 19.6 21.5 1226 -- --
62.43 0.369 11.7 -0.351 -- -- -- -- 0.332 -- -- -- -- --
59.61 0.361 11.7 -- 0.334 -- -- -- 0.375 19.9 -- -- -- --
57.57 0.353 11.8 -- -- -0.419 -- -- 0.255 -- 21.99 791 -- --
65.68 0.378 11.7 -- -- -- -- -- 0.371 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 41.29 temperature 15.0 270 > th dose dependent rect. 17 20
3 42.02 temperature 15.0 270 > th dose dependent rect. 18 18
8 42.21 humidity 70.0 43200 < th dose dependent sin 8 NA
13 42.38 humidity 70.0 43200 < th dose independent rect. 22 12
15 42.40 humidity 70.0 43200 < th dose independent rect. 18 15
16 42.40 humidity 70.0 43200 < th dose dependent rect. 22 14
23 42.45 humidity 70.0 43200 > th dose independent rect. 1 9
26 42.46 humidity 60.0 43200 < th dose dependent rect. 13 1
44 42.58 precipitation 0.1 43200 > th dose independent rect. 9 2
45 42.58 precipitation 0.1 43200 > th dose dependent rect. 9 2
57 42.64 precipitation 0.1 43200 < th dose independent rect. 8 3
58 42.64 precipitation 0.1 43200 < th dose dependent rect. 8 3
80 42.71 humidity 80.0 43200 < th dose dependent rect. 7 3
83 42.72 humidity 90.0 43200 > th dose dependent rect. 13 1
87 42.73 humidity 60.0 43200 > th dose independent sin 8 NA
127 42.82 humidity 60.0 43200 < th dose dependent rect. 13 21
140 42.87 wind 1.0 43200 > th dose independent rect. 24 1
144 42.88 humidity 60.0 43200 < th dose independent sin 7 NA
147 42.89 precipitation 0.1 43200 > th dose independent rect. 7 6
159 42.91 precipitation 0.1 43200 > th dose dependent rect. 7 6
164 42.93 temperature 20.0 14400 > th dose dependent rect. 14 1
172 42.96 precipitation 0.1 43200 < th dose independent rect. 7 6
174 42.96 precipitation 0.1 43200 < th dose dependent rect. 7 6
210 43.02 temperature 25.0 43200 > th dose independent rect. 12 1
213 43.02 atmosphere 995.0 43200 < th dose independent rect. 21 16
221 43.03 radiation 20.0 43200 < th dose independent rect. 10 1
237 43.05 atmosphere 995.0 43200 < th dose independent rect. 22 14
261 43.07 temperature 20.0 14400 > th dose dependent rect. 11 5
279 43.09 atmosphere 995.0 43200 > th dose independent rect. 22 14
302 43.11 atmosphere 995.0 43200 > th dose independent rect. 19 17
313 43.12 temperature 25.0 43200 < th dose independent rect. 12 1
326 43.13 temperature 20.0 14400 < th dose independent rect. 19 6
345 43.14 humidity 70.0 43200 < th dose dependent no NA NA
365 43.15 atmosphere 995.0 43200 < th dose dependent sin 9 NA
374 43.15 humidity 70.0 43200 < th dose dependent rect. 6 23
379 43.16 humidity 70.0 43200 < th dose independent rect. 18 5
383 43.16 temperature 20.0 14400 > th dose dependent rect. 11 1
412 43.18 atmosphere 995.0 43200 > th dose independent rect. 5 3
424 43.18 wind 1.0 43200 < th dose dependent rect. 10 17
461 43.20 temperature 20.0 4320 < th dose independent rect. 17 7
503 43.22 radiation 1.0 43200 > th dose independent rect. 14 1
504 43.22 humidity 70.0 43200 > th dose independent rect. 17 6
507 43.22 atmosphere 995.0 43200 > th dose independent rect. 1 10
510 43.22 temperature 15.0 14400 > th dose dependent rect. 9 1
532 43.23 humidity 60.0 43200 > th dose independent rect. 19 20
544 43.24 humidity 70.0 43200 > th dose independent rect. 18 2
547 43.24 humidity 70.0 43200 > th dose independent rect. 18 4
548 43.24 atmosphere 995.0 43200 > th dose independent rect. 4 5
551 43.24 atmosphere 995.0 43200 > th dose independent rect. 2 8
570 43.25 temperature 20.0 4320 < th dose independent rect. 20 1
572 43.25 radiation 1.0 43200 < th dose independent rect. 14 1
573 43.25 humidity 90.0 43200 > th dose independent rect. 12 2
576 43.25 temperature 30.0 14400 < th dose dependent rect. 9 1
578 43.25 radiation 1.0 43200 < th dose dependent rect. 14 1
592 43.26 wind 9.0 43200 > th dose independent rect. 21 2
595 43.26 temperature 20.0 14400 > th dose independent rect. 18 8
612 43.27 wind 1.0 43200 < th dose independent rect. 24 1
620 43.27 humidity 60.0 43200 > th dose independent rect. 14 20
625 43.27 humidity 60.0 43200 < th dose dependent rect. 12 13
626 43.27 atmosphere 995.0 43200 < th dose dependent rect. 21 13
634 43.28 humidity 60.0 43200 < th dose independent sin 11 NA
665 43.29 atmosphere 995.0 43200 < th dose independent rect. 2 8
673 43.29 atmosphere 995.0 43200 < th dose dependent rect. 1 8
674 43.29 humidity 60.0 43200 < th dose dependent rect. 12 10
688 43.30 humidity 70.0 43200 < th dose independent rect. 18 2
690 43.30 temperature 20.0 14400 > th dose independent rect. 19 6
691 43.30 atmosphere 995.0 43200 < th dose independent rect. 3 6
705 43.30 atmosphere 995.0 43200 < th dose dependent rect. 4 4
730 43.31 temperature 20.0 4320 > th dose independent rect. 16 9
757 43.32 temperature 20.0 4320 > th dose independent rect. 15 11
787 43.33 wind 1.0 43200 > th dose independent rect. 23 3
824 43.34 temperature 20.0 4320 < th dose independent sin 15 NA
836 43.34 temperature 20.0 14400 > th dose dependent sin 22 NA
845 43.34 atmosphere 995.0 43200 < th dose dependent rect. 23 10
921 43.36 temperature 25.0 4320 < th dose dependent rect. 20 1
996 43.38 temperature 20.0 4320 > th dose independent sin 15 NA
999 43.38 atmosphere 995.0 43200 < th dose independent rect. 5 3