Os03g0698900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Alkaline phytoceramidase family protein.
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Os03g0698900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Alkaline phytoceramidase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24.33 | 0.232 | 10.1 | -0.0243 | 0.797 | -0.615 | 0.0834 | -0.153 | 0.139 | 4.17 | 25.09 | 1980 | -- | -- |
| 24.36 | 0.23 | 10.1 | -0.0389 | 0.804 | -0.59 | 0.0847 | -- | 0.135 | 4.18 | 25.29 | 1976 | -- | -- |
| 24.35 | 0.23 | 10.1 | -0.0234 | 0.798 | -0.615 | -- | -0.16 | 0.139 | 4.19 | 25.06 | 1980 | -- | -- |
| 24.37 | 0.23 | 10.1 | -0.0571 | 0.799 | -0.604 | -- | -- | 0.132 | 4.18 | 25.2 | 1964 | -- | -- |
| 54.77 | 0.345 | 10.2 | -0.134 | -- | -0.69 | -- | 0.189 | 0.137 | -- | 34.9 | 2640 | -- | -- |
| 30 | 0.257 | 10.1 | 0.158 | 0.795 | -- | 0.0984 | -- | 0.273 | 4.02 | -- | -- | -- | -- |
| 30.03 | 0.257 | 10.1 | 0.156 | 0.796 | -- | -- | -- | 0.272 | 4.04 | -- | -- | -- | -- |
| 54.8 | 0.345 | 10.2 | -0.0862 | -- | -0.688 | -- | -- | 0.151 | -- | 49.64 | 2640 | -- | -- |
| 24.44 | 0.23 | 10.1 | -- | 0.798 | -0.579 | -- | -- | 0.143 | 4.17 | 25.2 | 1948 | -- | -- |
| 64.59 | 0.376 | 10.1 | 0.189 | -- | -- | -- | -- | 0.294 | -- | -- | -- | -- | -- |
| 30.68 | 0.259 | 10.1 | -- | 0.799 | -- | -- | -- | 0.255 | 4.04 | -- | -- | -- | -- |
| 54.96 | 0.345 | 10.1 | -- | -- | -0.652 | -- | -- | 0.167 | -- | 83.11 | 2638 | -- | -- |
| 65.53 | 0.378 | 10.1 | -- | -- | -- | -- | -- | 0.273 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20.39 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 15 | 15 |
| 2 | 20.45 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 17 | 10 |
| 3 | 20.46 | temperature | 20.0 | 270 | > th | dose independent | rect. | 13 | 17 |
| 4 | 20.48 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 12 |
| 7 | 20.64 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 19 | 8 |
| 20 | 20.90 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 16 | 12 |
| 22 | 20.92 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 19 | 9 |
| 78 | 21.45 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 15 | 17 |
| 83 | 21.50 | temperature | 30.0 | 10 | < th | dose dependent | sin | 13 | NA |
| 87 | 21.52 | temperature | 10.0 | 10 | > th | dose dependent | sin | 13 | NA |
| 109 | 21.69 | temperature | 20.0 | 270 | > th | dose independent | rect. | 11 | 10 |
| 172 | 22.00 | radiation | 40.0 | 270 | < th | dose independent | rect. | 11 | 19 |
| 216 | 22.16 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 12 | 16 |
| 239 | 22.22 | radiation | 40.0 | 270 | < th | dose independent | rect. | 10 | 21 |
| 315 | 22.43 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 1 | 12 |
| 319 | 22.44 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 17 | 7 |
| 326 | 22.46 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 18 | 5 |
| 400 | 22.62 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 24 | 7 |
| 554 | 22.94 | radiation | 20.0 | 270 | < th | dose dependent | sin | 7 | NA |
| 577 | 22.97 | radiation | 20.0 | 90 | < th | dose independent | rect. | 3 | 8 |
| 603 | 23.03 | radiation | 20.0 | 90 | < th | dose independent | rect. | 3 | 12 |
| 620 | 23.07 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 8 |
| 635 | 23.10 | radiation | 10.0 | 270 | < th | dose independent | rect. | 1 | 14 |
| 640 | 23.12 | radiation | 1.0 | 270 | > th | dose dependent | sin | 8 | NA |
| 662 | 23.16 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 14 | 12 |
| 665 | 23.17 | humidity | 90.0 | 270 | < th | dose independent | rect. | 7 | 4 |
| 666 | 23.17 | radiation | 10.0 | 270 | < th | dose independent | rect. | 1 | 8 |
| 692 | 23.20 | radiation | 10.0 | 270 | < th | dose independent | rect. | 1 | 10 |
| 695 | 23.20 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 696 | 23.20 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 12 | 10 |
| 716 | 23.23 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 6 | 5 |
| 738 | 23.26 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 2 |
| 752 | 23.28 | radiation | 20.0 | 90 | < th | dose independent | rect. | 3 | 10 |
| 753 | 23.28 | wind | 7.0 | 270 | < th | dose independent | rect. | 21 | 14 |
| 754 | 23.28 | radiation | 20.0 | 90 | < th | dose independent | rect. | 3 | 18 |
| 781 | 23.30 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 7 |
| 797 | 23.32 | humidity | 90.0 | 270 | < th | dose independent | rect. | 6 | 7 |
| 798 | 23.32 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 11 | 10 |
| 808 | 23.32 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 10 | 16 |
| 821 | 23.34 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 8 |
| 826 | 23.34 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 8 |
| 833 | 23.34 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 5 | 21 |
| 835 | 23.35 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 13 | 17 |
| 852 | 23.37 | radiation | 1.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 893 | 23.40 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 894 | 23.40 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 7 |
| 895 | 23.40 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 7 |
| 902 | 23.40 | radiation | 1.0 | 90 | > th | dose dependent | sin | 4 | NA |
| 908 | 23.40 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 12 |
| 948 | 23.45 | radiation | 1.0 | 270 | < th | dose independent | rect. | 14 | 12 |
| 950 | 23.45 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 16 |
| 955 | 23.45 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 2 | 1 |
| 957 | 23.45 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 24 | 1 |
| 958 | 23.45 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 24 | 3 |
| 971 | 23.46 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 14 |
| 973 | 23.46 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 7 | 4 |
| 980 | 23.46 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 14 |
| 985 | 23.47 | temperature | 10.0 | 270 | > th | dose independent | rect. | 21 | 14 |
| 986 | 23.47 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 14 |
| 993 | 23.47 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 11 | 14 |