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Os03g0689100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Histidine acid phosphatase family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.8 (0.0238) R2 : 0.782
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : 2.43 (0.0612) R2dE : 0.752 R2E : 0.725
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.481 (0.0502) R2dN8 : 0.0567 R2N8 : 0.0294
σ : 0.448
deviance : 92.43
__
_____
C
peak time of C : --
E
wheather : radiation
threshold : 6.143
memory length : 483
response mode : < th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
82.94 0.428 12.8 0.119 1.67 1.38 0.376 -0.678 0.471 3.86 29.87 365 -- --
83.4 0.425 12.8 0.109 1.67 1.38 0.0719 -- 0.468 3.84 29.79 366 -- --
83.2 0.425 12.8 0.119 1.67 1.38 -- -0.383 0.471 3.86 29.87 365 -- --
83.41 0.425 12.8 0.112 1.66 1.38 -- -- 0.467 3.84 29.8 366 -- --
93.43 0.45 12.9 -0.0516 -- 2.4 -- -0.618 0.368 -- 7.23 473 -- --
111.79 0.496 12.8 0.0535 2.33 -- 0.0973 -- 0.356 3.82 -- -- -- --
111.82 0.495 12.8 0.0521 2.33 -- -- -- 0.355 3.82 -- -- -- --
92.51 0.448 12.8 -0.0133 -- 2.43 -- -- 0.464 -- 6.15 483 -- --
83.75 0.426 12.8 -- 1.67 1.39 -- -- 0.458 3.84 29.79 366 -- --
409.88 0.946 12.8 0.148 -- -- -- -- 0.417 -- -- -- -- --
111.89 0.495 12.8 -- 2.33 -- -- -- 0.35 3.82 -- -- -- --
92.43 0.448 12.8 -- -- 2.43 -- -- 0.481 -- 6.143 483 -- --
410.46 0.946 12.8 -- -- -- -- -- 0.401 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 71.23 radiation 30.0 270 < th dose independent rect. 7 15
3 71.97 radiation 40.0 270 < th dose dependent rect. 7 15
4 72.28 radiation 40.0 270 < th dose independent rect. 16 21
16 74.58 radiation 40.0 270 < th dose independent rect. 17 18
52 76.99 radiation 40.0 270 < th dose dependent rect. 17 18
58 77.13 radiation 1.0 270 > th dose dependent rect. 11 21
68 77.46 radiation 40.0 270 < th dose dependent rect. 16 21
74 77.70 radiation 1.0 270 > th dose dependent rect. 11 6
98 78.07 radiation 1.0 270 > th dose dependent sin 19 NA
99 78.09 radiation 40.0 270 < th dose dependent sin 19 NA
140 78.93 humidity 90.0 270 < th dose dependent rect. 11 5
145 79.07 radiation 10.0 270 < th dose independent sin 20 NA
148 79.11 radiation 30.0 270 < th dose independent sin 18 NA
152 79.19 humidity 90.0 270 < th dose independent rect. 11 6
161 79.41 humidity 70.0 270 < th dose independent rect. 11 5
216 80.36 radiation 40.0 270 < th dose independent rect. 4 8
271 81.07 humidity 90.0 270 < th dose independent rect. 13 2
277 81.18 radiation 10.0 270 < th dose independent rect. 15 7
311 81.41 wind 9.0 270 < th dose independent rect. 23 17
316 81.43 radiation 20.0 270 > th dose independent rect. 11 5
330 81.58 radiation 20.0 270 > th dose independent rect. 11 21
332 81.59 humidity 70.0 270 < th dose independent rect. 12 3
341 81.67 wind 9.0 270 < th dose independent rect. 11 6
349 81.72 precipitation 0.1 270 < th dose independent rect. 11 6
350 81.72 precipitation 0.1 270 < th dose dependent rect. 11 6
359 81.86 radiation 30.0 270 < th dose dependent rect. 16 6
360 81.87 temperature 15.0 270 > th dose independent rect. 23 17
374 82.04 atmosphere 1015.0 270 < th dose independent rect. 16 7
377 82.11 wind 1.0 270 > th dose independent rect. 16 7
379 82.16 atmosphere 1015.0 270 < th dose independent rect. 17 5
383 82.19 temperature 15.0 270 > th dose independent rect. 11 6
407 82.33 radiation 1.0 270 > th dose independent rect. 11 6
409 82.37 precipitation 0.1 270 < th dose independent rect. 23 17
411 82.37 precipitation 0.1 270 < th dose dependent rect. 23 17
438 82.47 precipitation 0.1 270 < th dose independent rect. 22 19
439 82.47 precipitation 0.1 270 < th dose dependent rect. 22 19
443 82.49 atmosphere 1015.0 270 < th dose independent rect. 11 6
444 82.49 temperature 10.0 270 > th dose independent rect. 17 18
451 82.55 wind 9.0 270 < th dose independent rect. 16 7
453 82.56 wind 1.0 270 > th dose independent rect. 11 6
460 82.59 wind 9.0 270 < th dose independent rect. 17 18
464 82.65 temperature 10.0 270 > th dose independent rect. 16 7
496 82.79 radiation 30.0 270 > th dose independent sin 18 NA
500 82.86 wind 1.0 270 > th dose independent rect. 17 5
513 82.96 humidity 50.0 270 > th dose independent rect. 17 18
529 83.03 radiation 10.0 270 > th dose independent rect. 13 2
534 83.05 temperature 10.0 270 > th dose independent rect. 17 5
577 83.18 atmosphere 1015.0 270 < th dose independent rect. 17 18
600 83.37 humidity 50.0 270 > th dose independent rect. 17 5
615 83.41 precipitation 0.1 270 < th dose independent rect. 12 15
626 83.41 precipitation 0.1 270 < th dose dependent rect. 12 15
653 83.55 atmosphere 995.0 270 > th dose independent rect. 17 18
667 83.66 radiation 30.0 90 < th dose dependent sin 15 NA
689 83.84 radiation 40.0 270 < th dose dependent rect. 3 22
699 83.94 atmosphere 995.0 270 > th dose independent rect. 17 5
702 83.97 wind 9.0 270 < th dose independent rect. 12 15
711 84.03 precipitation 0.1 270 < th dose independent rect. 13 2
713 84.03 precipitation 0.1 270 < th dose independent rect. 17 5
714 84.03 precipitation 0.1 270 < th dose dependent rect. 13 2
715 84.03 precipitation 0.1 270 < th dose dependent rect. 17 5
736 84.11 wind 9.0 270 < th dose independent rect. 13 2
739 84.11 precipitation 0.1 270 < th dose independent rect. 17 18
755 84.11 precipitation 0.1 270 < th dose dependent rect. 17 18
762 84.17 radiation 40.0 43200 < th dose independent rect. 16 3
806 84.31 temperature 10.0 270 > th dose independent rect. 3 9
807 84.31 atmosphere 995.0 270 > th dose independent rect. 3 9
808 84.31 atmosphere 1015.0 270 < th dose independent rect. 3 9
809 84.31 temperature 10.0 270 > th dose independent rect. 12 15
810 84.32 humidity 70.0 270 > th dose independent rect. 6 16
844 84.42 wind 1.0 270 > th dose independent rect. 13 2
849 84.44 temperature 10.0 270 > th dose dependent rect. 17 18
856 84.48 temperature 10.0 270 > th dose independent rect. 13 2
858 84.48 atmosphere 1010.0 270 < th dose independent rect. 13 2
861 84.48 precipitation 0.1 270 < th dose independent rect. 16 7
863 84.48 temperature 10.0 270 > th dose independent rect. 15 22
864 84.48 precipitation 0.1 270 < th dose dependent rect. 16 7
868 84.51 atmosphere 995.0 270 > th dose independent rect. 16 7
881 84.58 atmosphere 1015.0 270 < th dose independent rect. 23 17
894 84.62 atmosphere 995.0 270 > th dose independent rect. 23 17
908 84.71 temperature 10.0 270 > th dose dependent rect. 11 5
940 84.81 precipitation 0.1 270 < th dose independent rect. 3 9
942 84.81 precipitation 0.1 270 < th dose dependent rect. 3 9
963 84.95 wind 9.0 270 < th dose independent rect. 3 9
968 84.97 temperature 10.0 270 > th dose dependent rect. 13 2
990 85.03 atmosphere 995.0 270 > th dose independent rect. 11 6
994 85.04 temperature 10.0 270 > th dose dependent rect. 17 5