BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0689100 Os03g0689100|AK064988
(1044 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G15070.2 | chr5:4876898-4885615 FORWARD LENGTH=1060 1664 0.0
AT3G01310.1 | chr3:94343-101603 REVERSE LENGTH=1057 1617 0.0
>AT5G15070.2 | chr5:4876898-4885615 FORWARD LENGTH=1060
Length = 1059
Score = 1664 bits (4310), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 812/1061 (76%), Positives = 904/1061 (85%), Gaps = 23/1061 (2%)
Query: 2 VVEGNGRADSITIGVCVMEKKVFCSPMEQILERLRAFGEFEIIIFGDKVILEDPIEIWPK 61
V EG G ITIGVCVMEKKVF +PM QI++R+ AFGEFEII FGDKVILEDP+E WP
Sbjct: 3 VEEGAGVDKKITIGVCVMEKKVFSAPMGQIMDRIHAFGEFEIIHFGDKVILEDPVESWPI 62
Query: 62 CDCLIAFYSSGFPLKKAEAYAALRRPFLVNELEPQHLLHDRRKVYEHLEKYGIPVPNYAL 121
CDCLIAFYSSG+PL+K +AY++LR+PFLVNEL+PQ+LLHDRRKVYEHLE YGIPVP YA
Sbjct: 63 CDCLIAFYSSGYPLEKVQAYSSLRKPFLVNELDPQYLLHDRRKVYEHLEMYGIPVPRYAC 122
Query: 122 VNREYPYQELDYFIEQEDFVEVHGKRFMKPFVEKPVNGDDHRIMIYYPNSAGGGMKELFR 181
VNR+ P ++LDYF+E+EDFVEV G+RF KPFVEKPVNGDDH IMIYYP+SAGGGMKELFR
Sbjct: 123 VNRKVPDEDLDYFVEEEDFVEVKGERFWKPFVEKPVNGDDHSIMIYYPSSAGGGMKELFR 182
Query: 182 KVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVKVYTVGPGYAHAEARKSPVVDGVVM 241
KVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVKVYTVGP YAHAEARKSPVVDGVVM
Sbjct: 183 KVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVKVYTVGPEYAHAEARKSPVVDGVVM 242
Query: 242 RNPDGKEVRYPVLLTPTEKQMSRDVCSAFRQMVCGFDLLRCDGRSYVCDVNGWSFVKNSY 301
RNPDGKEVRYPVLLTP EKQM+R+VC AFRQ VCGFDLLR +G SYVCDVNGWSFVKNSY
Sbjct: 243 RNPDGKEVRYPVLLTPAEKQMAREVCIAFRQAVCGFDLLRSEGSSYVCDVNGWSFVKNSY 302
Query: 302 KYYDDAACILRKIFLDAKAPHLSSTIPPSLPWKSNEPVQPTEGLTRQGSGIIGTFGQSEE 361
KYYDDAAC+LRK+FLDAKAPHLSSTIPP LPWK NEPVQ EGLTRQGSGIIGTFGQSEE
Sbjct: 303 KYYDDAACVLRKMFLDAKAPHLSSTIPPILPWKINEPVQSNEGLTRQGSGIIGTFGQSEE 362
Query: 362 LRSVIVVIRHGDRTPKQXXXXXXXXXXXXXXMLKYNGGKPRAETKLKSAVQLQDLLDATR 421
LR VI ++RHGDRTPKQ MLKYNGGKPRAETKLK+AVQLQDLLDATR
Sbjct: 363 LRCVIAIVRHGDRTPKQKVKLKVTEEKLLNLMLKYNGGKPRAETKLKTAVQLQDLLDATR 422
Query: 422 QLVPPTRSGRESDSDAEDLEHIEKLRQVKAVLEEGGHFSGIYRKVQLKPLKWIRVPKRCG 481
L+P RSG ESDSDAEDLEH +KLRQVKAVLEEGGHFSGIYRKVQLKPLKW+ VPK G
Sbjct: 423 MLIPRARSG-ESDSDAEDLEHADKLRQVKAVLEEGGHFSGIYRKVQLKPLKWVNVPKSDG 481
Query: 482 DGEEERPIEALMILKYGGVLTHAGRKQAEELGRFFRNNIYPGEGTGLLRLHSTYRHDLKI 541
+GEEERP+EALM+LKYGGVLTHAGRKQAEELGR+FRNN+YPGEGTGLLRLHSTYRHDLKI
Sbjct: 482 EGEEERPVEALMVLKYGGVLTHAGRKQAEELGRYFRNNMYPGEGTGLLRLHSTYRHDLKI 541
Query: 542 YSSDEGRVQMSAAAFAKGLLDLEGQLTPILVSLVSKDSSMLDGLEDASIEMDEAKARLHE 601
YSSDEGRVQMSAAAFAKGLLDLEGQLTPILVSLVSKDSSMLDGL++AS EM+ AKA+L+E
Sbjct: 542 YSSDEGRVQMSAAAFAKGLLDLEGQLTPILVSLVSKDSSMLDGLDNASSEMEAAKAQLNE 601
Query: 602 IIITNAKAKNTNEPVEFPWMVDGAGLPANASQLLPKMAKLTKEVTAQVXXXXXXXXXXXX 661
II +K + + E PWM DGAGLP +A + LP++ KL K+VT QV
Sbjct: 602 IITAGSKMVHDHVSSELPWMTDGAGLPPHADEHLPELVKLAKKVTEQVRLLAQDEHENLA 661
Query: 662 XTNSFSR---YDQAKAFGKTTIDVARIAAGLPCGSESFLLMFARWKKLERDLYNERKDRF 718
+++ YDQAKA GK+ IDV RIAAGLPCGSE FLLMFARW+KLERDLYNER++RF
Sbjct: 662 EPSAYDVVPPYDQAKALGKSNIDVGRIAAGLPCGSEGFLLMFARWRKLERDLYNERRERF 721
Query: 719 DITQIPDVYDSCKYDLLHNAHLNLEGLEELFKVAQLLADGVIPNEYGINPKQKLKIGSKI 778
DITQIPDVYDSCKYDLLHN+HL+L+GL+ELFKVAQLLADGVIPNEYGINP+QKLKIGSKI
Sbjct: 722 DITQIPDVYDSCKYDLLHNSHLDLKGLDELFKVAQLLADGVIPNEYGINPQQKLKIGSKI 781
Query: 779 ARRLLGKILIDLRNTREEAISVSDPKFTEDEAT---FLPTKESEYQQ-KLQTRNEDGRRS 834
ARRLLGKILIDLRNTREEA+SV++ K ++D+ + + KE Y Q KL ++++ RR
Sbjct: 782 ARRLLGKILIDLRNTREEAMSVAELKNSQDQVSVSLYSSRKEDRYSQPKLFVKSDELRRP 841
Query: 835 SSTSEKSLDQEDEDDRETKYRLDPKYANVKTPDRHVRTRLYFTSESHIHSLMNVLRYCNL 894
S+ K E++DD+ETKYRLDPKYANV TP+RHVRTRLYFTSESHIHSLMNVLRYCNL
Sbjct: 842 STGENK----EEDDDKETKYRLDPKYANVMTPERHVRTRLYFTSESHIHSLMNVLRYCNL 897
Query: 895 DECLQGEDSLVCQSALDRLHRTRELDYMSNIVLRMFENTE----------VPLEDEKRFR 944
DE LQGE+SLVCQSALDRL +T+ELDYMS +VLR+FENTE + L+D KRFR
Sbjct: 898 DESLQGEESLVCQSALDRLCKTKELDYMSYVVLRLFENTETLKHKNYCLQISLDDPKRFR 957
Query: 945 IEMTFSRGADLSPLEDKTSENTSLLQEHTLPIMGPERLQEVGSCLTLDKFEKMVRPFAMP 1004
IE+TFSRGADLSPLE K E SLL+EHTLPIMGPERLQEVGSCLTL+ EKM+RPFAMP
Sbjct: 958 IELTFSRGADLSPLEKKDEEAESLLREHTLPIMGPERLQEVGSCLTLETMEKMIRPFAMP 1017
Query: 1005 PEDFPPAAAPQAFSGYF-KGSGMLERLASLWPFHKGATNGK 1044
EDFPP P FSGYF K + +LERL LWPFHK +NGK
Sbjct: 1018 AEDFPPPCTPAGFSGYFSKSAAVLERLVKLWPFHKNTSNGK 1058
>AT3G01310.1 | chr3:94343-101603 REVERSE LENGTH=1057
Length = 1056
Score = 1617 bits (4188), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 800/1054 (75%), Positives = 895/1054 (84%), Gaps = 19/1054 (1%)
Query: 5 GNGRADSITIGVCVMEKKVFC------SPMEQILERLRAFGEFEIIIFGDKVILEDPIEI 58
+G + I IGVCVMEKKV C +PM +IL+RL++FGEFEI+ FGDKVILEDPIE
Sbjct: 7 ASGVGEKIKIGVCVMEKKVKCGSEVFSAPMGEILDRLQSFGEFEILHFGDKVILEDPIES 66
Query: 59 WPKCDCLIAFYSSGFPLKKAEAYAALRRPFLVNELEPQHLLHDRRKVYEHLEKYGIPVPN 118
WP CDCLIAF+SSG+PL+KA+AYAALR+PFLVNEL+PQ+LLHDRRKVYEHLE YGIPVP
Sbjct: 67 WPICDCLIAFHSSGYPLEKAQAYAALRKPFLVNELDPQYLLHDRRKVYEHLEMYGIPVPR 126
Query: 119 YALVNREYPYQELDYFIEQEDFVEVHGKRFMKPFVEKPVNGDDHRIMIYYPNSAGGGMKE 178
YA VNR+ P Q+L YF+E+EDFVEVHG+RF KPFVEKPVNGDDH IMIYYP+SAGGGMKE
Sbjct: 127 YACVNRKVPNQDLHYFVEEEDFVEVHGERFWKPFVEKPVNGDDHSIMIYYPSSAGGGMKE 186
Query: 179 LFRKVGNRSSEFHPDVRRVRREGSYIYEEFMPTGGTDVKVYTVGPGYAHAEARKSPVVDG 238
LFRK+GNRSSEFHPDVRRVRREGSYIYEEFM TGGTDVKVYTVGP YAHAEARKSPVVDG
Sbjct: 187 LFRKIGNRSSEFHPDVRRVRREGSYIYEEFMATGGTDVKVYTVGPEYAHAEARKSPVVDG 246
Query: 239 VVMRNPDGKEVRYPVLLTPTEKQMSRDVCSAFRQMVCGFDLLRCDGRSYVCDVNGWSFVK 298
VVMRN DGKEVRYPVLLTP EKQM+R+VC AFRQ VCGFDLLR +G SYVCDVNGWSFVK
Sbjct: 247 VVMRNTDGKEVRYPVLLTPAEKQMAREVCIAFRQAVCGFDLLRSEGCSYVCDVNGWSFVK 306
Query: 299 NSYKYYDDAACILRKIFLDAKAPHLSSTIPPSLPWKSNEPVQPTEGLTRQGSGIIGTFGQ 358
NSYKYYDDAAC+LRK+ LDAKAPHLSST+PP+LPWK NEPVQ EGLTRQGSGIIGTFGQ
Sbjct: 307 NSYKYYDDAACVLRKMCLDAKAPHLSSTLPPTLPWKVNEPVQSNEGLTRQGSGIIGTFGQ 366
Query: 359 SEELRSVIVVIRHGDRTPKQXXXXXXXXXXXXXXMLKYNGGKPRAETKLKSAVQLQDLLD 418
SEELR VI V+RHGDRTPKQ MLKYNGGKPRAETKLKSAVQLQDLLD
Sbjct: 367 SEELRCVIAVVRHGDRTPKQKVKLKVTEEKLLNLMLKYNGGKPRAETKLKSAVQLQDLLD 426
Query: 419 ATRQLVPPTRSGRESDSDAEDLEHIEKLRQVKAVLEEGGHFSGIYRKVQLKPLKWIRVPK 478
ATR LVP TR GRESDSDAEDLEH EKLRQVKAVLEEGGHFSGIYRKVQLKPLKW+++PK
Sbjct: 427 ATRMLVPRTRPGRESDSDAEDLEHAEKLRQVKAVLEEGGHFSGIYRKVQLKPLKWVKIPK 486
Query: 479 RCGDGEEERPIEALMILKYGGVLTHAGRKQAEELGRFFRNNIYPGEGTGLLRLHSTYRHD 538
GDGEEERP+EALM+LKYGGVLTHAGRKQAEELGR+FRNN+YPGEGTGLLRLHSTYRHD
Sbjct: 487 SDGDGEEERPVEALMVLKYGGVLTHAGRKQAEELGRYFRNNMYPGEGTGLLRLHSTYRHD 546
Query: 539 LKIYSSDEGRVQMSAAAFAKGLLDLEGQLTPILVSLVSKDSSMLDGLEDASIEMDEAKAR 598
LKIYSSDEGRVQMSAAAFAKGLLDLEGQLTPILVSLVSKDSSMLDGL++ASIEM+ AKAR
Sbjct: 547 LKIYSSDEGRVQMSAAAFAKGLLDLEGQLTPILVSLVSKDSSMLDGLDNASIEMEAAKAR 606
Query: 599 LHEIIITNAKAKNTNE--PVEFPWMVDGAGLPANASQLLPKMAKLTKEVTAQVXXXXXXX 656
L+EI+ + K + ++ +FPWM DGAGLP NA +LL ++ KLTK VT QV
Sbjct: 607 LNEIVTSGTKMIDDDQVSSEDFPWMTDGAGLPPNAHELLRELVKLTKNVTEQVRLLAMDE 666
Query: 657 XXXXXXT-NSFSRYDQAKAFGKTTIDVARIAAGLPCGSESFLLMFARWKKLERDLYNERK 715
+ YDQAKA GKT ID RIA+GLPCGSE FLLMFARW KL RDLYNERK
Sbjct: 667 DENLTEPYDIIPPYDQAKALGKTNIDSDRIASGLPCGSEGFLLMFARWIKLARDLYNERK 726
Query: 716 DRFDITQIPDVYDSCKYDLLHNAHLNLEGLEELFKVAQLLADGVIPNEYGINPKQKLKIG 775
DRFDITQIPDVYDSCKYDLLHN+HL+L+GL+ELFKVAQLLADGVIPNEYGINP+QKLKIG
Sbjct: 727 DRFDITQIPDVYDSCKYDLLHNSHLDLKGLDELFKVAQLLADGVIPNEYGINPQQKLKIG 786
Query: 776 SKIARRLLGKILIDLRNTREEAISVSDPKFTEDEATFLPTKESE---YQQKLQTRNEDGR 832
SKIARRL+GKILIDLRNTREEA+SV++ K ++++ L + E Q KL +++ R
Sbjct: 787 SKIARRLMGKILIDLRNTREEALSVAELKESQEQVLSLSASQREDRNSQPKLFINSDELR 846
Query: 833 RSSSTSEKSLDQEDEDDRETKYRLDPKYANVKTPDRHVRTRLYFTSESHIHSLMNVLRYC 892
R + + D + ETKYRLDPKYANVKTP+RHVRTRLYFTSESHIHSLMNVLRYC
Sbjct: 847 RPGTGDKDEDDDK-----ETKYRLDPKYANVKTPERHVRTRLYFTSESHIHSLMNVLRYC 901
Query: 893 NLDECLQGEDSLVCQSALDRLHRTRELDYMSNIVLRMFENTEVPLEDEKRFRIEMTFSRG 952
NLDE L GE+SL+CQ+AL+RL +T+ELDYMS IVLR+FENTEV LED KRFRIE+TFSRG
Sbjct: 902 NLDESLLGEESLICQNALERLCKTKELDYMSYIVLRLFENTEVSLEDPKRFRIELTFSRG 961
Query: 953 ADLSPLEDKTSENTSLLQEHTLPIMGPERLQEVGSCLTLDKFEKMVRPFAMPPEDFPPAA 1012
ADLSPL + E +LL+EHTLPIMGPERLQEVGSCL+L+ EKMVRPFAMP EDFPPA+
Sbjct: 962 ADLSPLRNNDDEAETLLREHTLPIMGPERLQEVGSCLSLETMEKMVRPFAMPAEDFPPAS 1021
Query: 1013 APQAFSGYF-KGSGMLERLASLWPFHKG-ATNGK 1044
P FSGYF K + +LERL +L+ +K ++NG+
Sbjct: 1022 TPVGFSGYFSKSAAVLERLVNLFHNYKNSSSNGR 1055
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.136 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 23,613,383
Number of extensions: 1072830
Number of successful extensions: 3186
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 3177
Number of HSP's successfully gapped: 2
Length of query: 1044
Length of database: 11,106,569
Length adjustment: 109
Effective length of query: 935
Effective length of database: 8,118,225
Effective search space: 7590540375
Effective search space used: 7590540375
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 117 (49.7 bits)