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Os03g0679000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.1 (0.0181) R2 : 0.0552
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.197 (0.0382) R2dN8 : 0.0713 R2N8 : 0.0552
σ : 0.342
deviance : 53.59
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
29.91 0.257 11.1 -0.565 0.525 0.383 -0.386 -0.677 -0.253 23.5 80 728 -- --
30.73 0.258 11.1 -0.601 0.525 0.378 -0.184 -- -0.262 23.5 80.42 747 -- --
30.42 0.257 11.1 -0.565 0.528 0.39 -- -0.461 -0.254 23.3 80.28 720 -- --
30.86 0.259 11.1 -0.602 0.529 0.389 -- -- -0.259 23.4 80.26 747 -- --
36.41 0.283 11.1 -0.584 -- 0.246 -- -0.346 -0.263 -- 80.28 720 -- --
33.58 0.272 11.1 -0.628 0.402 -- -0.337 -- -0.274 1.18 -- -- -- --
34.02 0.273 11.1 -0.616 0.402 -- -- -- -0.271 0.94 -- -- -- --
37.2 0.285 11.1 -0.593 -- 0.245 -- -- -0.265 -- 80.28 720 -- --
39.09 0.291 11.1 -- 0.563 0.499 -- -- -0.165 23.3 76 821 -- --
44.07 0.31 11.1 -0.601 -- -- -- -- -0.264 -- -- -- -- --
44.01 0.31 11.1 -- 0.392 -- -- -- -0.203 0.873 -- -- -- --
46.48 0.319 11.1 -- -- 0.25 -- -- -0.199 -- 80.28 720 -- --
53.59 0.342 11.1 -- -- -- -- -- -0.197 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 28.59 temperature 25 270 < th dose independent rect. 24 10
3 28.72 wind 1 270 < th dose independent rect. 4 1
4 28.74 wind 1 270 < th dose dependent rect. 4 1
7 28.79 humidity 80 720 < th dose dependent rect. 20 1
8 28.80 humidity 50 1440 < th dose independent rect. 16 1
9 28.83 humidity 50 1440 < th dose dependent rect. 16 1
15 29.05 temperature 30 720 > th dose dependent rect. 18 1
33 29.20 temperature 30 720 > th dose independent rect. 8 6
49 29.22 wind 1 90 < th dose dependent rect. 4 3
50 29.24 temperature 30 720 > th dose independent rect. 11 3
52 29.24 temperature 30 720 < th dose independent rect. 23 15
55 29.26 humidity 80 720 < th dose dependent rect. 18 14
57 29.34 wind 1 90 < th dose dependent rect. 4 7
60 29.38 temperature 25 270 < th dose independent rect. 1 4
66 29.42 wind 1 90 < th dose independent rect. 4 8
67 29.42 humidity 80 720 < th dose dependent rect. 19 4
68 29.42 humidity 50 720 > th dose dependent rect. 17 7
70 29.43 temperature 30 720 > th dose independent rect. 13 1
74 29.44 humidity 90 90 > th dose dependent rect. 4 1
78 29.47 humidity 80 720 < th dose independent rect. 20 19
80 29.48 temperature 25 90 < th dose independent rect. 3 8
87 29.51 humidity 80 720 < th dose independent rect. 18 21
91 29.53 temperature 25 270 < th dose independent sin 7 NA
108 29.54 humidity 80 720 > th dose independent rect. 18 20
109 29.54 humidity 80 720 < th dose dependent rect. 18 9
112 29.55 humidity 80 720 < th dose dependent rect. 18 7
115 29.55 wind 1 90 < th dose dependent rect. 4 17
130 29.59 humidity 80 1440 < th dose independent rect. 2 12
148 29.64 humidity 80 720 < th dose independent rect. 20 1
150 29.64 humidity 70 720 < th dose independent rect. 19 13
154 29.65 temperature 25 270 > th dose independent rect. 24 9
161 29.66 humidity 80 1440 > th dose independent rect. 1 13
166 29.67 temperature 25 90 < th dose independent rect. 3 6
179 29.69 atmosphere 1000 30 > th dose independent rect. 4 15
187 29.72 temperature 25 90 < th dose independent rect. 3 4
191 29.73 humidity 50 1440 > th dose independent rect. 16 1
195 29.73 temperature 10 90 > th dose dependent rect. 7 20
239 29.81 humidity 80 720 > th dose independent rect. 6 23
246 29.83 humidity 80 1440 < th dose independent sin 5 NA
252 29.83 atmosphere 1005 10 > th dose dependent rect. 14 9
253 29.84 humidity 90 10 > th dose independent rect. 4 2
258 29.84 temperature 30 720 < th dose independent rect. 21 17
260 29.84 humidity 80 720 > th dose independent rect. 23 23
283 29.88 wind 1 90 < th dose independent rect. 4 17
285 29.88 humidity 80 720 > th dose independent rect. 8 23
292 29.89 humidity 80 720 > th dose independent rect. 8 21
310 29.90 humidity 80 720 < th dose independent rect. 18 4
314 29.90 humidity 80 720 < th dose independent rect. 24 22
323 29.91 humidity 80 720 > th dose independent rect. 1 23
324 29.91 humidity 80 720 > th dose independent rect. 10 23
327 29.92 humidity 80 720 > th dose independent no NA NA
335 29.92 humidity 80 720 > th dose independent rect. 8 19
347 29.93 humidity 80 720 > th dose independent rect. 4 23
348 29.93 humidity 80 14400 < th dose dependent rect. 4 3
359 29.94 temperature 10 10 > th dose dependent rect. 6 22
376 29.96 humidity 80 720 < th dose independent rect. 9 23
379 29.97 humidity 80 720 > th dose independent rect. 21 1
419 30.00 humidity 90 10 > th dose dependent rect. 4 2
422 30.01 humidity 80 14400 > th dose independent rect. 5 1
423 30.01 humidity 80 14400 > th dose independent rect. 3 4
436 30.02 humidity 80 14400 < th dose independent rect. 4 3
446 30.03 humidity 80 1440 > th dose independent sin 4 NA
459 30.03 humidity 90 270 > th dose dependent rect. 2 3
463 30.04 humidity 80 720 < th dose independent no NA NA
471 30.04 humidity 80 720 < th dose independent rect. 9 19
475 30.04 humidity 80 720 < th dose independent rect. 5 22
497 30.05 humidity 80 720 < th dose independent rect. 9 13
521 30.06 humidity 80 720 < th dose independent sin 2 NA
529 30.06 humidity 80 720 > th dose independent rect. 6 16
533 30.06 humidity 80 720 < th dose independent rect. 13 23
567 30.08 humidity 80 14400 < th dose dependent rect. 23 9
584 30.09 temperature 20 90 > th dose dependent rect. 4 1
617 30.11 humidity 70 720 > th dose independent rect. 15 9
628 30.11 humidity 70 1440 > th dose dependent rect. 11 1
635 30.12 humidity 80 720 > th dose independent rect. 10 12
648 30.13 humidity 70 720 > th dose independent sin 11 NA
657 30.13 humidity 80 720 > th dose independent rect. 6 18
666 30.13 humidity 80 720 < th dose independent rect. 11 23
685 30.15 humidity 60 720 < th dose independent rect. 18 15
691 30.15 wind 3 10 < th dose dependent rect. 3 3
711 30.17 humidity 80 720 > th dose independent sin 14 NA
712 30.17 wind 7 1440 < th dose independent rect. 5 1
714 30.17 temperature 10 1440 > th dose independent rect. 5 1
717 30.17 temperature 30 1440 < th dose independent rect. 5 1
721 30.17 humidity 50 1440 > th dose independent rect. 5 1
730 30.17 atmosphere 995 1440 > th dose independent rect. 5 1
731 30.17 atmosphere 1015 1440 < th dose independent rect. 5 1
732 30.17 radiation 20 1440 < th dose independent rect. 5 1
750 30.17 temperature 10 1440 > th dose independent rect. 6 23
766 30.18 humidity 80 14400 < th dose independent rect. 22 10
808 30.19 humidity 70 1440 > th dose dependent rect. 9 4
847 30.21 humidity 70 720 > th dose independent rect. 19 8
897 30.23 temperature 30 720 > th dose independent sin 7 NA
923 30.24 humidity 80 14400 < th dose independent rect. 23 1
935 30.25 humidity 90 90 > th dose independent rect. 4 1
939 30.25 humidity 80 720 > th dose independent rect. 17 10
969 30.26 humidity 70 720 > th dose dependent rect. 8 16
995 30.28 humidity 70 720 > th dose dependent rect. 6 18
996 30.28 temperature 10 10 > th dose dependent rect. 8 19