Os03g0668900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0668900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 141.68 | 0.559 | 10.6 | 1.77 | 2.78 | 1.74 | 0.634 | 0.639 | 0.168 | 16.4 | 8.214 | 84 | 7.97 | 19.9 |
| 139.77 | 0.551 | 10.6 | 1.72 | 2.69 | 1.83 | 0.965 | -- | 0.201 | 16.3 | 5.617 | 94 | 8.3 | 19.4 |
| 139.7 | 0.55 | 10.6 | 1.79 | 2.69 | 1.87 | -- | 1.3 | 0.202 | 16.2 | 3.718 | 124 | 7.85 | 19.7 |
| 140.76 | 0.553 | 10.6 | 1.76 | 2.59 | 1.89 | -- | -- | 0.197 | 16.1 | 1.691 | 126 | 8.08 | 19.2 |
| 244.44 | 0.728 | 10.6 | 1.82 | -- | 3.82 | -- | 1.64 | 0.235 | -- | 7.323 | 163 | 8.1 | 16.4 |
| 191.35 | 0.649 | 10.7 | 1.95 | 3.77 | -- | 1.28 | -- | 0.235 | 16.6 | -- | -- | -- | -- |
| 195.7 | 0.655 | 10.7 | 1.96 | 3.78 | -- | -- | -- | 0.242 | 16.6 | -- | -- | -- | -- |
| 178.81 | 0.623 | 10.6 | 1.76 | -- | 3.75 | -- | -- | 0.204 | -- | -12.24 | 330 | 7.02 | 13.9 |
| 216.42 | 0.685 | 10.7 | -- | 2.28 | 2.43 | -- | -- | -0.041 | 16.1 | 10.42 | 138 | 7.93 | 19.2 |
| 955.95 | 1.44 | 10.6 | 1.82 | -- | -- | -- | -- | 0.142 | -- | -- | -- | -- | -- |
| 296.98 | 0.806 | 10.7 | -- | 3.74 | -- | -- | -- | 0.0232 | 16.6 | -- | -- | -- | -- |
| 252.01 | 0.739 | 10.7 | -- | -- | 3.94 | -- | -- | -0.048 | -- | 1.132 | 302 | 7.23 | 14.1 |
| 1042.87 | 1.51 | 10.7 | -- | -- | -- | -- | -- | -0.059 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 143.42 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 8 | 20 |
| 2 | 144.42 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 19 |
| 5 | 145.82 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 15 |
| 7 | 146.28 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 2 | 13 |
| 8 | 146.29 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 3 | 14 |
| 30 | 147.71 | atmosphere | 1000.0 | 90 | > th | dose dependent | rect. | 4 | 4 |
| 34 | 147.94 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 3 | 6 |
| 36 | 148.00 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 52 | 148.62 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 54 | 148.73 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 67 | 149.10 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 23 |
| 69 | 149.24 | wind | 5.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 70 | 149.24 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 21 |
| 71 | 149.24 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 82 | 149.47 | wind | 1.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 87 | 149.59 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 8 | 20 |
| 88 | 149.59 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 8 | 20 |
| 90 | 149.65 | radiation | 20.0 | 270 | < th | dose independent | rect. | 2 | 7 |
| 92 | 149.74 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 98 | 149.86 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 4 | 15 |
| 116 | 150.42 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 10 |
| 118 | 150.46 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 122 | 150.55 | radiation | 10.0 | 270 | < th | dose independent | rect. | 3 | 5 |
| 132 | 150.73 | radiation | 30.0 | 90 | < th | dose independent | rect. | 4 | 5 |
| 134 | 150.75 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 136 | 150.75 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 137 | 150.75 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 140 | 150.75 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 142 | 150.75 | radiation | 20.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 145 | 150.75 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 146 | 150.77 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 3 |
| 147 | 150.77 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 148 | 150.77 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 155 | 150.89 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 17 |
| 164 | 151.17 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 165 | 151.24 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 4 | 13 |
| 168 | 151.29 | humidity | 70.0 | 90 | > th | dose independent | rect. | 4 | 15 |
| 192 | 151.50 | temperature | 10.0 | 90 | > th | dose independent | rect. | 8 | 20 |
| 196 | 151.57 | atmosphere | 1000.0 | 10 | > th | dose dependent | rect. | 4 | 5 |
| 198 | 151.59 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 201 | 151.63 | humidity | 70.0 | 90 | > th | dose independent | rect. | 4 | 13 |
| 211 | 151.80 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 4 | 15 |
| 213 | 151.82 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 215 | 151.82 | temperature | 30.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 216 | 151.82 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 219 | 151.82 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 220 | 151.82 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 222 | 151.82 | radiation | 20.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 225 | 151.82 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 23 |
| 232 | 151.86 | radiation | 1.0 | 270 | > th | dose independent | sin | 1 | NA |
| 233 | 151.87 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 4 | 11 |
| 234 | 151.90 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 1 |
| 235 | 151.90 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 236 | 151.90 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 248 | 152.06 | radiation | 40.0 | 270 | < th | dose independent | rect. | 2 | 14 |
| 249 | 152.06 | radiation | 40.0 | 90 | < th | dose independent | rect. | 4 | 19 |
| 253 | 152.14 | radiation | 30.0 | 90 | < th | dose independent | rect. | 4 | 7 |
| 257 | 152.22 | radiation | 1.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 259 | 152.24 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 262 | 152.24 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 263 | 152.24 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 5 |
| 264 | 152.24 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 19 |
| 270 | 152.31 | radiation | 20.0 | 270 | < th | dose independent | rect. | 2 | 15 |
| 291 | 152.67 | humidity | 70.0 | 90 | > th | dose independent | rect. | 4 | 11 |
| 294 | 152.71 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 23 |
| 295 | 152.71 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 23 |
| 296 | 152.73 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 3 | 4 |
| 298 | 152.74 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 11 | 20 |
| 306 | 152.80 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 9 | 6 |
| 307 | 152.80 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 13 | 18 |
| 316 | 152.97 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 4 | 19 |
| 328 | 153.09 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 8 | 7 |
| 369 | 153.37 | humidity | 70.0 | 90 | > th | dose independent | rect. | 4 | 7 |
| 407 | 153.75 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 428 | 153.89 | radiation | 1.0 | 270 | < th | dose independent | sin | 1 | NA |
| 431 | 153.90 | wind | 9.0 | 1440 | < th | dose independent | rect. | 5 | 4 |
| 435 | 153.90 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 5 | 4 |
| 556 | 154.46 | radiation | 40.0 | 270 | < th | dose independent | rect. | 10 | 22 |
| 561 | 154.53 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 564 | 154.54 | radiation | 30.0 | 270 | < th | dose dependent | sin | 5 | NA |
| 606 | 154.73 | wind | 9.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 618 | 154.83 | radiation | 10.0 | 270 | < th | dose dependent | sin | 2 | NA |
| 629 | 154.89 | radiation | 20.0 | 90 | < th | dose independent | rect. | 4 | 19 |
| 633 | 154.92 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 8 | 7 |
| 643 | 154.96 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 5 | 15 |
| 644 | 154.96 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 1 | 21 |
| 651 | 155.00 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 8 | 20 |
| 672 | 155.10 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 679 | 155.18 | radiation | 40.0 | 270 | < th | dose independent | rect. | 11 | 20 |
| 681 | 155.19 | humidity | 80.0 | 10 | < th | dose independent | rect. | 9 | 6 |
| 705 | 155.34 | radiation | 1.0 | 90 | > th | dose dependent | rect. | 8 | 10 |
| 768 | 155.53 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 19 |
| 800 | 155.67 | humidity | 90.0 | 270 | < th | dose dependent | rect. | 9 | 1 |
| 823 | 155.82 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 2 | 16 |
| 866 | 156.07 | radiation | 10.0 | 270 | > th | dose independent | rect. | 16 | 21 |
| 888 | 156.13 | humidity | 80.0 | 90 | < th | dose independent | rect. | 8 | 7 |
| 897 | 156.17 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 22 |
| 934 | 156.37 | humidity | 60.0 | 90 | > th | dose dependent | sin | 2 | NA |
| 965 | 156.58 | humidity | 60.0 | 10 | > th | dose dependent | sin | 0 | NA |
| 970 | 156.59 | radiation | 1.0 | 270 | > th | dose dependent | sin | 7 | NA |
| 985 | 156.66 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 8 | 2 |