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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0663900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.9 (0.0316) R2 : 0.000335
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.026 (0.0665) R2dN8 : 0.000432 R2N8 : 0.000335
σ : 0.595
deviance : 162.48
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
155.34 0.586 2.93 -0.39 0.147 -0.411 -0.109 2.13 -0.0128 13.4 1.1 23 -- --
158.79 0.587 2.91 -0.294 0.136 -0.224 0.0625 -- 0.00396 13 1.199 20 -- --
155.39 0.581 2.93 -0.392 0.147 -0.411 -- 2.08 -0.0131 13.5 1.1 23 -- --
158.8 0.587 2.91 -0.291 0.135 -0.22 -- -- 0.00378 12.8 1.184 20 -- --
156.6 0.583 2.93 -0.385 -- -0.338 -- 2.02 -0.0173 -- 1.124 23 -- --
159.91 0.593 2.91 -0.259 0.109 -- -0.0376 -- -0.00241 10.8 -- -- -- --
159.92 0.592 2.91 -0.261 0.109 -- -- -- -0.00245 10.9 -- -- -- --
159.86 0.589 2.91 -0.288 -- -0.166 -- -- -0.000305 -- 1.122 19 -- --
160.99 0.591 2.9 -- 0.129 -0.168 -- -- 0.0297 12.5 1.2 19 -- --
160.65 0.592 2.91 -0.263 -- -- -- -- -0.0032 -- -- -- -- --
161.71 0.595 2.9 -- 0.111 -- -- -- 0.0266 11.1 -- -- -- --
162.01 0.593 2.9 -- -- -0.127 -- -- 0.0302 -- 1.151 19 -- --
162.48 0.595 2.9 -- -- -- -- -- 0.026 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 148.10 wind 1.0 90 < th dose dependent rect. 8 1
2 148.53 atmosphere 1015.0 1440 < th dose independent rect. 4 7
4 148.65 atmosphere 1015.0 1440 < th dose independent rect. 11 1
5 148.67 atmosphere 1015.0 1440 < th dose independent rect. 6 6
12 148.83 atmosphere 1015.0 1440 > th dose independent rect. 10 1
27 148.83 atmosphere 1015.0 1440 > th dose dependent rect. 10 1
47 149.74 wind 1.0 90 < th dose independent rect. 8 1
50 152.43 humidity 80.0 30 > th dose dependent rect. 9 1
52 152.78 wind 1.0 30 > th dose independent sin 17 NA
54 152.84 humidity 80.0 90 > th dose independent rect. 8 1
59 153.24 wind 1.0 30 < th dose independent rect. 23 1
62 153.39 temperature 20.0 10 > th dose independent rect. 2 1
66 153.43 wind 9.0 30 < th dose independent rect. 3 23
84 153.64 atmosphere 1010.0 30 < th dose dependent rect. 2 1
85 153.65 wind 1.0 30 < th dose independent rect. 15 12
94 153.68 wind 1.0 30 > th dose independent rect. 10 23
96 153.70 humidity 80.0 30 > th dose dependent rect. 2 1
97 153.72 humidity 90.0 30 > th dose independent rect. 2 1
98 153.72 wind 1.0 30 > th dose independent rect. 20 13
99 153.73 temperature 15.0 10 > th dose dependent rect. 2 1
106 153.79 wind 1.0 30 > th dose independent rect. 2 1
108 153.80 wind 3.0 30 < th dose independent rect. 2 1
112 153.83 wind 9.0 30 < th dose independent rect. 2 1
113 153.83 temperature 10.0 30 > th dose independent rect. 2 1
115 153.83 temperature 30.0 30 < th dose independent rect. 2 1
116 153.83 humidity 50.0 30 > th dose independent rect. 2 1
119 153.83 atmosphere 995.0 30 > th dose independent rect. 2 1
121 153.83 atmosphere 1010.0 30 < th dose independent rect. 2 1
123 153.83 radiation 1.0 30 < th dose independent rect. 2 1
128 153.83 precipitation 0.1 30 < th dose independent rect. 2 1
129 153.83 temperature 10.0 30 > th dose independent rect. 3 23
131 153.83 radiation 1.0 30 < th dose dependent rect. 2 1
136 153.83 precipitation 0.1 30 < th dose dependent rect. 2 1
140 153.87 wind 9.0 30 < th dose dependent rect. 2 1
151 153.93 atmosphere 995.0 30 > th dose dependent rect. 2 1
153 153.95 temperature 30.0 30 < th dose dependent rect. 2 1
164 154.03 radiation 10.0 90 < th dose dependent rect. 8 2
198 154.20 wind 1.0 90 < th dose independent rect. 6 1
200 154.22 wind 1.0 90 < th dose independent rect. 8 19
203 154.27 wind 1.0 90 < th dose dependent rect. 8 19
210 154.40 humidity 80.0 10 > th dose independent rect. 10 1
214 154.45 wind 1.0 30 > th dose independent rect. 17 16
219 154.50 wind 1.0 90 < th dose dependent rect. 6 2
222 154.57 temperature 25.0 90 < th dose independent rect. 8 3
223 154.59 radiation 30.0 90 < th dose independent rect. 9 1
237 154.78 atmosphere 995.0 10 > th dose independent rect. 3 23
248 154.85 radiation 1.0 4320 < th dose dependent rect. 3 1
258 154.95 temperature 25.0 90 > th dose independent rect. 1 3
261 154.96 wind 9.0 1440 < th dose independent rect. 3 1
262 154.96 temperature 10.0 1440 > th dose independent rect. 3 1
265 154.96 temperature 30.0 1440 < th dose independent rect. 3 1
269 154.96 humidity 50.0 1440 > th dose independent rect. 3 1
278 154.96 atmosphere 995.0 1440 > th dose independent rect. 3 1
279 154.96 radiation 1.0 1440 < th dose independent rect. 3 1
299 154.96 temperature 10.0 1440 > th dose independent rect. 4 23
332 155.02 wind 1.0 90 < th dose dependent rect. 8 17
337 155.07 wind 1.0 30 < th dose independent sin 17 NA
339 155.07 wind 1.0 30 > th dose independent rect. 13 20
340 155.09 temperature 25.0 10 < th dose independent rect. 10 1
342 155.09 temperature 25.0 90 > th dose dependent rect. 1 3
348 155.13 wind 1.0 14400 < th dose independent rect. 12 1
350 155.13 radiation 40.0 90 < th dose dependent rect. 9 1
356 155.17 wind 1.0 90 < th dose dependent rect. 23 2
359 155.18 humidity 90.0 270 > th dose dependent rect. 14 10
364 155.20 humidity 90.0 270 > th dose dependent rect. 16 8
366 155.21 wind 3.0 30 < th dose dependent rect. 22 5
367 155.21 wind 1.0 14400 < th dose dependent rect. 11 9
368 155.22 temperature 20.0 30 > th dose independent rect. 9 1
373 155.24 radiation 40.0 10 < th dose independent rect. 9 1
377 155.24 wind 9.0 43200 > th dose dependent rect. 10 1
381 155.25 precipitation 0.1 30 < th dose independent rect. 3 23
386 155.25 precipitation 0.1 30 < th dose dependent rect. 3 23
401 155.33 wind 3.0 30 < th dose dependent rect. 19 8
406 155.38 precipitation 0.1 4320 < th dose independent rect. 9 4
407 155.38 precipitation 0.1 4320 < th dose dependent rect. 9 4
421 155.43 humidity 90.0 270 > th dose dependent rect. 20 3
426 155.44 wind 1.0 14400 < th dose independent rect. 11 3
427 155.44 radiation 40.0 14400 < th dose independent rect. 16 15
430 155.45 atmosphere 995.0 43200 > th dose independent rect. 11 1
431 155.45 wind 1.0 30 < th dose independent rect. 6 21
433 155.46 wind 9.0 14400 < th dose independent rect. 1 3
440 155.47 wind 9.0 30 < th dose independent rect. 10 23
444 155.50 humidity 70.0 90 < th dose independent rect. 19 1
463 155.56 humidity 50.0 10 > th dose independent rect. 10 23
473 155.58 wind 1.0 14400 < th dose independent rect. 11 9
474 155.58 temperature 10.0 720 > th dose independent rect. 13 9
475 155.58 temperature 10.0 720 > th dose independent rect. 22 15
476 155.58 atmosphere 995.0 720 > th dose independent rect. 22 15
478 155.59 temperature 10.0 1440 > th dose independent rect. 4 6
481 155.59 atmosphere 995.0 1440 > th dose independent rect. 4 6
483 155.59 temperature 10.0 1440 > th dose independent rect. 10 18
490 155.61 wind 1.0 14400 > th dose independent rect. 12 1
492 155.61 atmosphere 1015.0 43200 > th dose dependent rect. 19 3
498 155.64 precipitation 0.1 4320 > th dose independent rect. 9 4
499 155.64 humidity 50.0 1440 > th dose independent rect. 4 6
500 155.64 atmosphere 995.0 720 > th dose independent rect. 13 9
502 155.64 humidity 50.0 10 > th dose independent rect. 3 23
504 155.64 precipitation 0.1 4320 > th dose dependent rect. 9 4
506 155.64 atmosphere 1015.0 43200 > th dose dependent rect. 16 7
508 155.65 wind 1.0 14400 < th dose independent rect. 11 7
509 155.65 wind 1.0 14400 < th dose dependent rect. 16 2
514 155.66 atmosphere 995.0 43200 < th dose independent rect. 10 1
517 155.66 temperature 15.0 30 > th dose independent rect. 9 18
518 155.66 atmosphere 995.0 43200 < th dose dependent rect. 10 1
523 155.67 precipitation 0.1 4320 > th dose independent rect. 11 2
525 155.67 atmosphere 1015.0 43200 > th dose independent rect. 15 6
528 155.67 precipitation 0.1 4320 > th dose dependent rect. 11 2
533 155.68 wind 1.0 90 < th dose independent rect. 6 6
534 155.68 precipitation 0.1 30 < th dose independent rect. 9 18
538 155.68 precipitation 0.1 30 < th dose dependent rect. 9 18
540 155.69 atmosphere 1015.0 43200 > th dose dependent rect. 20 1
541 155.69 wind 1.0 14400 < th dose dependent rect. 16 4
546 155.70 precipitation 0.1 4320 < th dose independent rect. 11 2
547 155.70 radiation 1.0 14400 > th dose independent rect. 9 3
548 155.70 wind 9.0 30 < th dose independent rect. 3 6
550 155.70 temperature 10.0 30 > th dose independent rect. 3 6
552 155.70 temperature 30.0 30 < th dose independent rect. 3 6
553 155.70 humidity 50.0 30 > th dose independent rect. 3 6
555 155.70 atmosphere 995.0 30 > th dose independent rect. 3 6
556 155.70 atmosphere 1015.0 30 < th dose independent rect. 3 6
557 155.70 precipitation 0.1 30 < th dose independent rect. 3 6
561 155.70 atmosphere 995.0 30 > th dose independent rect. 9 18
563 155.70 precipitation 0.1 4320 < th dose dependent rect. 11 2
564 155.70 precipitation 0.1 30 < th dose dependent rect. 3 6
573 155.72 wind 9.0 14400 < th dose independent rect. 3 1
577 155.73 radiation 1.0 14400 < th dose independent rect. 9 3
579 155.73 temperature 10.0 720 > th dose independent rect. 1 9
580 155.73 humidity 50.0 720 > th dose independent rect. 1 9
581 155.73 atmosphere 995.0 720 > th dose independent rect. 1 9
582 155.73 temperature 10.0 720 > th dose independent rect. 10 15
588 155.74 radiation 40.0 30 < th dose independent rect. 3 6
596 155.76 wind 9.0 720 < th dose independent rect. 1 9
597 155.76 radiation 40.0 30 < th dose independent rect. 10 23
604 155.77 wind 1.0 30 > th dose independent rect. 3 23
611 155.78 atmosphere 995.0 720 > th dose independent rect. 10 15
612 155.78 precipitation 0.1 720 < th dose independent rect. 22 15
618 155.78 precipitation 0.1 720 < th dose dependent rect. 22 15
620 155.80 radiation 1.0 720 > th dose independent rect. 10 5
628 155.82 radiation 1.0 720 < th dose independent rect. 14 1
629 155.82 atmosphere 1015.0 43200 < th dose independent rect. 18 2
630 155.82 radiation 30.0 14400 < th dose independent rect. 4 3
632 155.82 radiation 1.0 720 < th dose dependent rect. 14 1
643 155.84 wind 1.0 14400 > th dose independent rect. 11 7
656 155.85 atmosphere 995.0 10 > th dose dependent rect. 9 8
658 155.85 atmosphere 995.0 30 > th dose dependent rect. 9 11
662 155.86 wind 1.0 14400 > th dose independent rect. 11 9
670 155.87 wind 1.0 10 > th dose independent rect. 9 11
671 155.87 wind 3.0 10 < th dose dependent rect. 8 1
693 155.89 temperature 15.0 30 > th dose dependent rect. 9 1
694 155.89 humidity 70.0 90 < th dose dependent rect. 19 1
707 155.90 atmosphere 1015.0 43200 > th dose independent rect. 14 1
708 155.90 atmosphere 1015.0 43200 > th dose dependent sin 17 NA
712 155.91 atmosphere 995.0 14400 > th dose independent rect. 4 4
717 155.91 atmosphere 1015.0 43200 > th dose dependent rect. 13 2
719 155.91 atmosphere 1015.0 43200 > th dose dependent rect. 12 5
720 155.91 wind 1.0 90 < th dose dependent rect. 6 6
729 155.92 wind 1.0 14400 < th dose dependent rect. 11 4
730 155.92 temperature 10.0 30 > th dose dependent rect. 3 6
736 155.93 humidity 50.0 30 > th dose independent rect. 9 18
749 155.94 atmosphere 1015.0 30 < th dose independent rect. 9 18
761 155.95 atmosphere 1015.0 43200 < th dose independent rect. 14 6
780 155.97 radiation 1.0 14400 < th dose dependent rect. 10 2
785 155.98 wind 1.0 10 > th dose independent rect. 9 1
788 155.98 precipitation 0.1 720 < th dose independent rect. 1 9
789 155.98 atmosphere 995.0 10 > th dose independent rect. 9 11
790 155.98 humidity 70.0 90 < th dose independent rect. 19 13
799 155.98 precipitation 0.1 720 < th dose dependent rect. 1 9
805 155.99 radiation 40.0 14400 < th dose independent rect. 16 7
806 155.99 radiation 40.0 14400 < th dose independent rect. 16 11
808 155.99 temperature 30.0 10 < th dose independent rect. 3 23
822 156.01 radiation 10.0 90 < th dose independent rect. 8 3
823 156.01 temperature 10.0 10 > th dose independent rect. 9 11
826 156.01 atmosphere 1015.0 10 < th dose independent rect. 9 11
827 156.01 wind 9.0 10 < th dose independent rect. 20 13
828 156.01 temperature 10.0 10 > th dose independent rect. 20 13
829 156.01 temperature 30.0 10 < th dose independent rect. 20 13
830 156.01 humidity 50.0 10 > th dose independent rect. 20 13
832 156.01 atmosphere 995.0 10 > th dose independent rect. 20 13
836 156.02 wind 1.0 10 < th dose independent rect. 8 1
851 156.04 wind 3.0 14400 > th dose independent rect. 17 1
852 156.04 wind 3.0 14400 < th dose independent rect. 17 1
857 156.04 precipitation 0.1 10 < th dose independent rect. 9 11
860 156.04 precipitation 0.1 10 < th dose dependent rect. 9 11
871 156.05 atmosphere 1015.0 30 < th dose dependent rect. 3 6
880 156.06 wind 1.0 30 > th dose independent rect. 13 23
887 156.07 wind 1.0 14400 < th dose independent rect. 16 4
896 156.08 radiation 1.0 14400 < th dose independent rect. 8 8
897 156.08 radiation 1.0 30 > th dose independent rect. 9 9
908 156.09 humidity 80.0 10 < th dose independent rect. 22 3
910 156.09 radiation 1.0 14400 > th dose independent rect. 8 8
922 156.10 radiation 30.0 14400 < th dose independent rect. 1 6
925 156.10 humidity 50.0 720 > th dose independent rect. 22 15
926 156.10 temperature 25.0 4320 < th dose dependent rect. 11 1
928 156.10 humidity 80.0 30 < th dose dependent rect. 22 2
933 156.11 atmosphere 1010.0 270 > th dose independent rect. 5 1
964 156.12 atmosphere 1000.0 30 > th dose independent rect. 9 1
972 156.13 humidity 80.0 720 < th dose independent rect. 24 1
974 156.13 atmosphere 1010.0 90 > th dose independent rect. 8 1
975 156.13 atmosphere 1010.0 10 > th dose independent rect. 9 1