Os03g0662000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Dihydrolipoyl dehydrogenase, mitochondrial precursor (EC 1.8.1.4) (Glycine cleavage system L protein) (Dihydrolipoamide dehydrogenase).
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Os03g0662000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Dihydrolipoyl dehydrogenase, mitochondrial precursor (EC 1.8.1.4) (Glycine cleavage system L protein) (Dihydrolipoamide dehydrogenase).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 52.5 | 0.34 | 9.1 | -0.314 | 0.251 | -2.43 | 0.428 | -2.24 | 0.368 | 5.39 | 19.58 | 4468 | -- | -- |
| 53.35 | 0.34 | 9.14 | -0.234 | 0.269 | -1.75 | 0.513 | -- | 0.4 | 5.29 | 19.2 | 3003 | -- | -- |
| 52.04 | 0.336 | 9.05 | -0.339 | 0.27 | -3.74 | -- | -4.81 | 0.395 | 5.63 | 18.6 | 4668 | -- | -- |
| 54.04 | 0.342 | 9.15 | -0.226 | 0.242 | -1.71 | -- | -- | 0.393 | 5.35 | 19.26 | 3047 | -- | -- |
| 54.66 | 0.344 | 9.06 | -0.439 | -- | -3.87 | -- | -4.89 | 0.366 | -- | 19.03 | 5650 | -- | -- |
| 77.3 | 0.412 | 9.1 | 0.354 | 0.279 | -- | 0.316 | -- | 0.599 | 5.37 | -- | -- | -- | -- |
| 77.54 | 0.412 | 9.1 | 0.355 | 0.282 | -- | -- | -- | 0.597 | 5.5 | -- | -- | -- | -- |
| 57.05 | 0.352 | 9.15 | -0.221 | -- | -1.75 | -- | -- | 0.396 | -- | 19.22 | 2972 | -- | -- |
| 54.97 | 0.345 | 9.14 | -- | 0.238 | -1.56 | -- | -- | 0.439 | 5.43 | 19.06 | 3003 | -- | -- |
| 81.67 | 0.422 | 9.11 | 0.364 | -- | -- | -- | -- | 0.604 | -- | -- | -- | -- | -- |
| 80.86 | 0.421 | 9.11 | -- | 0.288 | -- | -- | -- | 0.558 | 5.45 | -- | -- | -- | -- |
| 57.97 | 0.355 | 9.15 | -- | -- | -1.61 | -- | -- | 0.439 | -- | 19.01 | 2958 | -- | -- |
| 85.17 | 0.431 | 9.12 | -- | -- | -- | -- | -- | 0.564 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 48.23 | humidity | 50 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 2 | 48.38 | humidity | 50 | 43200 | < th | dose dependent | rect. | 19 | 20 |
| 4 | 48.43 | humidity | 50 | 43200 | < th | dose dependent | rect. | 4 | 11 |
| 31 | 48.65 | humidity | 50 | 43200 | < th | dose dependent | sin | 7 | NA |
| 51 | 48.81 | humidity | 50 | 43200 | < th | dose dependent | rect. | 12 | 21 |
| 112 | 49.21 | humidity | 50 | 43200 | < th | dose dependent | rect. | 4 | 18 |
| 120 | 49.22 | humidity | 50 | 43200 | < th | dose dependent | no | NA | NA |
| 208 | 49.40 | humidity | 50 | 43200 | < th | dose dependent | rect. | 12 | 9 |
| 281 | 49.63 | humidity | 50 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 291 | 49.64 | humidity | 50 | 43200 | < th | dose independent | rect. | 18 | 21 |
| 308 | 49.77 | humidity | 50 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 309 | 49.78 | humidity | 50 | 43200 | < th | dose independent | sin | 7 | NA |
| 312 | 49.83 | humidity | 50 | 43200 | > th | dose independent | rect. | 18 | 21 |
| 322 | 49.85 | humidity | 50 | 43200 | > th | dose independent | sin | 7 | NA |
| 331 | 49.92 | humidity | 50 | 43200 | < th | dose independent | rect. | 3 | 12 |
| 356 | 50.01 | humidity | 60 | 43200 | < th | dose dependent | rect. | 5 | 5 |
| 364 | 50.11 | humidity | 50 | 43200 | > th | dose independent | rect. | 2 | 13 |
| 366 | 50.11 | humidity | 50 | 43200 | > th | dose independent | rect. | 23 | 16 |
| 389 | 50.22 | humidity | 60 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 429 | 50.40 | humidity | 60 | 43200 | < th | dose dependent | rect. | 22 | 12 |
| 456 | 50.61 | humidity | 50 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 464 | 50.68 | humidity | 50 | 43200 | < th | dose independent | rect. | 11 | 4 |
| 472 | 50.74 | humidity | 50 | 43200 | < th | dose independent | rect. | 11 | 22 |
| 520 | 50.91 | humidity | 50 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 555 | 50.99 | humidity | 60 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 577 | 51.01 | humidity | 60 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 595 | 51.02 | humidity | 60 | 43200 | < th | dose independent | rect. | 4 | 6 |
| 675 | 51.10 | humidity | 50 | 43200 | < th | dose independent | no | NA | NA |
| 677 | 51.10 | humidity | 50 | 43200 | < th | dose independent | rect. | 3 | 19 |
| 866 | 51.22 | humidity | 50 | 43200 | > th | dose independent | rect. | 11 | 22 |
| 876 | 51.24 | humidity | 60 | 43200 | < th | dose independent | rect. | 21 | 13 |
| 939 | 51.32 | temperature | 20 | 4320 | < th | dose dependent | rect. | 23 | 2 |