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Os03g0661500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.71 (0.0201) R2 : 0.622
β1 : 0.946 (0.0737) R2dD : 0.142 R2D : 0.119
β2 : 1.22 (0.0518) R2dC : 0.463 R2C : 0.472
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.225 (0.043) R2dN8 : 0.0304 R2N8 : 0.00647
σ : 0.379
deviance : 65.37
__
_____
C
peak time of C : 4.54
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
58.04 0.358 8.7 0.902 1.04 0.291 -1.33 1.36 0.229 4.97 60.31 7 -- --
61.36 0.365 8.69 0.921 0.998 0.359 -0.743 -- 0.279 5.13 79 4 -- --
61.49 0.368 8.7 0.918 1.04 0.275 -- 0.728 0.243 4.98 65.58 14 -- --
62.51 0.368 8.7 0.927 1.01 0.322 -- -- 0.269 4.92 79 47 -- --
85 0.429 8.69 0.893 -- 1.07 -- 0.272 0.326 -- 70 248 -- --
64.84 0.377 8.71 0.943 1.23 -- -0.457 -- 0.223 4.6 -- -- -- --
65.37 0.379 8.71 0.946 1.22 -- -- -- 0.225 4.54 -- -- -- --
85.17 0.43 8.7 0.92 -- 1.09 -- -- 0.335 -- 70 256 -- --
84.58 0.428 8.71 -- 0.995 0.393 -- -- 0.191 4.89 81.97 52 -- --
145.23 0.563 8.72 0.993 -- -- -- -- 0.257 -- -- -- -- --
88.96 0.441 8.73 -- 1.24 -- -- -- 0.12 4.52 -- -- -- --
107.04 0.482 8.72 -- -- 1.11 -- -- 0.239 -- 72.51 257 -- --
171.26 0.611 8.74 -- -- -- -- -- 0.147 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 56.02 radiation 10.0 720 < th dose dependent rect. 14 8
5 56.12 radiation 1.0 720 < th dose independent rect. 16 5
6 56.13 radiation 1.0 720 < th dose independent rect. 14 7
12 56.34 humidity 50.0 270 > th dose dependent rect. 16 14
41 56.87 radiation 10.0 720 < th dose dependent rect. 14 16
42 56.93 radiation 1.0 720 < th dose independent rect. 14 15
74 57.32 precipitation 0.1 720 < th dose independent rect. 21 22
76 57.32 precipitation 0.1 720 < th dose dependent rect. 21 22
116 57.53 radiation 1.0 720 < th dose dependent sin 23 NA
120 57.54 temperature 30.0 270 < th dose independent rect. 16 14
128 57.58 precipitation 0.1 720 < th dose independent rect. 7 17
130 57.58 precipitation 0.1 720 < th dose dependent rect. 7 17
131 57.59 humidity 70.0 270 > th dose independent rect. 17 13
132 57.59 humidity 50.0 90 > th dose dependent rect. 11 22
148 57.67 radiation 10.0 720 < th dose dependent sin 16 NA
159 57.69 humidity 90.0 30 < th dose independent rect. 9 10
171 57.72 atmosphere 995.0 720 > th dose independent rect. 9 13
176 57.74 atmosphere 995.0 720 > th dose independent rect. 10 11
203 57.78 precipitation 0.1 720 < th dose independent rect. 12 15
205 57.78 precipitation 0.1 720 < th dose dependent rect. 12 15
208 57.78 humidity 60.0 10 > th dose dependent rect. 19 23
216 57.80 atmosphere 995.0 720 > th dose independent rect. 10 20
223 57.81 temperature 30.0 90 < th dose dependent rect. 13 8
262 57.87 precipitation 0.1 720 < th dose independent rect. 15 9
264 57.87 precipitation 0.1 720 < th dose dependent rect. 15 9
267 57.87 humidity 90.0 10 < th dose dependent rect. 9 19
284 57.90 radiation 10.0 270 < th dose dependent rect. 1 22
291 57.91 humidity 50.0 10 > th dose dependent rect. 11 23
301 57.93 humidity 90.0 10 < th dose dependent rect. 9 13
305 57.94 radiation 1.0 720 < th dose dependent sin 14 NA
307 57.95 precipitation 0.1 720 < th dose independent rect. 12 7
309 57.95 precipitation 0.1 720 < th dose dependent rect. 12 7
310 57.95 humidity 90.0 10 < th dose dependent rect. 9 10
317 57.96 temperature 30.0 90 < th dose dependent rect. 15 6
323 57.97 radiation 1.0 720 < th dose independent sin 17 NA
341 57.99 radiation 1.0 270 < th dose independent rect. 1 21
347 57.99 humidity 90.0 10 < th dose dependent rect. 9 17
362 58.01 precipitation 0.1 720 < th dose independent rect. 15 18
367 58.01 precipitation 0.1 720 < th dose dependent rect. 15 18
370 58.01 humidity 50.0 10 > th dose dependent rect. 15 23
388 58.04 humidity 60.0 10 > th dose dependent rect. 5 23
389 58.05 radiation 1.0 720 < th dose independent sin 14 NA
399 58.06 radiation 10.0 270 < th dose dependent rect. 23 22
412 58.08 humidity 80.0 90 < th dose independent sin 0 NA
417 58.08 humidity 60.0 10 > th dose dependent rect. 1 23
418 58.08 humidity 50.0 10 > th dose dependent rect. 13 23
424 58.09 humidity 60.0 10 > th dose dependent no NA NA
434 58.10 radiation 1.0 270 < th dose independent rect. 23 22
448 58.12 radiation 1.0 270 < th dose independent sin 0 NA
449 58.12 radiation 10.0 270 > th dose independent rect. 15 22
453 58.12 temperature 30.0 10 < th dose dependent rect. 12 11
473 58.14 precipitation 0.1 720 < th dose independent rect. 5 14
477 58.14 precipitation 0.1 720 < th dose dependent rect. 5 14
483 58.15 precipitation 0.1 720 < th dose independent sin 2 NA
484 58.15 precipitation 0.1 720 < th dose dependent sin 2 NA
516 58.17 humidity 60.0 10 > th dose dependent rect. 17 23
544 58.20 humidity 60.0 10 > th dose dependent rect. 3 23
550 58.22 radiation 40.0 720 < th dose independent rect. 23 10
552 58.22 humidity 80.0 10 > th dose independent rect. 13 18
564 58.22 humidity 90.0 10 < th dose dependent rect. 16 23
568 58.24 radiation 1.0 720 > th dose independent rect. 13 6
586 58.25 atmosphere 1015.0 720 < th dose independent rect. 24 6
596 58.25 humidity 70.0 90 > th dose dependent rect. 17 22
607 58.26 humidity 90.0 10 < th dose dependent rect. 21 23
631 58.27 humidity 70.0 90 > th dose dependent rect. 23 23
637 58.28 humidity 50.0 720 > th dose dependent rect. 15 6
642 58.28 humidity 90.0 90 < th dose dependent rect. 16 23
660 58.30 radiation 40.0 720 < th dose independent rect. 7 2
663 58.30 atmosphere 995.0 720 > th dose independent rect. 17 14
689 58.32 humidity 90.0 10 < th dose independent sin 22 NA
696 58.32 humidity 50.0 720 > th dose dependent rect. 13 8
719 58.34 precipitation 0.1 270 < th dose independent sin 22 NA
722 58.34 humidity 90.0 90 < th dose independent rect. 21 22
723 58.34 humidity 90.0 10 < th dose dependent sin 23 NA
724 58.34 precipitation 0.1 270 < th dose dependent sin 22 NA
744 58.35 humidity 50.0 720 > th dose dependent rect. 11 10
754 58.36 precipitation 0.1 90 < th dose independent rect. 7 12
759 58.36 precipitation 0.1 90 < th dose dependent rect. 7 12
764 58.37 humidity 50.0 720 > th dose dependent rect. 17 4
777 58.38 atmosphere 1015.0 720 < th dose independent rect. 3 9
787 58.38 humidity 90.0 10 < th dose dependent rect. 23 23
800 58.39 humidity 90.0 10 < th dose dependent rect. 23 21
818 58.40 humidity 90.0 10 < th dose dependent rect. 1 21
821 58.40 humidity 90.0 10 < th dose dependent rect. 1 23
827 58.41 humidity 90.0 10 < th dose dependent no NA NA
830 58.41 humidity 90.0 10 < th dose dependent rect. 2 17
841 58.41 humidity 90.0 10 < th dose dependent rect. 3 23
842 58.42 humidity 80.0 90 < th dose independent rect. 8 7
888 58.44 humidity 80.0 90 < th dose independent rect. 7 20
906 58.44 radiation 1.0 270 > th dose dependent rect. 14 22
924 58.46 precipitation 0.1 720 > th dose independent rect. 5 13
929 58.46 humidity 70.0 10 < th dose independent rect. 16 22
930 58.46 humidity 80.0 90 > th dose independent rect. 15 23
931 58.46 temperature 30.0 270 < th dose dependent rect. 17 1
988 58.49 humidity 80.0 90 > th dose independent rect. 17 22
989 58.49 humidity 80.0 90 > th dose independent rect. 23 23
999 58.50 temperature 15.0 1440 > th dose independent rect. 10 10