Os03g0659800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0659800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 162.19 | 0.598 | 3.27 | -0.116 | 0.608 | -0.704 | 0.245 | 1.03 | 0.247 | 19.1 | 89 | 350 | -- | -- |
| 165.66 | 0.599 | 3.25 | -0.18 | 0.591 | -0.69 | 0.762 | -- | 0.243 | 18.7 | 88 | 342 | -- | -- |
| 162.32 | 0.593 | 3.27 | -0.114 | 0.61 | -0.706 | -- | 1.11 | 0.248 | 19.1 | 88.9 | 352 | -- | -- |
| 167.14 | 0.602 | 3.25 | -0.19 | 0.597 | -0.681 | -- | -- | 0.242 | 18.9 | 88.86 | 342 | -- | -- |
| 174.8 | 0.616 | 3.26 | -0.0604 | -- | -0.404 | -- | 1.08 | 0.206 | -- | 89.58 | 350 | -- | -- |
| 184.24 | 0.636 | 3.27 | -0.0509 | 0.228 | -- | 0.367 | -- | 0.146 | 21.5 | -- | -- | -- | -- |
| 184.62 | 0.636 | 3.27 | -0.0664 | 0.227 | -- | -- | -- | 0.144 | 22.3 | -- | -- | -- | -- |
| 178.57 | 0.622 | 3.25 | -0.116 | -- | -0.354 | -- | -- | 0.199 | -- | 88 | 230 | -- | -- |
| 168.06 | 0.604 | 3.25 | -- | 0.584 | -0.657 | -- | -- | 0.259 | 18.9 | 88.81 | 342 | -- | -- |
| 187.76 | 0.64 | 3.26 | -0.0629 | -- | -- | -- | -- | 0.145 | -- | -- | -- | -- | -- |
| 184.74 | 0.636 | 3.26 | -- | 0.226 | -- | -- | -- | 0.152 | 22.3 | -- | -- | -- | -- |
| 178.98 | 0.623 | 3.25 | -- | -- | -0.343 | -- | -- | 0.204 | -- | 88.47 | 230 | -- | -- |
| 187.87 | 0.64 | 3.26 | -- | -- | -- | -- | -- | 0.152 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 160.12 | temperature | 20.0 | 720 | > th | dose independent | rect. | 9 | 8 |
| 2 | 161.91 | humidity | 90.0 | 90 | < th | dose independent | rect. | 9 | 21 |
| 3 | 162.13 | humidity | 90.0 | 270 | < th | dose independent | rect. | 7 | 23 |
| 6 | 162.37 | temperature | 20.0 | 720 | > th | dose independent | rect. | 7 | 14 |
| 7 | 162.57 | temperature | 20.0 | 720 | > th | dose independent | rect. | 8 | 11 |
| 10 | 162.72 | humidity | 90.0 | 270 | > th | dose independent | rect. | 1 | 19 |
| 11 | 162.73 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 21 | 12 |
| 19 | 163.06 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 23 | 163.17 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 24 | 163.20 | humidity | 90.0 | 270 | > th | dose independent | rect. | 1 | 22 |
| 25 | 163.21 | humidity | 90.0 | 270 | < th | dose independent | rect. | 16 | 23 |
| 29 | 163.33 | temperature | 20.0 | 270 | < th | dose independent | rect. | 12 | 6 |
| 30 | 163.34 | humidity | 90.0 | 270 | > th | dose independent | rect. | 22 | 22 |
| 46 | 163.77 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 11 | 2 |
| 47 | 163.80 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 24 | 9 |
| 52 | 163.83 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 18 | 15 |
| 54 | 163.85 | humidity | 90.0 | 270 | < th | dose independent | rect. | 22 | 23 |
| 55 | 163.88 | temperature | 20.0 | 720 | < th | dose independent | rect. | 8 | 13 |
| 62 | 163.94 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 4 | 5 |
| 66 | 164.03 | humidity | 90.0 | 90 | > th | dose independent | rect. | 9 | 1 |
| 68 | 164.03 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 9 | 1 |
| 71 | 164.08 | humidity | 90.0 | 270 | < th | dose independent | rect. | 20 | 23 |
| 75 | 164.13 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 12 | 5 |
| 80 | 164.22 | temperature | 20.0 | 720 | < th | dose independent | rect. | 8 | 11 |
| 82 | 164.23 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 7 | 4 |
| 87 | 164.26 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 90 | 164.26 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 10 | 1 |
| 93 | 164.32 | temperature | 20.0 | 720 | > th | dose independent | sin | 22 | NA |
| 94 | 164.33 | humidity | 90.0 | 270 | < th | dose independent | no | NA | NA |
| 100 | 164.38 | temperature | 20.0 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 109 | 164.52 | humidity | 90.0 | 270 | < th | dose independent | rect. | 5 | 23 |
| 110 | 164.52 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 114 | 164.55 | temperature | 20.0 | 720 | < th | dose independent | sin | 22 | NA |
| 128 | 164.68 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 22 | 21 |
| 131 | 164.71 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 141 | 164.80 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 144 | 164.80 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 9 | 1 |
| 158 | 164.89 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 160 | 164.90 | wind | 9.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 163 | 164.91 | temperature | 20.0 | 720 | < th | dose independent | rect. | 9 | 8 |
| 164 | 164.92 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 10 | 1 |
| 165 | 164.92 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 10 | 1 |
| 166 | 164.94 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 170 | 164.98 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 6 | 7 |
| 181 | 165.03 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 18 | 3 |
| 188 | 165.07 | humidity | 50.0 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 208 | 165.07 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 9 | 1 |
| 209 | 165.07 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 250 | 165.17 | humidity | 90.0 | 270 | > th | dose independent | rect. | 7 | 23 |
| 267 | 165.28 | wind | 7.0 | 4320 | > th | dose independent | rect. | 7 | 3 |
| 282 | 165.34 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 6 | 5 |
| 296 | 165.41 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 6 | 10 |
| 298 | 165.41 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 6 | 8 |
| 316 | 165.44 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 1 | 17 |
| 355 | 165.60 | humidity | 90.0 | 270 | > th | dose independent | rect. | 13 | 23 |
| 357 | 165.61 | temperature | 20.0 | 90 | > th | dose independent | rect. | 9 | 18 |
| 359 | 165.62 | humidity | 90.0 | 270 | > th | dose independent | no | NA | NA |
| 372 | 165.69 | humidity | 90.0 | 270 | > th | dose independent | rect. | 16 | 23 |
| 382 | 165.72 | wind | 7.0 | 4320 | < th | dose independent | rect. | 7 | 3 |
| 398 | 165.77 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 18 | 6 |
| 410 | 165.80 | humidity | 50.0 | 14400 | < th | dose dependent | rect. | 11 | 1 |
| 462 | 166.01 | humidity | 90.0 | 1440 | < th | dose independent | rect. | 10 | 1 |
| 476 | 166.06 | humidity | 90.0 | 270 | < th | dose independent | rect. | 22 | 15 |
| 478 | 166.06 | humidity | 90.0 | 270 | > th | dose independent | rect. | 10 | 23 |
| 510 | 166.20 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 15 | 6 |
| 512 | 166.21 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 18 | 3 |
| 585 | 166.41 | humidity | 80.0 | 1440 | > th | dose dependent | rect. | 10 | 1 |
| 656 | 166.63 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 682 | 166.67 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 13 | 1 |
| 704 | 166.76 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 14 | 22 |
| 731 | 166.84 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 797 | 167.01 | humidity | 80.0 | 270 | > th | dose dependent | no | NA | NA |
| 833 | 167.11 | temperature | 15.0 | 4320 | > th | dose independent | sin | 0 | NA |
| 837 | 167.12 | temperature | 15.0 | 4320 | < th | dose independent | sin | 0 | NA |
| 850 | 167.16 | temperature | 20.0 | 270 | > th | dose independent | rect. | 2 | 19 |
| 867 | 167.19 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 9 | 23 |
| 876 | 167.22 | humidity | 90.0 | 270 | < th | dose independent | sin | 7 | NA |
| 907 | 167.28 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 9 | 2 |
| 918 | 167.31 | temperature | 20.0 | 4320 | < th | dose dependent | rect. | 15 | 1 |
| 920 | 167.31 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 11 | 8 |
| 942 | 167.37 | humidity | 90.0 | 270 | > th | dose independent | sin | 5 | NA |
| 950 | 167.39 | temperature | 15.0 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 989 | 167.45 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 20 | 16 |