Os03g0656500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to K-exchanger-like protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0656500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to K-exchanger-like protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 58.8 | 0.36 | 11.7 | 0.791 | 1.47 | 1.15 | -0.502 | 0.245 | 0.143 | 9.84 | 28.32 | 89 | -- | -- |
| 58.88 | 0.357 | 11.7 | 0.835 | 1.47 | 1.14 | -0.554 | -- | 0.154 | 9.84 | 28.41 | 90 | -- | -- |
| 59.69 | 0.36 | 11.7 | 0.742 | 1.47 | 1.13 | -- | 0.441 | 0.134 | 9.78 | 28.12 | 90 | -- | -- |
| 60.02 | 0.361 | 11.7 | 0.819 | 1.47 | 1.14 | -- | -- | 0.154 | 9.82 | 28.34 | 90 | -- | -- |
| 137.64 | 0.546 | 11.7 | 0.942 | -- | 1.91 | -- | -0.437 | 0.283 | -- | 30.64 | 613 | -- | -- |
| 76.86 | 0.411 | 11.7 | 0.542 | 1.42 | -- | -0.478 | -- | -0.0894 | 8.92 | -- | -- | -- | -- |
| 77.63 | 0.413 | 11.7 | 0.525 | 1.42 | -- | -- | -- | -0.0899 | 8.89 | -- | -- | -- | -- |
| 137.55 | 0.546 | 11.7 | 1 | -- | 1.84 | -- | -- | 0.26 | -- | 30.46 | 642 | -- | -- |
| 75.46 | 0.405 | 11.7 | -- | 1.45 | 0.781 | -- | -- | -0.00055 | 9.49 | 28.2 | 90 | -- | -- |
| 193.1 | 0.649 | 11.7 | 0.525 | -- | -- | -- | -- | -0.0799 | -- | -- | -- | -- | -- |
| 84.89 | 0.431 | 11.7 | -- | 1.42 | -- | -- | -- | -0.148 | 8.86 | -- | -- | -- | -- |
| 161.27 | 0.591 | 11.7 | -- | -- | 1.48 | -- | -- | 0.0741 | -- | 31.4 | 630 | -- | -- |
| 200.37 | 0.661 | 11.8 | -- | -- | -- | -- | -- | -0.138 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 55.06 | temperature | 15 | 90 | > th | dose dependent | rect. | 7 | 21 |
| 2 | 55.22 | temperature | 15 | 10 | > th | dose dependent | rect. | 7 | 22 |
| 25 | 57.66 | temperature | 30 | 90 | < th | dose dependent | rect. | 16 | 15 |
| 35 | 57.97 | temperature | 30 | 90 | < th | dose dependent | rect. | 16 | 19 |
| 40 | 58.12 | temperature | 30 | 90 | < th | dose dependent | rect. | 16 | 17 |
| 44 | 58.27 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 22 |
| 56 | 58.50 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 22 |
| 60 | 58.67 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 22 |
| 61 | 58.67 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 109 | 59.32 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 9 |
| 126 | 59.55 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 132 | 59.64 | temperature | 10 | 270 | > th | dose dependent | sin | 10 | NA |
| 148 | 59.85 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 169 | 59.97 | temperature | 20 | 90 | > th | dose independent | rect. | 7 | 21 |
| 188 | 60.05 | temperature | 30 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 215 | 60.26 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 288 | 60.79 | temperature | 20 | 10 | > th | dose independent | rect. | 7 | 22 |
| 341 | 61.06 | temperature | 30 | 30 | < th | dose dependent | rect. | 23 | 23 |
| 344 | 61.08 | temperature | 30 | 270 | < th | dose dependent | sin | 10 | NA |
| 370 | 61.18 | temperature | 15 | 270 | > th | dose dependent | rect. | 20 | 14 |
| 376 | 61.20 | temperature | 15 | 10 | > th | dose dependent | rect. | 20 | 9 |
| 379 | 61.22 | temperature | 30 | 90 | < th | dose dependent | sin | 8 | NA |
| 385 | 61.23 | temperature | 20 | 90 | > th | dose independent | rect. | 20 | 8 |
| 494 | 61.58 | temperature | 10 | 30 | > th | dose dependent | no | NA | NA |
| 778 | 62.40 | temperature | 20 | 10 | > th | dose independent | rect. | 20 | 9 |
| 871 | 62.66 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 4 |