Os03g0654600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0654600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 96.71 | 0.462 | 2.98 | -0.0019 | 0.129 | 1.28 | 0.216 | -2.87 | 0.0368 | 17.1 | 49.89 | 19 | -- | -- |
| 97.9 | 0.464 | 2.97 | 0.039 | 0.14 | 0.573 | 0.258 | -- | 0.034 | 17.6 | 49.89 | 19 | -- | -- |
| 96.81 | 0.458 | 2.98 | -0.00252 | 0.13 | 1.3 | -- | -2.87 | 0.0381 | 16.6 | 49.89 | 18 | -- | -- |
| 98.03 | 0.464 | 2.97 | 0.038 | 0.143 | 0.58 | -- | -- | 0.0355 | 17 | 49.86 | 18 | -- | -- |
| 97.69 | 0.46 | 2.98 | -0.0132 | -- | 1.38 | -- | -2.96 | 0.0358 | -- | 49.81 | 18 | -- | -- |
| 100.33 | 0.47 | 2.97 | 0.0774 | 0.173 | -- | 0.312 | -- | 0.0261 | 17 | -- | -- | -- | -- |
| 100.55 | 0.47 | 2.97 | 0.0782 | 0.175 | -- | -- | -- | 0.0277 | 16.6 | -- | -- | -- | -- |
| 99.08 | 0.466 | 2.97 | 0.0291 | -- | 0.634 | -- | -- | 0.0326 | -- | 49.86 | 18 | -- | -- |
| 98.06 | 0.464 | 2.97 | -- | 0.142 | 0.589 | -- | -- | 0.0315 | 17 | 49.75 | 18 | -- | -- |
| 102.18 | 0.472 | 2.97 | 0.0715 | -- | -- | -- | -- | 0.0231 | -- | -- | -- | -- | -- |
| 100.72 | 0.469 | 2.97 | -- | 0.173 | -- | -- | -- | 0.019 | 16.7 | -- | -- | -- | -- |
| 99.1 | 0.465 | 2.97 | -- | -- | 0.641 | -- | -- | 0.0296 | -- | 49.86 | 18 | -- | -- |
| 102.31 | 0.472 | 2.97 | -- | -- | -- | -- | -- | 0.0152 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 88.13 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 13 | 3 |
| 2 | 88.17 | radiation | 1.0 | 90 | < th | dose independent | rect. | 13 | 3 |
| 6 | 88.95 | humidity | 50.0 | 10 | < th | dose independent | rect. | 12 | 4 |
| 8 | 88.96 | humidity | 50.0 | 10 | < th | dose dependent | rect. | 13 | 3 |
| 11 | 89.00 | radiation | 20.0 | 10 | > th | dose dependent | rect. | 16 | 1 |
| 42 | 89.08 | humidity | 50.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 43 | 89.08 | humidity | 50.0 | 10 | < th | dose dependent | rect. | 15 | 1 |
| 153 | 89.36 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 15 | 1 |
| 154 | 89.41 | radiation | 1.0 | 90 | < th | dose independent | rect. | 14 | 1 |
| 155 | 89.41 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 176 | 89.69 | radiation | 1.0 | 10 | < th | dose independent | rect. | 13 | 3 |
| 180 | 89.78 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 13 | 3 |
| 225 | 90.27 | humidity | 80.0 | 270 | > th | dose dependent | rect. | 12 | 1 |
| 226 | 90.29 | humidity | 80.0 | 270 | > th | dose independent | rect. | 12 | 1 |
| 239 | 90.39 | radiation | 1.0 | 270 | < th | dose independent | rect. | 12 | 1 |
| 241 | 90.39 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 12 | 1 |
| 245 | 90.44 | radiation | 1.0 | 10 | < th | dose independent | rect. | 6 | 10 |
| 247 | 90.45 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 6 | 10 |
| 319 | 91.09 | radiation | 20.0 | 10 | > th | dose independent | rect. | 15 | 1 |
| 346 | 91.32 | radiation | 1.0 | 10 | < th | dose independent | rect. | 15 | 1 |
| 388 | 91.87 | humidity | 50.0 | 10 | < th | dose independent | sin | 6 | NA |
| 423 | 92.49 | temperature | 30.0 | 10 | > th | dose independent | rect. | 15 | 1 |
| 431 | 92.71 | wind | 3.0 | 30 | > th | dose independent | rect. | 15 | 1 |
| 495 | 93.40 | temperature | 25.0 | 90 | < th | dose independent | rect. | 13 | 3 |
| 496 | 93.41 | temperature | 25.0 | 90 | < th | dose independent | rect. | 14 | 1 |
| 539 | 93.75 | humidity | 80.0 | 90 | > th | dose independent | rect. | 15 | 1 |
| 560 | 93.98 | wind | 1.0 | 10 | > th | dose dependent | rect. | 15 | 1 |
| 581 | 94.21 | temperature | 25.0 | 270 | < th | dose independent | rect. | 11 | 5 |
| 586 | 94.24 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 15 | 1 |
| 588 | 94.24 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 14 | 2 |
| 593 | 94.27 | radiation | 40.0 | 30 | < th | dose independent | rect. | 15 | 1 |
| 596 | 94.28 | humidity | 80.0 | 10 | > th | dose independent | rect. | 14 | 2 |
| 603 | 94.34 | wind | 9.0 | 30 | < th | dose independent | rect. | 15 | 1 |
| 604 | 94.34 | humidity | 90.0 | 30 | < th | dose independent | rect. | 15 | 1 |
| 609 | 94.40 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 16 | 1 |
| 671 | 94.55 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 15 | 1 |
| 724 | 94.68 | temperature | 10.0 | 30 | > th | dose independent | rect. | 15 | 1 |
| 726 | 94.68 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 15 | 1 |
| 728 | 94.68 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 15 | 1 |
| 729 | 94.68 | temperature | 10.0 | 30 | > th | dose independent | rect. | 16 | 23 |
| 730 | 94.68 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 15 | 1 |
| 747 | 94.76 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 16 | 23 |
| 748 | 94.76 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 16 | 23 |
| 814 | 94.96 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 16 | 23 |
| 815 | 94.96 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 15 | 1 |
| 818 | 94.97 | humidity | 50.0 | 30 | > th | dose independent | rect. | 16 | 23 |
| 821 | 94.99 | wind | 7.0 | 90 | > th | dose independent | rect. | 14 | 1 |
| 840 | 95.00 | humidity | 70.0 | 10 | < th | dose dependent | rect. | 15 | 1 |
| 843 | 95.02 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 847 | 95.02 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 865 | 95.07 | wind | 9.0 | 30 | < th | dose independent | rect. | 16 | 23 |
| 882 | 95.10 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 16 | 23 |