Os03g0645200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Translation initiation factor eIF-2B delta subunit (eIF-2B GDP-GTP exchange factor).
FiT-DB / Search/ Help/ Sample detail
|
Os03g0645200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Translation initiation factor eIF-2B delta subunit (eIF-2B GDP-GTP exchange factor).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 139.26 | 0.554 | 5.98 | 1.62 | 0.679 | 2.48 | -0.148 | -1.22 | 0.153 | 12.3 | 28.27 | 9 | -- | -- |
| 139.46 | 0.55 | 6 | 1.41 | 0.602 | 2.56 | 0.25 | -- | 0.127 | 12.5 | 27.31 | 50 | -- | -- |
| 139.1 | 0.554 | 5.99 | 1.58 | 0.684 | 2.48 | -- | -1.08 | 0.138 | 12.3 | 28.27 | 9 | -- | -- |
| 139.71 | 0.551 | 6 | 1.42 | 0.596 | 2.54 | -- | -- | 0.128 | 12.4 | 27.24 | 50 | -- | -- |
| 155.17 | 0.58 | 5.95 | 1.61 | -- | 2.18 | -- | -1.27 | 0.17 | -- | 26.41 | 77 | -- | -- |
| 229.9 | 0.711 | 6.13 | 0.804 | 0.357 | -- | -0.654 | -- | -0.433 | 5.94 | -- | -- | -- | -- |
| 230.95 | 0.712 | 6.13 | 0.799 | 0.354 | -- | -- | -- | -0.431 | 6.04 | -- | -- | -- | -- |
| 154.93 | 0.58 | 6.03 | 1.32 | -- | 2.16 | -- | -- | 0.0363 | -- | 26.21 | 79 | -- | -- |
| 187.08 | 0.641 | 6.06 | -- | 0.474 | 1.93 | -- | -- | -0.145 | 11 | 26.68 | 36 | -- | -- |
| 237.43 | 0.72 | 6.14 | 0.809 | -- | -- | -- | -- | -0.423 | -- | -- | -- | -- | -- |
| 247.78 | 0.736 | 6.15 | -- | 0.366 | -- | -- | -- | -0.52 | 5.93 | -- | -- | -- | -- |
| 196.99 | 0.654 | 6.08 | -- | -- | 1.73 | -- | -- | -0.184 | -- | 26.24 | 59 | -- | -- |
| 254.71 | 0.745 | 6.16 | -- | -- | -- | -- | -- | -0.512 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 139.24 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 2 | 140.10 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 4 | 141.72 | temperature | 30 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 5 | 141.78 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 8 | 142.19 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 9 | 142.28 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 10 | 142.29 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 15 | 143.84 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 16 | 144.05 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 21 | 144.53 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 23 | 144.81 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 27 | 145.66 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 32 | 146.14 | temperature | 25 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 51 | 146.87 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 20 |
| 53 | 146.94 | temperature | 25 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 91 | 149.03 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 21 |
| 98 | 149.22 | temperature | 30 | 720 | < th | dose dependent | rect. | 9 | 14 |
| 112 | 149.61 | temperature | 15 | 720 | > th | dose dependent | rect. | 9 | 17 |
| 123 | 150.01 | temperature | 15 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 140 | 150.69 | temperature | 10 | 720 | > th | dose dependent | sin | 19 | NA |
| 145 | 150.80 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 154 | 150.90 | temperature | 30 | 720 | < th | dose dependent | sin | 20 | NA |
| 180 | 151.28 | temperature | 25 | 10 | < th | dose dependent | rect. | 5 | 19 |
| 258 | 152.61 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 18 |
| 423 | 155.16 | temperature | 30 | 10 | < th | dose dependent | rect. | 14 | 19 |
| 436 | 155.32 | temperature | 25 | 720 | < th | dose independent | rect. | 8 | 15 |
| 479 | 155.90 | temperature | 30 | 270 | < th | dose dependent | rect. | 13 | 17 |
| 554 | 156.75 | temperature | 20 | 720 | > th | dose dependent | rect. | 14 | 8 |
| 561 | 156.82 | temperature | 20 | 720 | > th | dose dependent | rect. | 14 | 10 |
| 618 | 157.45 | temperature | 30 | 720 | < th | dose dependent | rect. | 13 | 8 |
| 653 | 157.73 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 699 | 158.06 | temperature | 25 | 720 | > th | dose independent | rect. | 7 | 16 |
| 747 | 158.56 | temperature | 15 | 90 | > th | dose dependent | rect. | 9 | 23 |
| 773 | 158.74 | temperature | 25 | 720 | < th | dose independent | sin | 20 | NA |
| 818 | 159.04 | temperature | 25 | 720 | < th | dose independent | rect. | 5 | 18 |
| 836 | 159.18 | temperature | 20 | 720 | > th | dose dependent | no | NA | NA |
| 864 | 159.40 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 891 | 159.54 | temperature | 25 | 720 | > th | dose independent | sin | 20 | NA |
| 931 | 159.75 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 23 |