Os03g0636700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : IQ calmodulin-binding region domain containing protein.
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Os03g0636700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : IQ calmodulin-binding region domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 175.31 | 0.622 | 4.37 | 0.52 | 0.561 | 1.68 | 1.58 | 0.162 | -0.157 | 7.88 | 24.71 | 525 | -- | -- |
| 175.33 | 0.617 | 4.37 | 0.545 | 0.557 | 1.66 | 1.62 | -- | -0.148 | 7.89 | 24.82 | 518 | -- | -- |
| 181.34 | 0.627 | 4.39 | 0.413 | 0.582 | 1.82 | -- | 1.11 | -0.209 | 7.55 | 23.88 | 562 | -- | -- |
| 182.95 | 0.63 | 4.37 | 0.586 | 0.557 | 1.65 | -- | -- | -0.15 | 7.95 | 24.9 | 510 | -- | -- |
| 194.14 | 0.649 | 4.38 | 0.504 | -- | 1.91 | -- | 0.925 | -0.0897 | -- | 26.56 | 560 | -- | -- |
| 215.89 | 0.689 | 4.44 | 0.105 | 0.76 | -- | 1.54 | -- | -0.484 | 7.93 | -- | -- | -- | -- |
| 222.9 | 0.699 | 4.44 | 0.147 | 0.759 | -- | -- | -- | -0.486 | 7.92 | -- | -- | -- | -- |
| 194.77 | 0.65 | 4.38 | 0.627 | -- | 1.92 | -- | -- | -0.147 | -- | 31.4 | 574 | -- | -- |
| 190.9 | 0.644 | 4.39 | -- | 0.579 | 1.43 | -- | -- | -0.248 | 8.01 | 25.1 | 478 | -- | -- |
| 254.25 | 0.745 | 4.46 | 0.155 | -- | -- | -- | -- | -0.475 | -- | -- | -- | -- | -- |
| 223.47 | 0.699 | 4.44 | -- | 0.76 | -- | -- | -- | -0.502 | 7.91 | -- | -- | -- | -- |
| 204.12 | 0.665 | 4.41 | -- | -- | 1.7 | -- | -- | -0.255 | -- | 31.75 | 555 | -- | -- |
| 254.89 | 0.745 | 4.46 | -- | -- | -- | -- | -- | -0.493 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 161.69 | temperature | 15.0 | 270 | > th | dose dependent | sin | 7 | NA |
| 9 | 165.96 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 13 | 167.50 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 19 | 18 |
| 17 | 168.02 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 21 | 16 |
| 19 | 168.16 | temperature | 30.0 | 270 | < th | dose dependent | sin | 6 | NA |
| 30 | 169.46 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 24 | 21 |
| 40 | 170.33 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 24 | 11 |
| 63 | 171.42 | wind | 9.0 | 14400 | > th | dose independent | rect. | 5 | 8 |
| 65 | 171.49 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 17 | 14 |
| 73 | 171.69 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 82 | 171.85 | temperature | 25.0 | 720 | < th | dose dependent | sin | 12 | NA |
| 116 | 172.67 | wind | 9.0 | 14400 | > th | dose independent | rect. | 9 | 4 |
| 118 | 172.67 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 20 | 9 |
| 138 | 172.98 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 11 | 1 |
| 150 | 173.15 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 7 |
| 152 | 173.20 | wind | 9.0 | 14400 | < th | dose independent | rect. | 5 | 8 |
| 155 | 173.25 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 163 | 173.35 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 164 | 173.36 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 6 |
| 197 | 173.85 | wind | 9.0 | 14400 | < th | dose independent | rect. | 9 | 3 |
| 223 | 174.19 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 230 | 174.26 | wind | 9.0 | 14400 | < th | dose independent | rect. | 11 | 1 |
| 245 | 174.45 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 7 |
| 251 | 174.49 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 13 |
| 253 | 174.50 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 21 | 10 |
| 269 | 174.78 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 11 | 21 |
| 309 | 175.11 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 321 | 175.22 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 384 | 175.83 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 402 | 175.98 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 411 | 176.04 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 21 | 19 |
| 415 | 176.06 | temperature | 25.0 | 720 | < th | dose dependent | no | NA | NA |
| 433 | 176.18 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 1 | 15 |
| 445 | 176.33 | radiation | 10.0 | 4320 | < th | dose independent | rect. | 16 | 15 |
| 469 | 176.57 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 490 | 176.72 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 501 | 176.80 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 23 | 17 |
| 508 | 176.85 | radiation | 10.0 | 4320 | < th | dose independent | rect. | 3 | 4 |
| 513 | 176.87 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 522 | 176.92 | radiation | 10.0 | 4320 | < th | dose independent | rect. | 19 | 12 |
| 587 | 177.33 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 600 | 177.43 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 602 | 177.43 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 605 | 177.45 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 618 | 177.50 | radiation | 1.0 | 4320 | > th | dose dependent | rect. | 5 | 1 |
| 636 | 177.57 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 646 | 177.62 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 21 |
| 651 | 177.66 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 17 | 10 |
| 668 | 177.77 | wind | 9.0 | 14400 | > th | dose independent | sin | 5 | NA |
| 675 | 177.79 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 1 | 1 |
| 682 | 177.83 | temperature | 25.0 | 4320 | < th | dose dependent | rect. | 21 | 5 |
| 705 | 177.94 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 17 | 5 |
| 718 | 177.99 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 21 | 2 |
| 722 | 177.99 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 846 | 178.39 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 873 | 178.47 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 20 | 3 |
| 879 | 178.48 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 5 |
| 892 | 178.50 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 21 | 5 |
| 897 | 178.52 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 20 | 3 |
| 899 | 178.52 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 20 | 3 |
| 969 | 178.71 | humidity | 50.0 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 993 | 178.76 | wind | 9.0 | 14400 | < th | dose independent | sin | 5 | NA |
| 998 | 178.77 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 4 | 1 |