BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0636700 Os03g0636700|Os03g0636700
(447 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G14750.1 | chr4:8470449-8471903 FORWARD LENGTH=388 106 3e-23
AT4G29150.1 | chr4:14378770-14380340 FORWARD LENGTH=400 75 6e-14
AT1G01110.2 | chr1:52239-54494 FORWARD LENGTH=528 72 5e-13
AT4G00820.1 | chr4:349300-351307 FORWARD LENGTH=535 72 7e-13
AT3G22190.1 | chr3:7831280-7833512 REVERSE LENGTH=423 70 3e-12
AT3G16490.1 | chr3:5603962-5605489 REVERSE LENGTH=390 70 3e-12
AT5G03040.1 | chr5:710380-712406 REVERSE LENGTH=462 69 7e-12
AT5G62070.1 | chr5:24930057-24932451 REVERSE LENGTH=404 67 2e-11
AT2G26180.1 | chr2:11143433-11144982 REVERSE LENGTH=417 67 2e-11
AT5G07240.1 | chr5:2272028-2274051 FORWARD LENGTH=402 67 3e-11
AT3G49260.3 | chr3:18262755-18265859 FORWARD LENGTH=473 65 8e-11
AT5G13460.1 | chr5:4316323-4318247 FORWARD LENGTH=444 64 1e-10
AT3G52290.1 | chr3:19394441-19396196 FORWARD LENGTH=431 64 1e-10
AT1G74690.1 | chr1:28061498-28063924 REVERSE LENGTH=588 62 4e-10
AT4G10640.1 | chr4:6571999-6574312 FORWARD LENGTH=424 62 5e-10
AT1G51960.1 | chr1:19310355-19311683 FORWARD LENGTH=352 62 7e-10
AT1G18840.1 | chr1:6501068-6503435 REVERSE LENGTH=573 61 1e-09
AT3G59690.1 | chr3:22049572-22051479 FORWARD LENGTH=518 61 1e-09
AT4G23060.1 | chr4:12087283-12090408 FORWARD LENGTH=485 60 2e-09
AT2G43680.1 | chr2:18109302-18111587 FORWARD LENGTH=670 60 2e-09
AT1G72670.1 | chr1:27356898-27358657 REVERSE LENGTH=415 60 3e-09
AT1G14380.1 | chr1:4918279-4920761 REVERSE LENGTH=665 59 7e-09
AT1G17480.1 | chr1:6006675-6008132 REVERSE LENGTH=372 58 1e-08
AT1G19870.1 | chr1:6895400-6898539 REVERSE LENGTH=795 56 3e-08
AT3G49380.1 | chr3:18311909-18313490 REVERSE LENGTH=353 54 1e-07
AT3G51380.1 | chr3:19074036-19074426 REVERSE LENGTH=104 54 2e-07
AT5G03960.1 | chr5:1068333-1069683 REVERSE LENGTH=404 52 9e-07
>AT4G14750.1 | chr4:8470449-8471903 FORWARD LENGTH=388
Length = 387
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/328 (30%), Positives = 129/328 (39%), Gaps = 97/328 (29%)
Query: 116 KIQCVFRSYLARKALCALRGLVKLQALVRGHLVRRQASNTLRCMQXXXXXXXXXXXXXXX 175
KIQ +RS+LARKAL AL+GLVKLQALVRGHLVR+QA+ TLRCMQ
Sbjct: 110 KIQACYRSHLARKALRALKGLVKLQALVRGHLVRKQATATLRCMQALITLQAKAREQRIR 169
Query: 176 XXDDDKEKPLLHTPRMMPTRRSPHHPRFRHXXXXXEAEENVKIVEVDTXXXXXXXXXEAH 235
D P R S H R + E EEN+KIVE+D
Sbjct: 170 MIGGDSTNP----------RTSIHKTRINN--FYHENEENIKIVEMDI------------ 205
Query: 236 CTPXXXXXXXXCYATPLCRTPSKVELYQKVSPTPSALTDASARTYSGRYDD-FSFSTARN 294
+ ++Y SP PSALT+ S R YS ++D SF+TA++
Sbjct: 206 ----------------------QSKMY---SPAPSALTEMSPRAYSSHFEDCNSFNTAQS 240
Query: 295 SP-----WHHHHASDAPCKXXXXXXXXXXXXLFFPNYMANTEXXXXXXXXXXXXXXXXXX 349
SP + ++ D FPNYMANT+
Sbjct: 241 SPQCFSRFKEYYNGDTLSSYDYP---------LFPNYMANTQ----------SSKAKARS 281
Query: 350 XXXXXXXXXXXXXXQASARRRASLEAQAASAPPNKCGAAMMARVQRCPSQASAPAS---- 405
Q S RRR+S+EA P G R+QR SQ + +
Sbjct: 282 QSAPKQRPPEIYEKQMSGRRRSSMEA------PRNNGVPRAVRMQRSSSQLGSNTAKESQ 335
Query: 406 -------CPWG------SRLPDHDSECG 420
PW S + +SECG
Sbjct: 336 QHHHHQYYPWMAIKLDRSNISLMESECG 363
>AT4G29150.1 | chr4:14378770-14380340 FORWARD LENGTH=400
Length = 399
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/109 (44%), Positives = 56/109 (51%), Gaps = 13/109 (11%)
Query: 116 KIQCVFRSYLARKALCALRGLVKLQALVRGHLVRRQASNTLRCMQXXXXXXXXXXXXXXX 175
+IQC FR YLARKAL ALRG+VK+QALVRG LVR QA+ TLR M+
Sbjct: 136 QIQCAFRGYLARKALRALRGVVKIQALVRGFLVRNQAAATLRSMEALVRAQKTVKI---- 191
Query: 176 XXDDDKEKPLLHTPRMMPTRRSPHHPRFRHX-XXXXEAEENVKIVEVDT 223
++ L P R+S RF EE KIVEVDT
Sbjct: 192 ------QRALRRNGNAAPARKSTE--RFSGSLENRNNGEETAKIVEVDT 232
>AT1G01110.2 | chr1:52239-54494 FORWARD LENGTH=528
Length = 527
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%)
Query: 117 IQCVFRSYLARKALCALRGLVKLQALVRGHLVRRQASNTLRCMQ 160
IQ FR YLAR+AL AL+GLVKLQALVRGH VR+QA TLRCMQ
Sbjct: 127 IQTSFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQ 170
>AT4G00820.1 | chr4:349300-351307 FORWARD LENGTH=535
Length = 534
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 34/44 (77%), Positives = 37/44 (84%)
Query: 117 IQCVFRSYLARKALCALRGLVKLQALVRGHLVRRQASNTLRCMQ 160
IQ FR YLAR+AL AL+GLVKLQALVRGH VR+QA TLRCMQ
Sbjct: 138 IQTGFRGYLARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQ 181
>AT3G22190.1 | chr3:7831280-7833512 REVERSE LENGTH=423
Length = 422
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 39/45 (86%)
Query: 116 KIQCVFRSYLARKALCALRGLVKLQALVRGHLVRRQASNTLRCMQ 160
+IQ +R +LAR+AL AL+GLV+LQALVRGH VR+QA+ TLRCMQ
Sbjct: 93 RIQTAYRGFLARRALRALKGLVRLQALVRGHAVRKQAAVTLRCMQ 137
>AT3G16490.1 | chr3:5603962-5605489 REVERSE LENGTH=390
Length = 389
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/45 (73%), Positives = 39/45 (86%)
Query: 116 KIQCVFRSYLARKALCALRGLVKLQALVRGHLVRRQASNTLRCMQ 160
KIQ VF+ YLARKAL AL+GLVKLQALVRG+LVR++A+ TL MQ
Sbjct: 112 KIQSVFKGYLARKALRALKGLVKLQALVRGYLVRKRAAETLHSMQ 156
>AT5G03040.1 | chr5:710380-712406 REVERSE LENGTH=462
Length = 461
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 38/44 (86%)
Query: 117 IQCVFRSYLARKALCALRGLVKLQALVRGHLVRRQASNTLRCMQ 160
IQ +FR YLAR+AL A+RGLV+L+ L+ G +V+RQA+NTL+CMQ
Sbjct: 121 IQTIFRGYLARRALRAMRGLVRLKLLMEGSVVKRQAANTLKCMQ 164
>AT5G62070.1 | chr5:24930057-24932451 REVERSE LENGTH=404
Length = 403
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/45 (68%), Positives = 37/45 (82%)
Query: 116 KIQCVFRSYLARKALCALRGLVKLQALVRGHLVRRQASNTLRCMQ 160
KIQ FR YLAR+AL AL+ LVKLQALVRGH+VR+Q ++ LR MQ
Sbjct: 122 KIQSAFRGYLARRALRALKALVKLQALVRGHIVRKQTADMLRRMQ 166
>AT2G26180.1 | chr2:11143433-11144982 REVERSE LENGTH=417
Length = 416
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 38/45 (84%)
Query: 116 KIQCVFRSYLARKALCALRGLVKLQALVRGHLVRRQASNTLRCMQ 160
+IQ FR +LAR+AL AL+G+V+LQALVRG VR+QA+ TLRCMQ
Sbjct: 89 RIQTAFRGFLARRALRALKGIVRLQALVRGRQVRKQAAVTLRCMQ 133
>AT5G07240.1 | chr5:2272028-2274051 FORWARD LENGTH=402
Length = 401
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 37/45 (82%)
Query: 116 KIQCVFRSYLARKALCALRGLVKLQALVRGHLVRRQASNTLRCMQ 160
KIQ FR YLAR+AL AL+ LVKLQALV+GH+VR+Q ++ LR MQ
Sbjct: 111 KIQSAFRGYLARRALRALKALVKLQALVKGHIVRKQTADMLRRMQ 155
>AT3G49260.3 | chr3:18262755-18265859 FORWARD LENGTH=473
Length = 472
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 37/44 (84%)
Query: 117 IQCVFRSYLARKALCALRGLVKLQALVRGHLVRRQASNTLRCMQ 160
IQ +R YLAR+AL AL+GLV+LQALVRG+ VR+QA T++CMQ
Sbjct: 126 IQSHYRGYLARRALRALKGLVRLQALVRGNHVRKQAQMTMKCMQ 169
>AT5G13460.1 | chr5:4316323-4318247 FORWARD LENGTH=444
Length = 443
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 36/45 (80%)
Query: 116 KIQCVFRSYLARKALCALRGLVKLQALVRGHLVRRQASNTLRCMQ 160
+IQ FR +LARKAL AL+G+VKLQA +RG VRRQA TL+C+Q
Sbjct: 116 RIQTAFRGHLARKALRALKGIVKLQAYIRGRAVRRQAMTTLKCLQ 160
>AT3G52290.1 | chr3:19394441-19396196 FORWARD LENGTH=431
Length = 430
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 38/45 (84%)
Query: 116 KIQCVFRSYLARKALCALRGLVKLQALVRGHLVRRQASNTLRCMQ 160
KIQ FR Y+AR+AL ALRGLV+L++LV+G VRRQA++TL+ MQ
Sbjct: 113 KIQTAFRGYMARRALRALRGLVRLKSLVQGKCVRRQATSTLQSMQ 157
>AT1G74690.1 | chr1:28061498-28063924 REVERSE LENGTH=588
Length = 587
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 33/40 (82%)
Query: 117 IQCVFRSYLARKALCALRGLVKLQALVRGHLVRRQASNTL 156
+Q FR YLAR+A AL+G+++LQAL+RGHLVRRQA TL
Sbjct: 119 VQAAFRGYLARRAFWALKGIIRLQALIRGHLVRRQAVATL 158
>AT4G10640.1 | chr4:6571999-6574312 FORWARD LENGTH=424
Length = 423
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/44 (65%), Positives = 36/44 (81%)
Query: 117 IQCVFRSYLARKALCALRGLVKLQALVRGHLVRRQASNTLRCMQ 160
IQ FR YL+R+AL AL+G+VKLQALVRG+ VR QA TLRC++
Sbjct: 106 IQTAFRGYLSRRALRALKGIVKLQALVRGNNVRNQAKLTLRCIK 149
>AT1G51960.1 | chr1:19310355-19311683 FORWARD LENGTH=352
Length = 351
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 38/45 (84%)
Query: 116 KIQCVFRSYLARKALCALRGLVKLQALVRGHLVRRQASNTLRCMQ 160
KIQ VFR LARKAL AL+G+VKLQALVRG+LVR++A+ L+ +Q
Sbjct: 105 KIQKVFRGSLARKALRALKGIVKLQALVRGYLVRKRAAAMLQSIQ 149
>AT1G18840.1 | chr1:6501068-6503435 REVERSE LENGTH=573
Length = 572
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 24/43 (55%), Positives = 35/43 (81%)
Query: 117 IQCVFRSYLARKALCALRGLVKLQALVRGHLVRRQASNTLRCM 159
+Q +R YLAR+A L+G+++LQAL+RGH+VRRQA +TL C+
Sbjct: 115 VQAAYRGYLARRAFKILKGIIRLQALIRGHMVRRQAVSTLCCV 157
>AT3G59690.1 | chr3:22049572-22051479 FORWARD LENGTH=518
Length = 517
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 34/45 (75%)
Query: 116 KIQCVFRSYLARKALCALRGLVKLQALVRGHLVRRQASNTLRCMQ 160
KIQ FR Y+AR++ AL+GLV+LQ +VRGH V+RQ N ++ MQ
Sbjct: 174 KIQAAFRGYMARRSFRALKGLVRLQGVVRGHSVKRQTMNAMKYMQ 218
>AT4G23060.1 | chr4:12087283-12090408 FORWARD LENGTH=485
Length = 484
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 36/45 (80%)
Query: 116 KIQCVFRSYLARKALCALRGLVKLQALVRGHLVRRQASNTLRCMQ 160
KIQ +FR YLA++AL AL+GLV+LQA+VRGH+ R++ S LR M
Sbjct: 172 KIQSIFRGYLAKRALRALKGLVRLQAIVRGHIERKRMSVHLRRMH 216
>AT2G43680.1 | chr2:18109302-18111587 FORWARD LENGTH=670
Length = 669
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 34/45 (75%)
Query: 116 KIQCVFRSYLARKALCALRGLVKLQALVRGHLVRRQASNTLRCMQ 160
KIQ FR Y+ARK+ AL+GLV+LQ +VRG+ V+RQ N ++ MQ
Sbjct: 328 KIQGAFRGYMARKSFRALKGLVRLQGVVRGYSVKRQTINAMKYMQ 372
>AT1G72670.1 | chr1:27356898-27358657 REVERSE LENGTH=415
Length = 414
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 36/45 (80%)
Query: 116 KIQCVFRSYLARKALCALRGLVKLQALVRGHLVRRQASNTLRCMQ 160
+IQ FR++LAR+AL AL+ +V++QA+ RG VR+QA TLRCMQ
Sbjct: 98 RIQAAFRAFLARQALRALKAVVRIQAIFRGRQVRKQADVTLRCMQ 142
>AT1G14380.1 | chr1:4918279-4920761 REVERSE LENGTH=665
Length = 664
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 34/44 (77%)
Query: 116 KIQCVFRSYLARKALCALRGLVKLQALVRGHLVRRQASNTLRCM 159
K+Q FR++ AR+A L+G+++LQA++RGHLVRRQA T C+
Sbjct: 99 KVQATFRAHQARRAFRTLKGIIRLQAVIRGHLVRRQAIATYSCI 142
>AT1G17480.1 | chr1:6006675-6008132 REVERSE LENGTH=372
Length = 371
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 36/45 (80%)
Query: 116 KIQCVFRSYLARKALCALRGLVKLQALVRGHLVRRQASNTLRCMQ 160
+IQ FR++LAR+A AL+ +V++QA+ RG VR+QA+ TLRCMQ
Sbjct: 99 RIQAAFRAFLARQAFRALKAVVRIQAIFRGRQVRKQAAVTLRCMQ 143
>AT1G19870.1 | chr1:6895400-6898539 REVERSE LENGTH=795
Length = 794
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 31/44 (70%)
Query: 117 IQCVFRSYLARKALCALRGLVKLQALVRGHLVRRQASNTLRCMQ 160
IQ R +LAR+ L + ++KLQA VRGHLVR QA +LRC+Q
Sbjct: 221 IQAAVRGFLARRELLRSKKVIKLQAAVRGHLVRSQAMGSLRCVQ 264
>AT3G49380.1 | chr3:18311909-18313490 REVERSE LENGTH=353
Length = 352
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 34/44 (77%)
Query: 117 IQCVFRSYLARKALCALRGLVKLQALVRGHLVRRQASNTLRCMQ 160
IQ FR LAR A+ AL+G+VKLQALVRGH VRR+ S TL+ +Q
Sbjct: 116 IQTAFRGCLARTAVRALKGVVKLQALVRGHNVRRRTSITLQRVQ 159
>AT3G51380.1 | chr3:19074036-19074426 REVERSE LENGTH=104
Length = 103
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 32/44 (72%)
Query: 116 KIQCVFRSYLARKALCALRGLVKLQALVRGHLVRRQASNTLRCM 159
KIQ FR +LAR+A AL+ LVKLQA+ RG LVRRQA L CM
Sbjct: 42 KIQAFFRGHLARRAFKALKSLVKLQAVARGVLVRRQARIALHCM 85
>AT5G03960.1 | chr5:1068333-1069683 REVERSE LENGTH=404
Length = 403
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 32/42 (76%)
Query: 116 KIQCVFRSYLARKALCALRGLVKLQALVRGHLVRRQASNTLR 157
KIQ FR+ LARKAL AL+ LV+LQA+VRG VRR+ S L+
Sbjct: 112 KIQSAFRASLARKALRALKALVRLQAIVRGRAVRRKVSALLK 153
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.130 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,538,876
Number of extensions: 200267
Number of successful extensions: 512
Number of sequences better than 1.0e-05: 27
Number of HSP's gapped: 509
Number of HSP's successfully gapped: 27
Length of query: 447
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 345
Effective length of database: 8,310,137
Effective search space: 2866997265
Effective search space used: 2866997265
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)