Os03g0635100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Heterotrimeric G protein gamma subunit 1.
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Os03g0635100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Heterotrimeric G protein gamma subunit 1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 81.44 | 0.424 | 7.12 | -0.108 | 1.86 | -1.27 | -1.36 | 2.49 | -0.237 | 0.575 | 0.17 | 314 | -- | -- |
| 84.86 | 0.429 | 7.12 | 0.0502 | 2.23 | -1.58 | 1.22 | -- | -0.215 | 1.08 | 0.2199 | 351 | -- | -- |
| 81.33 | 0.42 | 7.12 | -0.0731 | 2.01 | -1.5 | -- | 1.45 | -0.242 | 1.08 | 0.2423 | 370 | -- | -- |
| 90.8 | 0.444 | 7.1 | -0.0163 | 2.04 | -1.46 | -- | -- | -0.203 | 0.941 | 0.25 | 339 | -- | -- |
| 105.67 | 0.479 | 7.12 | -0.21 | -- | -1.03 | -- | 0.977 | -0.37 | -- | 10.03 | 983 | -- | -- |
| 98.29 | 0.465 | 7.09 | 0.129 | 0.824 | -- | 0.524 | -- | -0.156 | 21.6 | -- | -- | -- | -- |
| 99.21 | 0.466 | 7.09 | 0.111 | 0.826 | -- | -- | -- | -0.156 | 21.4 | -- | -- | -- | -- |
| 107.04 | 0.482 | 7.12 | -0.113 | -- | -1.01 | -- | -- | -0.361 | -- | 10.01 | 1004 | -- | -- |
| 90.78 | 0.444 | 7.11 | -- | 2.05 | -1.46 | -- | -- | -0.217 | 0.9 | 0.2402 | 335 | -- | -- |
| 139.17 | 0.551 | 7.07 | 0.116 | -- | -- | -- | -- | -0.159 | -- | -- | -- | -- | -- |
| 99.54 | 0.467 | 7.09 | -- | 0.827 | -- | -- | -- | -0.168 | 21.4 | -- | -- | -- | -- |
| 107.18 | 0.482 | 7.1 | -- | -- | -0.977 | -- | -- | -0.317 | -- | 10.01 | 1002 | -- | -- |
| 139.52 | 0.551 | 7.07 | -- | -- | -- | -- | -- | -0.171 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 76.32 | radiation | 1 | 720 | < th | dose independent | rect. | 8 | 16 |
| 2 | 76.44 | radiation | 1 | 720 | < th | dose dependent | rect. | 8 | 16 |
| 6 | 77.06 | temperature | 25 | 270 | > th | dose independent | rect. | 13 | 10 |
| 10 | 77.44 | radiation | 1 | 720 | < th | dose dependent | rect. | 8 | 19 |
| 13 | 77.52 | radiation | 1 | 720 | < th | dose dependent | sin | 20 | NA |
| 14 | 77.60 | radiation | 1 | 720 | < th | dose independent | sin | 19 | NA |
| 19 | 77.73 | radiation | 1 | 720 | < th | dose independent | rect. | 8 | 19 |
| 27 | 77.86 | temperature | 25 | 10 | > th | dose independent | sin | 16 | NA |
| 37 | 78.12 | temperature | 25 | 720 | > th | dose independent | rect. | 11 | 8 |
| 38 | 78.13 | temperature | 20 | 720 | > th | dose dependent | rect. | 13 | 5 |
| 40 | 78.14 | temperature | 20 | 10 | > th | dose dependent | rect. | 16 | 10 |
| 51 | 78.34 | temperature | 20 | 720 | > th | dose dependent | rect. | 11 | 8 |
| 63 | 78.58 | temperature | 25 | 720 | > th | dose independent | rect. | 13 | 5 |
| 161 | 79.69 | radiation | 1 | 720 | > th | dose independent | sin | 15 | NA |
| 183 | 79.92 | radiation | 1 | 720 | > th | dose independent | rect. | 13 | 6 |
| 197 | 79.95 | humidity | 80 | 720 | < th | dose independent | rect. | 3 | 15 |
| 209 | 79.99 | humidity | 80 | 720 | < th | dose independent | rect. | 9 | 9 |
| 212 | 80.00 | temperature | 25 | 720 | < th | dose independent | rect. | 12 | 8 |
| 248 | 80.17 | temperature | 25 | 10 | > th | dose independent | rect. | 16 | 9 |
| 264 | 80.26 | temperature | 25 | 720 | < th | dose independent | rect. | 11 | 12 |
| 274 | 80.31 | humidity | 80 | 720 | < th | dose independent | sin | 0 | NA |
| 291 | 80.34 | temperature | 30 | 720 | < th | dose dependent | rect. | 12 | 9 |
| 324 | 80.45 | temperature | 20 | 30 | > th | dose dependent | sin | 15 | NA |
| 332 | 80.47 | temperature | 30 | 720 | < th | dose dependent | rect. | 11 | 12 |
| 402 | 80.85 | temperature | 25 | 10 | < th | dose independent | rect. | 13 | 15 |
| 439 | 81.01 | radiation | 1 | 720 | < th | dose dependent | rect. | 1 | 23 |
| 440 | 81.06 | temperature | 25 | 720 | < th | dose independent | rect. | 15 | 4 |
| 476 | 81.20 | radiation | 1 | 720 | < th | dose dependent | rect. | 1 | 17 |
| 498 | 81.30 | temperature | 25 | 720 | > th | dose independent | sin | 21 | NA |
| 547 | 81.47 | temperature | 10 | 720 | > th | dose dependent | sin | 20 | NA |
| 552 | 81.49 | temperature | 25 | 10 | < th | dose independent | sin | 14 | NA |
| 583 | 81.59 | temperature | 25 | 720 | < th | dose independent | sin | 19 | NA |
| 585 | 81.60 | temperature | 25 | 90 | > th | dose dependent | sin | 12 | NA |
| 622 | 81.73 | radiation | 1 | 720 | > th | dose independent | rect. | 9 | 9 |
| 689 | 81.96 | radiation | 1 | 720 | > th | dose independent | sin | 22 | NA |
| 714 | 82.03 | temperature | 30 | 30 | < th | dose dependent | sin | 14 | NA |
| 721 | 82.05 | temperature | 30 | 270 | < th | dose dependent | rect. | 13 | 14 |
| 727 | 82.08 | radiation | 1 | 720 | < th | dose independent | rect. | 1 | 17 |
| 775 | 82.20 | radiation | 1 | 720 | > th | dose independent | rect. | 7 | 12 |
| 792 | 82.21 | radiation | 1 | 720 | > th | dose independent | rect. | 7 | 23 |
| 812 | 82.28 | temperature | 30 | 720 | < th | dose dependent | sin | 19 | NA |
| 815 | 82.29 | humidity | 80 | 720 | > th | dose independent | rect. | 23 | 18 |
| 851 | 82.39 | temperature | 30 | 270 | < th | dose dependent | sin | 16 | NA |
| 863 | 82.43 | radiation | 1 | 720 | < th | dose dependent | rect. | 21 | 23 |
| 883 | 82.46 | radiation | 1 | 720 | < th | dose dependent | rect. | 15 | 3 |
| 930 | 82.61 | radiation | 1 | 720 | < th | dose independent | rect. | 15 | 3 |
| 963 | 82.66 | humidity | 80 | 720 | > th | dose independent | rect. | 1 | 16 |
| 965 | 82.66 | radiation | 1 | 720 | < th | dose dependent | rect. | 23 | 19 |
| 985 | 82.72 | radiation | 1 | 720 | < th | dose independent | rect. | 1 | 23 |
| 987 | 82.72 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 20 |