Os03g0626600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ubiquitin interacting motif domain containing protein.
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Os03g0626600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ubiquitin interacting motif domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 182.48 | 0.635 | 5.66 | 0.251 | 1.28 | -3.31 | -1 | -2.07 | -0.0521 | 6.35 | 28.04 | 1407 | -- | -- |
| 186.03 | 0.635 | 5.69 | -0.142 | 1.33 | -3.07 | -0.804 | -- | -0.0573 | 6.15 | 30.75 | 1490 | -- | -- |
| 184.76 | 0.633 | 5.66 | 0.218 | 1.29 | -3.31 | -- | -1.95 | -0.0561 | 6.19 | 27.79 | 1417 | -- | -- |
| 185.58 | 0.634 | 5.69 | -0.205 | 1.62 | -3.03 | -- | -- | -0.0739 | 6.24 | 30.79 | 1982 | -- | -- |
| 267.44 | 0.762 | 5.68 | 0.283 | -- | -3.35 | -- | -2.06 | -0.00824 | -- | 28.23 | 1345 | -- | -- |
| 343.75 | 0.869 | 5.55 | 0.823 | 1.4 | -- | -0.82 | -- | 0.574 | 5.98 | -- | -- | -- | -- |
| 345.28 | 0.87 | 5.55 | 0.815 | 1.39 | -- | -- | -- | 0.576 | 5.85 | -- | -- | -- | -- |
| 270.81 | 0.766 | 5.73 | -0.177 | -- | -3.29 | -- | -- | -0.119 | -- | 30 | 1351 | -- | -- |
| 186.69 | 0.636 | 5.68 | -- | 1.6 | -2.92 | -- | -- | -0.0289 | 6.34 | 30.99 | 2022 | -- | -- |
| 446.09 | 0.987 | 5.57 | 0.857 | -- | -- | -- | -- | 0.609 | -- | -- | -- | -- | -- |
| 362.79 | 0.891 | 5.57 | -- | 1.41 | -- | -- | -- | 0.486 | 5.83 | -- | -- | -- | -- |
| 271.55 | 0.767 | 5.72 | -- | -- | -3.19 | -- | -- | -0.0577 | -- | 30.45 | 1349 | -- | -- |
| 465.49 | 1.01 | 5.59 | -- | -- | -- | -- | -- | 0.514 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 173.38 | temperature | 15 | 1440 | > th | dose dependent | rect. | 2 | 7 |
| 4 | 173.55 | temperature | 30 | 1440 | < th | dose dependent | rect. | 2 | 7 |
| 7 | 173.84 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 5 |
| 9 | 173.98 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 5 |
| 39 | 175.49 | temperature | 10 | 1440 | > th | dose dependent | rect. | 5 | 2 |
| 78 | 176.41 | temperature | 15 | 1440 | > th | dose dependent | sin | 8 | NA |
| 79 | 176.41 | temperature | 30 | 1440 | < th | dose dependent | sin | 7 | NA |
| 591 | 182.60 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 3 |
| 707 | 183.55 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 717 | 183.66 | temperature | 30 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 759 | 183.95 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 3 |
| 815 | 184.35 | temperature | 20 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 851 | 184.61 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 900 | 185.00 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 5 |
| 903 | 185.05 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 8 |
| 924 | 185.23 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 8 |