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Os03g0626500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Inositol polyphosphate related phosphatase domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.08 (0.0325) R2 : 0.68
β1 : 1.72 (0.12) R2dD : 0.153 R2D : 0.187
β2 : 3.06 (0.12) R2dC : 0.921 R2C : 0.0392
β3 : 2.6 (0.149) R2dE : 0.446 R2E : -0.411
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.174 (0.071) R2dN8 : 0.00592 R2N8 : 0.00631
σ : 0.607
deviance : 170
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C
peak time of C : 5.01
E
wheather : temperature
threshold : 8.469
memory length : 229
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 3.2
open length of G : 18.3

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
168.1 0.609 6.07 1.73 3.05 2.62 1.07 0.336 0.178 5.06 9.873 230 3.2 18.3
168.17 0.604 6.08 1.73 3.02 2.6 0.908 -- 0.179 5.06 9.496 229 3.2 18.3
169.52 0.606 6.09 1.67 3.08 2.66 -- -0.583 0.15 4.97 8.978 226 3.23 18.2
170 0.607 6.08 1.72 3.06 2.6 -- -- 0.174 5.01 8.469 229 3.2 18.3
268.8 0.764 6.02 1.65 -- -2.27 -- -1.15 0.429 -- -11.57 401 5.47 19.2
234.55 0.718 6.02 2.06 1.82 -- 0.603 -- 0.45 6.94 -- -- -- --
235.49 0.719 6.02 2.07 1.82 -- -- -- 0.448 6.92 -- -- -- --
205.42 0.668 6.11 2.09 -- -2.23 -- -- 0.443 -- -127.4 340 7.2 18
242.23 0.725 6.1 -- 3.26 2.99 -- -- -0.0619 5.07 12.67 236 3.08 18.6
409.08 0.945 6.06 2.11 -- -- -- -- 0.482 -- -- -- -- --
348.9 0.874 6.07 -- 1.84 -- -- -- 0.217 6.85 -- -- -- --
312.85 0.824 6.15 -- -- -2.23 -- -- 0.0966 -- -351.8 344 7.38 17.9
526.81 1.07 6.11 -- -- -- -- -- 0.248 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 170.64 temperature 10.0 270 > th dose dependent rect. 3 18
29 178.73 temperature 30.0 270 < th dose independent rect. 7 20
32 179.26 temperature 10.0 270 > th dose dependent rect. 3 4
42 180.26 humidity 50.0 270 > th dose independent rect. 7 20
73 183.24 wind 5.0 270 < th dose independent rect. 3 4
82 183.71 humidity 80.0 270 > th dose independent rect. 3 4
90 184.18 temperature 30.0 90 < th dose independent rect. 9 19
97 184.39 wind 9.0 270 < th dose dependent rect. 3 4
121 185.54 precipitation 0.1 270 < th dose independent rect. 3 4
122 185.54 precipitation 0.1 270 < th dose dependent rect. 3 4
126 185.79 radiation 20.0 270 < th dose independent rect. 3 4
137 186.34 atmosphere 995.0 270 > th dose dependent rect. 3 4
140 186.38 humidity 50.0 270 > th dose dependent rect. 3 4
144 186.46 temperature 10.0 270 > th dose independent rect. 3 4
146 186.46 temperature 30.0 270 < th dose independent rect. 3 4
147 186.46 humidity 50.0 270 > th dose independent rect. 3 4
149 186.46 atmosphere 995.0 270 > th dose independent rect. 3 4
150 186.46 atmosphere 1015.0 270 < th dose independent rect. 3 4
152 186.46 temperature 10.0 270 > th dose independent rect. 7 20
174 187.12 wind 9.0 270 < th dose independent rect. 7 20
185 187.54 radiation 40.0 270 < th dose dependent rect. 3 4
194 187.66 radiation 10.0 10 < th dose independent rect. 5 17
196 187.74 precipitation 0.1 270 < th dose independent rect. 7 20
197 187.74 precipitation 0.1 270 < th dose dependent rect. 7 20
209 188.04 temperature 30.0 720 < th dose dependent rect. 24 10
216 188.22 atmosphere 995.0 270 > th dose independent rect. 7 20
251 189.19 temperature 10.0 720 > th dose dependent rect. 3 12
266 189.52 radiation 1.0 90 > th dose independent sin 11 NA
285 190.16 temperature 10.0 720 > th dose dependent rect. 21 18
291 190.27 temperature 15.0 720 > th dose dependent sin 6 NA
315 190.72 radiation 1.0 270 > th dose independent rect. 18 12
319 190.75 radiation 1.0 90 > th dose independent rect. 17 14
334 190.97 atmosphere 1015.0 270 < th dose independent rect. 7 20
345 191.08 temperature 10.0 720 > th dose dependent rect. 23 16
356 191.19 wind 1.0 270 > th dose independent rect. 7 20
368 191.32 radiation 1.0 90 > th dose independent rect. 17 16
383 191.47 temperature 30.0 720 < th dose dependent rect. 7 2
387 191.48 atmosphere 1010.0 270 < th dose independent rect. 2 7
397 191.57 wind 7.0 90 < th dose dependent rect. 3 7
401 191.61 temperature 30.0 720 < th dose dependent sin 6 NA
403 191.64 radiation 30.0 270 < th dose independent rect. 2 6
448 192.14 temperature 30.0 270 < th dose dependent rect. 7 7
481 192.32 radiation 1.0 90 < th dose independent sin 11 NA
516 192.62 temperature 25.0 10 > th dose independent rect. 5 17
520 192.64 radiation 1.0 90 < th dose dependent sin 11 NA
538 192.73 temperature 15.0 10 > th dose dependent rect. 4 6
559 192.84 temperature 20.0 270 > th dose independent rect. 3 16
650 193.46 wind 1.0 270 > th dose independent rect. 8 18
666 193.59 radiation 20.0 10 < th dose dependent rect. 5 17
670 193.65 wind 1.0 270 > th dose independent rect. 3 4
724 193.96 temperature 30.0 270 < th dose independent rect. 22 14
788 194.40 temperature 10.0 720 > th dose dependent rect. 19 14
795 194.44 precipitation 0.1 270 < th dose independent rect. 12 10
796 194.44 precipitation 0.1 270 < th dose dependent rect. 12 10
882 194.93 temperature 30.0 90 < th dose dependent rect. 9 20
922 195.16 temperature 10.0 270 > th dose independent rect. 12 10
923 195.16 temperature 10.0 270 > th dose independent rect. 22 14
924 195.16 atmosphere 995.0 270 > th dose independent rect. 22 14
945 195.28 atmosphere 1010.0 270 < th dose independent rect. 3 16
964 195.42 wind 9.0 270 < th dose independent rect. 22 14
983 195.53 temperature 30.0 270 < th dose dependent rect. 7 20
990 195.57 wind 9.0 10 < th dose dependent rect. 4 6