BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0626500 Os03g0626500|Os03g0626500
(301 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G47510.1 | chr1:17435991-17438296 REVERSE LENGTH=335 184 7e-47
AT2G43900.1 | chr2:18178801-18183823 REVERSE LENGTH=1317 95 5e-20
AT2G31830.2 | chr2:13532737-13537665 REVERSE LENGTH=1174 91 8e-19
AT1G65580.1 | chr1:24377598-24383940 REVERSE LENGTH=1102 91 9e-19
AT4G18010.1 | chr4:9991194-9994099 REVERSE LENGTH=647 90 2e-18
AT1G05630.1 | chr1:1682483-1687153 FORWARD LENGTH=1171 89 4e-18
AT5G04980.2 | chr5:1468575-1470684 REVERSE LENGTH=467 85 4e-17
AT1G71710.1 | chr1:26973796-26976774 REVERSE LENGTH=665 84 7e-17
AT1G34120.2 | chr1:12426831-12429526 FORWARD LENGTH=591 84 8e-17
AT2G37440.1 | chr2:15719230-15721885 FORWARD LENGTH=480 82 3e-16
AT5G65090.1 | chr5:26004282-26006656 FORWARD LENGTH=530 82 3e-16
AT3G63240.1 | chr3:23364411-23366876 REVERSE LENGTH=548 81 6e-16
AT2G32010.1 | chr2:13625344-13628081 FORWARD LENGTH=595 80 1e-15
AT1G05470.1 | chr1:1608558-1611291 REVERSE LENGTH=618 80 1e-15
AT2G01900.1 | chr2:406136-408933 FORWARD LENGTH=418 69 3e-12
>AT1G47510.1 | chr1:17435991-17438296 REVERSE LENGTH=335
Length = 334
Score = 184 bits (466), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 83/125 (66%), Positives = 103/125 (82%)
Query: 171 DITVWLGDLNYRLQGISSIPARKLIEENRQSKLRGKDQLLQEAEKGEVFNGYCEGTLLFK 230
D+TVWLGDLNYR+Q +S+ P R LI+ + QS L KDQLLQEAE+GE+F GY EGTL FK
Sbjct: 206 DLTVWLGDLNYRIQDVSNHPVRSLIQNHLQSVLVSKDQLLQEAERGEIFKGYSEGTLGFK 265
Query: 231 PTYKYNIGSSNYDTSYKIRVPSWTDRILFKVDHTSGLDAVLNSYEALDCIRSSDHKPVRA 290
PTYKYN+GSS+YDTS+KIRVP+WTDRILFK+ T + A L+SY+++D + SDHKPV+A
Sbjct: 266 PTYKYNVGSSDYDTSHKIRVPAWTDRILFKIQDTDNIQATLHSYDSIDQVYGSDHKPVKA 325
Query: 291 HLCLK 295
LCLK
Sbjct: 326 DLCLK 330
>AT2G43900.1 | chr2:18178801-18183823 REVERSE LENGTH=1317
Length = 1316
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 73/138 (52%), Gaps = 12/138 (8%)
Query: 171 DITVWLGDLNYRLQGISSIPARKLIEENRQSKLRGKDQLLQEAEKGEVFNGYCEGTLLFK 230
D+ V+ GD NYRL GIS AR + + LR KDQL E + G VF G E + F
Sbjct: 788 DMVVFFGDFNYRLFGISYDEARDFVSQRSFDWLREKDQLRAEMKAGRVFQGMREAIITFP 847
Query: 231 PTYKY---NIGSSNYDTSYKIRVPSWTDRILFKVDHTS-----GLD----AVLNSYEALD 278
PTYK+ G YD+ K R+P+W DR++F+ TS LD A + Y+A
Sbjct: 848 PTYKFERHRPGLGGYDSGEKKRIPAWCDRVIFRDTRTSPESECSLDCPVVASIMLYDACM 907
Query: 279 CIRSSDHKPVRAHLCLKV 296
+ SDHKPVR +K+
Sbjct: 908 DVTESDHKPVRCKFHVKI 925
>AT2G31830.2 | chr2:13532737-13537665 REVERSE LENGTH=1174
Length = 1173
Score = 90.9 bits (224), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 71/135 (52%), Gaps = 12/135 (8%)
Query: 170 GDITVWLGDLNYRLQGISSIPARKLIEENRQSKLRGKDQLLQEAEKGEVFNGYCEGTLLF 229
D+ + GD NYRL GI+ AR I LR KDQL QE +G+VF G E + F
Sbjct: 790 ADLVAFFGDFNYRLFGITYDEARDFISHRSFDWLREKDQLRQEMNEGKVFQGMREALITF 849
Query: 230 KPTYKY---NIGSSNYDTSYKIRVPSWTDRILFKVDHTSGLD------AVLNS---YEAL 277
PTYK+ G YD+ K R+P+W DR++++ + + V++S YEA
Sbjct: 850 PPTYKFEKNKPGLGGYDSGEKKRIPAWCDRVIYRDNQSISYTECSLKCPVVSSTIMYEAC 909
Query: 278 DCIRSSDHKPVRAHL 292
+ SDHKPVR L
Sbjct: 910 MDVTESDHKPVRCKL 924
>AT1G65580.1 | chr1:24377598-24383940 REVERSE LENGTH=1102
Length = 1101
Score = 90.5 bits (223), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 73/139 (52%), Gaps = 14/139 (10%)
Query: 171 DITVWLGDLNYRLQGISSIPARKLIEENRQSKLRGKDQLLQEAEKGEVFNGYCEGTLLFK 230
D+ ++LGD NYRL I+ R I + LR KDQL E E G VF G E + F
Sbjct: 749 DMVIFLGDFNYRLDDITYDETRDFISQRCFDWLREKDQLHTEMEAGNVFQGMREAIIRFP 808
Query: 231 PTYKY---NIGSSNYDTSYKIRVPSWTDRILFKVDHTSGLDA----------VLNSYEAL 277
PTYK+ G + YD+ K R+P+W DRIL++ D+ L A ++ Y+A
Sbjct: 809 PTYKFERHQAGLAGYDSGEKKRIPAWCDRILYR-DNKKHLGAECSLDCPVVSSISQYDAC 867
Query: 278 DCIRSSDHKPVRAHLCLKV 296
+ SDHKPVR +K+
Sbjct: 868 MEVTDSDHKPVRCVFSVKI 886
>AT4G18010.1 | chr4:9991194-9994099 REVERSE LENGTH=647
Length = 646
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 70/135 (51%), Gaps = 12/135 (8%)
Query: 159 LKVDKHAVGGCGDITVWLGDLNYRLQGISSIPARKLIEENRQSKLRGKDQLLQEAEKGEV 218
L D+ C D W GDLNYRL +S RKL+ + R +L+ DQL++E +G V
Sbjct: 483 LDTDQPRTIPCHDQVFWFGDLNYRL-NMSDGEVRKLVSQKRWDELKNSDQLIRELRRGHV 541
Query: 219 FNGYCEGTLLFKPTYKYNIGSSNY-----DTSYKIRVPSWTDRILFKVDHTSGLDAVLNS 273
F+G+ EG + F PTYKY S Y K R P+W DRIL+ G
Sbjct: 542 FDGWREGPIKFPPTYKYEFDSDRYAGENLREPEKKRAPAWCDRILW-----LGKGIRQEC 596
Query: 274 YEALDCIRSSDHKPV 288
Y+ + IR SDH+PV
Sbjct: 597 YKRSE-IRMSDHRPV 610
>AT1G05630.1 | chr1:1682483-1687153 FORWARD LENGTH=1171
Length = 1170
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 75/144 (52%), Gaps = 16/144 (11%)
Query: 158 ELKVDKHAVGGCGDITVWLGDLNYRLQGISSIPARKLIEENRQSKLRGKDQLLQEAEKGE 217
E+K D A D+ + GD NYRL GI+ AR I + LR +DQL E + G+
Sbjct: 807 EIKSDLAAA----DMVAFFGDFNYRLFGITYDEARDFISQRSFDWLRERDQLRAEMKVGK 862
Query: 218 VFNGYCEGTLLFKPTYKY---NIGSSNYDTSYKIRVPSWTDRILFKVDHTSGLD------ 268
VF G E + F PTYK+ G YD+ K R+P+W DR++++ +S
Sbjct: 863 VFQGMREALITFPPTYKFERNRSGLGGYDSGEKKRIPAWCDRVIYRDTQSSPFSESNLQC 922
Query: 269 AVLNS---YEALDCIRSSDHKPVR 289
V++S YEA + SDHKPVR
Sbjct: 923 PVVSSVIMYEACMDVTESDHKPVR 946
>AT5G04980.2 | chr5:1468575-1470684 REVERSE LENGTH=467
Length = 466
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 66/124 (53%), Gaps = 13/124 (10%)
Query: 171 DITVWLGDLNYRLQGISSIPARKLIEENRQSKLRGKDQLLQEAEKGEVFNGYCEGTLLFK 230
D +WLGDLNYR+ +S + L+++N L KDQL E + G VF G+ EG + F
Sbjct: 330 DRVIWLGDLNYRI-ALSYSETKTLLDKNAWDTLLNKDQLKIERDAGRVFKGWHEGKIFFA 388
Query: 231 PTYKYNIGSSNY--DTSY----KIRVPSWTDRILFKVDHTSGLDAVLNSYEALDCIRSSD 284
PTYKY+ S Y DTS K R P+W DRIL+ D L V R SD
Sbjct: 389 PTYKYSYNSDAYAGDTSKEKKNKRRTPAWCDRILWHGDGIRQLSYVRGES------RFSD 442
Query: 285 HKPV 288
H+PV
Sbjct: 443 HRPV 446
>AT1G71710.1 | chr1:26973796-26976774 REVERSE LENGTH=665
Length = 664
Score = 84.3 bits (207), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 68/131 (51%), Gaps = 10/131 (7%)
Query: 174 VWLGDLNYRLQGISSIPARKLIEENRQSKLRGKDQLLQEAEKGEVFNGYCEGTLLFKPTY 233
+WLGDLNYRL S R LI + SKL DQL++E KG F+G+ EGTL F PTY
Sbjct: 517 IWLGDLNYRLSS-SYEKTRDLISKREWSKLLEYDQLVKEYRKGRAFDGWSEGTLHFPPTY 575
Query: 234 KYNIGSSNY---DTSYKIRVPSWTDRILFKVDHTSGLDAVLNSYEALDCIRSSDHKPVRA 290
KY S Y D R P+W DR+L + G L Y + + SDH+PV A
Sbjct: 576 KYQANSDEYTANDGKAPKRTPAWCDRVL-----SYGKGMRLVHYRRTEQ-KFSDHRPVTA 629
Query: 291 HLCLKVHGDSA 301
+V SA
Sbjct: 630 IYMAEVEVFSA 640
>AT1G34120.2 | chr1:12426831-12429526 FORWARD LENGTH=591
Length = 590
Score = 84.0 bits (206), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 69/127 (54%), Gaps = 10/127 (7%)
Query: 174 VWLGDLNYRLQGISSIPARKLIEENRQSKLRGKDQLLQEAEKGEVFNGYCEGTLLFKPTY 233
+WLGDLNYR+ +S +LI +L DQL +E KG +F G+ EGTL F PTY
Sbjct: 448 IWLGDLNYRI-NLSYEKTHELIARKEWQRLVEYDQLSREMTKGNLFEGWSEGTLDFAPTY 506
Query: 234 KYNIGSSNY---DTSYKIRVPSWTDRILFKVDHTSGLDAVLNSYEALDCIRSSDHKPVRA 290
KY I S NY D R P+W DRI++ +G L +Y + I+ SDH+PV A
Sbjct: 507 KYEIDSENYIGDDPESGKRRPAWCDRIIW-----NGKGMKLFNYRRNE-IKLSDHRPVTA 560
Query: 291 HLCLKVH 297
+V
Sbjct: 561 TFLAEVE 567
>AT2G37440.1 | chr2:15719230-15721885 FORWARD LENGTH=480
Length = 479
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 69/134 (51%), Gaps = 17/134 (12%)
Query: 171 DITVWLGDLNYRLQGISSIPARKLIEENRQSKLRGKDQLLQEAEKGEVFNGYCEGTLLFK 230
D +WLGDLNYRL+ S + + + + L KDQL E G +F G+ EG + F
Sbjct: 300 DKVIWLGDLNYRLRASSDL--HEQLRNHDWESLLEKDQLKIEQRAGRIFKGWEEGKIYFA 357
Query: 231 PTYKYNIGSSNY-----DTSYKIRVPSWTDRILFKVDHTSGLDAVLNSYEALDCIRSSDH 285
PTYKY I S NY + K R P+W DRIL+K D L V + SDH
Sbjct: 358 PTYKYRINSDNYVVQTEKSKEKRRTPAWCDRILWKGDGMKQLWYVRGES------KFSDH 411
Query: 286 KPVRA----HLCLK 295
+PV++ H+ LK
Sbjct: 412 RPVQSLFSVHIDLK 425
>AT5G65090.1 | chr5:26004282-26006656 FORWARD LENGTH=530
Length = 529
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 69/131 (52%), Gaps = 12/131 (9%)
Query: 171 DITVWLGDLNYRLQGISSIPARKLIEENRQSKLRGKDQLLQEAEKGEVFNGYCEGTLLFK 230
D +WLGDLNYR+ ++ R L+E+N L +DQL E G VF+G+ EG + F
Sbjct: 371 DRVLWLGDLNYRV-ALTYEETRVLLEDNDWDTLLERDQLNMERGAGRVFSGFQEGQIFFA 429
Query: 231 PTYKYNIGSSNY-----DTSYKIRVPSWTDRILFKVDHTSGLDAVLNSYEALDCIRSSDH 285
PTYKY+ S Y + K R P+W DRIL+K + L + R SDH
Sbjct: 430 PTYKYSQNSDAYAGEMTKSKKKRRTPAWCDRILWKGEGIEQLSYIRGES------RFSDH 483
Query: 286 KPVRAHLCLKV 296
+PV A ++V
Sbjct: 484 RPVCAIFAVEV 494
>AT3G63240.1 | chr3:23364411-23366876 REVERSE LENGTH=548
Length = 547
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 72/131 (54%), Gaps = 12/131 (9%)
Query: 171 DITVWLGDLNYRLQGISSIPARKLIEENRQSKLRGKDQLLQEAEKGEVFNGYCEGTLLFK 230
D +WLGDLNYR+ +S A+ L+E L KDQL E KG VF G+ EGT+ F
Sbjct: 387 DRVIWLGDLNYRI-ALSYRSAKALVEMRDWRALLEKDQLRIEQRKGCVFEGWKEGTIYFP 445
Query: 231 PTYKYNIGSSNYD-----TSYKIRVPSWTDRILFKVDHTSGLDAVLNSYEALDCIRSSDH 285
PTYKY+ S Y K R P+W DRIL+ H SG+ + SY + R SDH
Sbjct: 446 PTYKYSNNSDIYAGDDRLPKAKRRTPAWCDRILW---HGSGISQL--SYVRGES-RFSDH 499
Query: 286 KPVRAHLCLKV 296
+PV + +++
Sbjct: 500 RPVYSLFSVEI 510
>AT2G32010.1 | chr2:13625344-13628081 FORWARD LENGTH=595
Length = 594
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 66/123 (53%), Gaps = 12/123 (9%)
Query: 171 DITVWLGDLNYRLQGISSIPARKLIEENRQSKLRGKDQLLQEAEKGEVFNGYCEGTLLFK 230
D +WLGDLNYR+ +S A+ L+E L DQL E ++G VF G+ EG + F
Sbjct: 435 DRVIWLGDLNYRI-ALSYRSAKALVEMQNWRALLENDQLRIEQKRGHVFKGWNEGKIYFP 493
Query: 231 PTYKYNIGSSNY-----DTSYKIRVPSWTDRILFKVDHTSGLDAVLNSYEALDCIRSSDH 285
PTYKY+ S Y K R P+W DRIL+ H GL + SY + R SDH
Sbjct: 494 PTYKYSNNSDRYAGGDLHPKEKRRTPAWCDRILW---HGEGLHQL--SYVRGES-RFSDH 547
Query: 286 KPV 288
+PV
Sbjct: 548 RPV 550
>AT1G05470.1 | chr1:1608558-1611291 REVERSE LENGTH=618
Length = 617
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 65/131 (49%), Gaps = 12/131 (9%)
Query: 171 DITVWLGDLNYRLQGISSIPARKLIEENRQSKLRGKDQLLQEAEKGEVFNGYCEGTLLFK 230
D +WLGDLNYR+ +S A+ L+E L DQL E ++G VF G+ EG + F
Sbjct: 458 DRVIWLGDLNYRI-ALSYRSAKALVEMQNWRALLENDQLRIEQKRGHVFKGWNEGKIYFP 516
Query: 231 PTYKYNIGSSNYD-----TSYKIRVPSWTDRILFKVDHTSGLDAVLNSYEALDCIRSSDH 285
PTYKY+ S Y K R P+W DRIL+ + L V R SDH
Sbjct: 517 PTYKYSRNSDRYSGDDLHPKEKRRTPAWCDRILWFGEGLHQLSYVRGE------SRFSDH 570
Query: 286 KPVRAHLCLKV 296
+PV C +V
Sbjct: 571 RPVYGIFCAEV 581
>AT2G01900.1 | chr2:406136-408933 FORWARD LENGTH=418
Length = 417
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 68/129 (52%), Gaps = 19/129 (14%)
Query: 171 DITVWLGDLNYRLQGISSIPARK---LIEENRQSKLRGKDQLLQEAEKGEVFNGYCEGTL 227
D ++LGDLNYR+ S+P K L+E + + L DQL E G++F G+ EG +
Sbjct: 258 DRVIFLGDLNYRI----SLPEEKTRLLVESKKWNILLENDQLRMEIMNGQIFRGWQEGIV 313
Query: 228 LFKPTYKY------NIGSSNYDTSYKIRVPSWTDRILFKVDHTSGLDAVLNSYEALDCIR 281
F PTYKY G Y K R P+W DRI++ + +GL + Y + +
Sbjct: 314 KFAPTYKYVPNSDLYYGCITYKKDEKKRAPAWCDRIIW---YGNGLKQ--HEYTRGET-K 367
Query: 282 SSDHKPVRA 290
SDH+PV+A
Sbjct: 368 ISDHRPVKA 376
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.135 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,512,436
Number of extensions: 265309
Number of successful extensions: 641
Number of sequences better than 1.0e-05: 15
Number of HSP's gapped: 613
Number of HSP's successfully gapped: 16
Length of query: 301
Length of database: 11,106,569
Length adjustment: 98
Effective length of query: 203
Effective length of database: 8,419,801
Effective search space: 1709219603
Effective search space used: 1709219603
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 111 (47.4 bits)