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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os03g0621700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.29 (0.0203) R2 : 0.00108
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.03 (0.0428) R2dN8 : 0.00139 R2N8 : 0.00108
σ : 0.382
deviance : 67.15
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
60.17 0.364 3.27 0.135 0.219 -1.23 -0.434 10.7 0.0416 6.1 0.4393 10 -- --
60.26 0.364 3.28 0.119 0.213 1.87 -0.449 -- 0.0422 6.12 0.4393 10 -- --
60.6 0.363 3.27 0.148 0.221 -1.79 -- 12.7 0.0428 6.37 0.4578 9 -- --
60.63 0.363 3.28 0.109 0.215 1.83 -- -- 0.0451 6.68 0.4193 9 -- --
63.02 0.37 3.28 0.141 -- -1.46 -- 11.7 0.0479 -- 0.479 9 -- --
63.69 0.374 3.28 0.136 0.227 -- -0.358 -- 0.0391 6.16 -- -- -- --
63.99 0.375 3.28 0.133 0.226 -- -- -- 0.0406 6.46 -- -- -- --
63.03 0.37 3.28 0.116 -- 1.9 -- -- 0.0495 -- 0.4607 9 -- --
60.94 0.364 3.28 -- 0.217 1.86 -- -- 0.0342 6.66 0.3933 9 -- --
66.64 0.381 3.28 0.139 -- -- -- -- 0.0454 -- -- -- -- --
64.46 0.376 3.28 -- 0.228 -- -- -- 0.0258 6.43 -- -- -- --
63.38 0.371 3.29 -- -- 1.93 -- -- 0.0373 -- 0.4405 9 -- --
67.15 0.382 3.29 -- -- -- -- -- 0.03 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 51.48 temperature 25.0 90 > th dose dependent rect. 2 2
2 51.52 temperature 25.0 270 > th dose independent rect. 2 1
4 51.54 temperature 25.0 90 > th dose dependent rect. 1 4
13 52.55 atmosphere 1005.0 10 > th dose dependent rect. 2 3
25 54.66 atmosphere 1005.0 270 > th dose dependent rect. 1 2
26 54.67 precipitation 0.1 10 < th dose independent rect. 3 23
27 54.67 precipitation 0.1 10 < th dose dependent rect. 3 23
32 54.87 atmosphere 1000.0 30 > th dose independent rect. 3 23
38 55.27 radiation 1.0 43200 < th dose dependent rect. 3 1
49 55.88 radiation 1.0 4320 < th dose dependent rect. 3 1
61 56.01 wind 9.0 1440 < th dose independent rect. 3 1
62 56.01 temperature 10.0 1440 > th dose independent rect. 3 1
65 56.01 temperature 30.0 1440 < th dose independent rect. 3 1
69 56.01 humidity 50.0 1440 > th dose independent rect. 3 1
78 56.01 atmosphere 995.0 1440 > th dose independent rect. 3 1
79 56.01 radiation 1.0 1440 < th dose independent rect. 3 1
99 56.01 temperature 10.0 1440 > th dose independent rect. 4 23
121 56.15 atmosphere 1005.0 30 > th dose independent rect. 2 1
122 56.16 wind 3.0 30 < th dose independent rect. 2 1
131 56.18 wind 5.0 30 < th dose dependent rect. 2 1
137 56.20 humidity 90.0 10 < th dose independent rect. 4 1
140 56.21 humidity 90.0 30 > th dose independent rect. 2 1
141 56.21 humidity 50.0 30 > th dose dependent rect. 2 1
145 56.22 temperature 10.0 30 > th dose independent rect. 2 1
147 56.22 temperature 30.0 30 < th dose independent rect. 2 1
148 56.22 humidity 50.0 30 > th dose independent rect. 2 1
152 56.22 atmosphere 1010.0 30 < th dose independent rect. 2 1
154 56.22 radiation 1.0 30 < th dose independent rect. 2 1
159 56.22 precipitation 0.1 30 < th dose independent rect. 2 1
160 56.22 temperature 10.0 30 > th dose independent rect. 3 23
162 56.22 radiation 1.0 30 < th dose dependent rect. 2 1
167 56.22 precipitation 0.1 30 < th dose dependent rect. 2 1
172 56.31 atmosphere 1015.0 30 < th dose dependent rect. 2 1
175 56.36 wind 1.0 30 > th dose independent rect. 2 1
176 56.36 temperature 30.0 30 < th dose dependent rect. 2 1
240 57.01 wind 9.0 30 < th dose independent rect. 3 23
245 57.17 temperature 25.0 1440 < th dose independent rect. 1 1
248 57.22 wind 1.0 30 > th dose independent rect. 4 1
253 57.32 temperature 25.0 10 > th dose independent rect. 4 1
257 57.34 temperature 25.0 90 > th dose dependent rect. 4 1
258 57.35 atmosphere 1005.0 30 > th dose dependent rect. 4 1
261 57.39 atmosphere 1005.0 30 > th dose independent rect. 2 3
270 57.71 humidity 50.0 30 > th dose independent rect. 3 23
271 57.72 atmosphere 1000.0 10 > th dose independent rect. 5 21
279 57.82 wind 3.0 30 < th dose dependent rect. 2 3
289 57.98 wind 3.0 30 < th dose independent rect. 2 3
304 58.19 humidity 90.0 270 < th dose independent rect. 1 1
313 58.27 wind 1.0 30 > th dose dependent rect. 4 1
321 58.38 wind 3.0 30 < th dose independent rect. 4 1
326 58.41 precipitation 0.1 30 < th dose independent rect. 4 1
327 58.41 precipitation 0.1 30 < th dose dependent rect. 4 1
328 58.42 humidity 90.0 90 < th dose independent rect. 2 3
360 58.51 temperature 30.0 30 < th dose dependent rect. 4 1
366 58.54 humidity 90.0 10 < th dose dependent rect. 4 1
369 58.55 atmosphere 1005.0 30 > th dose independent rect. 4 1
373 58.56 temperature 10.0 30 > th dose independent rect. 4 1
375 58.56 temperature 30.0 30 < th dose independent rect. 4 1
376 58.56 humidity 50.0 30 > th dose independent rect. 4 1
380 58.56 atmosphere 995.0 30 > th dose independent rect. 4 1
381 58.56 atmosphere 1010.0 30 < th dose independent rect. 4 1
383 58.56 radiation 1.0 30 < th dose independent rect. 4 1
389 58.56 temperature 10.0 30 > th dose independent rect. 5 23
390 58.56 radiation 10.0 30 < th dose dependent rect. 4 1
397 58.59 precipitation 0.1 10 < th dose independent rect. 2 3
399 58.59 temperature 10.0 30 > th dose dependent rect. 4 1
400 58.59 precipitation 0.1 10 < th dose dependent rect. 2 3
401 58.60 wind 7.0 1440 < th dose independent rect. 5 1
403 58.60 temperature 10.0 1440 > th dose independent rect. 5 1
406 58.60 temperature 30.0 1440 < th dose independent rect. 5 1
410 58.60 humidity 50.0 1440 > th dose independent rect. 5 1
419 58.60 atmosphere 995.0 1440 > th dose independent rect. 5 1
420 58.60 atmosphere 1015.0 1440 < th dose independent rect. 5 1
421 58.60 radiation 20.0 1440 < th dose independent rect. 5 1
431 58.60 temperature 10.0 1440 > th dose independent rect. 6 23
440 58.67 wind 9.0 30 < th dose dependent rect. 4 1
444 58.69 humidity 50.0 30 > th dose dependent rect. 4 1
459 58.80 atmosphere 1015.0 30 < th dose dependent rect. 4 1
511 59.02 atmosphere 1000.0 10 > th dose independent rect. 16 10
519 59.05 radiation 1.0 10 < th dose dependent rect. 2 14
528 59.10 radiation 1.0 10 < th dose dependent rect. 2 12
532 59.11 temperature 10.0 30 > th dose independent rect. 2 3
534 59.11 temperature 30.0 30 < th dose independent rect. 2 3
535 59.11 humidity 50.0 30 > th dose independent rect. 2 3
539 59.11 atmosphere 1010.0 30 < th dose independent rect. 2 3
541 59.11 radiation 1.0 30 < th dose independent rect. 2 3
546 59.11 temperature 10.0 30 > th dose independent rect. 5 21
549 59.11 radiation 10.0 30 < th dose dependent rect. 2 3
555 59.12 wind 9.0 30 < th dose independent rect. 5 23
562 59.15 atmosphere 1000.0 10 > th dose independent rect. 14 12
564 59.16 wind 9.0 30 < th dose independent rect. 5 21
565 59.16 precipitation 0.1 30 < th dose independent rect. 5 21
566 59.16 precipitation 0.1 30 < th dose dependent rect. 5 21
583 59.17 radiation 1.0 10 < th dose independent rect. 2 12
606 59.21 humidity 50.0 30 > th dose independent rect. 5 21
630 59.34 radiation 1.0 10 < th dose dependent rect. 2 6
640 59.36 precipitation 0.1 10 < th dose independent rect. 2 14
645 59.36 precipitation 0.1 10 < th dose dependent rect. 2 14
651 59.38 temperature 30.0 30 < th dose independent rect. 3 23
663 59.42 radiation 1.0 10 < th dose independent rect. 2 6
679 59.47 wind 9.0 1440 < th dose independent rect. 3 3
680 59.47 temperature 10.0 1440 > th dose independent rect. 3 3
683 59.47 temperature 30.0 1440 < th dose independent rect. 3 3
687 59.47 humidity 50.0 1440 > th dose independent rect. 3 3
696 59.47 atmosphere 995.0 1440 > th dose independent rect. 3 3
697 59.47 radiation 20.0 1440 < th dose independent rect. 3 3
707 59.47 temperature 10.0 1440 > th dose independent rect. 6 21
716 59.51 precipitation 0.1 10 < th dose independent rect. 2 12
717 59.51 precipitation 0.1 10 < th dose dependent rect. 2 12
740 59.60 wind 3.0 30 < th dose dependent rect. 2 6
744 59.61 atmosphere 995.0 30 > th dose dependent rect. 5 21
751 59.62 wind 1.0 10 > th dose independent rect. 5 23
753 59.63 atmosphere 995.0 720 > th dose independent rect. 23 16
760 59.65 humidity 80.0 14400 < th dose dependent rect. 2 7
763 59.66 radiation 40.0 10 < th dose dependent rect. 14 12
769 59.69 radiation 30.0 10 < th dose dependent rect. 16 10
774 59.71 radiation 10.0 10 < th dose independent rect. 16 10
775 59.71 humidity 60.0 10 > th dose independent rect. 14 12
780 59.72 temperature 30.0 30 < th dose independent rect. 5 21
794 59.77 radiation 40.0 30 < th dose independent rect. 14 12
798 59.78 atmosphere 995.0 720 > th dose independent rect. 14 1
802 59.79 wind 9.0 10 < th dose independent rect. 16 10
803 59.79 radiation 10.0 10 < th dose independent rect. 14 12
811 59.81 humidity 50.0 30 > th dose dependent rect. 2 3
817 59.83 radiation 30.0 10 < th dose independent rect. 16 10
832 59.88 temperature 10.0 10 > th dose independent rect. 16 10
833 59.88 humidity 50.0 10 > th dose independent rect. 16 10
835 59.88 temperature 10.0 10 > th dose independent rect. 2 14
837 59.88 humidity 50.0 10 > th dose independent rect. 2 14
838 59.88 atmosphere 1015.0 10 < th dose independent rect. 2 14
839 59.88 wind 9.0 720 < th dose dependent rect. 2 1
843 59.89 atmosphere 995.0 720 > th dose independent rect. 3 23
851 59.91 radiation 20.0 10 < th dose dependent rect. 14 12
854 59.92 temperature 25.0 720 > th dose dependent rect. 6 2
859 59.93 precipitation 0.1 10 < th dose independent rect. 16 10
861 59.93 precipitation 0.1 10 < th dose dependent rect. 16 10
865 59.95 wind 1.0 30 > th dose independent rect. 5 21
869 59.96 precipitation 0.1 10 < th dose independent rect. 21 23
873 59.96 precipitation 0.1 10 < th dose dependent rect. 21 23
884 60.00 temperature 10.0 1440 > th dose independent rect. 17 10
887 60.00 radiation 30.0 1440 < th dose independent rect. 17 10
893 60.00 temperature 10.0 1440 > th dose independent rect. 3 14
915 60.02 precipitation 0.1 10 < th dose independent rect. 11 23
918 60.02 precipitation 0.1 10 < th dose dependent rect. 11 23
921 60.03 atmosphere 995.0 10 > th dose independent rect. 2 14
926 60.04 wind 9.0 10 < th dose independent rect. 2 14
938 60.08 atmosphere 1000.0 10 > th dose independent rect. 8 18
949 60.11 humidity 50.0 10 > th dose independent rect. 2 12
956 60.12 wind 9.0 10 < th dose independent rect. 14 12
969 60.14 precipitation 0.1 30 < th dose independent sin 5 NA
972 60.14 precipitation 0.1 30 < th dose dependent sin 5 NA
986 60.16 humidity 80.0 4320 < th dose dependent rect. 1 1
989 60.16 precipitation 0.1 30 > th dose dependent rect. 23 7
997 60.17 precipitation 0.1 30 > th dose dependent rect. 3 2