Os03g0617500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0617500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Cyclin-like domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 256.67 | 0.753 | 8.08 | -1.61 | 2.01 | -2.13 | 2.01 | 2.46 | 0.634 | 18.8 | 20.6 | 965 | 2.77 | -- |
| 272.47 | 0.769 | 8.02 | -1.08 | 2.02 | -2.28 | 1.51 | -- | 0.759 | 18.7 | 20.67 | 973 | 2.42 | -- |
| 263.24 | 0.756 | 8.09 | -1.75 | 2.11 | -2.04 | -- | 2.36 | 0.6 | 18.9 | 20.6 | 1110 | 3.43 | -- |
| 277.49 | 0.776 | 8.03 | -1.17 | 2.11 | -2.17 | -- | -- | 0.731 | 18.9 | 20.6 | 1089 | 2.75 | -- |
| 446.8 | 0.984 | 7.94 | -1.17 | -- | -2.75 | -- | 1.15 | 0.749 | -- | 20.9 | 622 | 2.32 | -- |
| 411.75 | 0.951 | 7.91 | -0.347 | 2.19 | -- | 0.979 | -- | 1.28 | 19.5 | -- | -- | -- | -- |
| 414.2 | 0.953 | 7.91 | -0.372 | 2.19 | -- | -- | -- | 1.28 | 19.6 | -- | -- | -- | -- |
| 409.21 | 0.942 | 7.94 | -1.19 | -- | -2.8 | -- | -- | 0.635 | -- | 25.1 | 538 | 2.42 | -- |
| 307.33 | 0.816 | 7.98 | -- | 2.05 | -1.91 | -- | -- | 0.951 | 18.9 | 20.6 | 973 | 2.78 | -- |
| 671.84 | 1.21 | 7.86 | -0.403 | -- | -- | -- | -- | 1.25 | -- | -- | -- | -- | -- |
| 417.85 | 0.956 | 7.9 | -- | 2.19 | -- | -- | -- | 1.32 | 19.6 | -- | -- | -- | -- |
| 365.74 | 0.891 | 7.93 | -- | -- | -2.47 | -- | -- | 0.854 | -- | 25.2 | 346 | 1.32e-06 | -- |
| 676.12 | 1.21 | 7.85 | -- | -- | -- | -- | -- | 1.29 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 272.51 | temperature | 20 | 720 | < th | dose independent | sin | 8 | NA |
| 3 | 274.07 | temperature | 20 | 720 | < th | dose independent | rect. | 23 | 8 |
| 5 | 274.87 | temperature | 20 | 720 | < th | dose independent | rect. | 21 | 12 |
| 8 | 275.06 | temperature | 20 | 720 | < th | dose independent | rect. | 1 | 6 |
| 10 | 275.27 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 4 |
| 41 | 279.40 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 10 |
| 56 | 280.13 | temperature | 20 | 720 | > th | dose independent | rect. | 16 | 17 |
| 89 | 282.08 | temperature | 25 | 720 | < th | dose dependent | sin | 9 | NA |
| 101 | 282.56 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 12 |
| 102 | 282.57 | temperature | 25 | 720 | < th | dose dependent | rect. | 20 | 14 |
| 104 | 282.60 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 5 |
| 122 | 283.26 | temperature | 20 | 720 | > th | dose independent | sin | 10 | NA |
| 334 | 288.59 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 403 | 290.34 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 7 |
| 443 | 291.25 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 452 | 291.40 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 461 | 291.61 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 4 |
| 500 | 292.42 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 634 | 294.86 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 17 |
| 691 | 295.94 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 21 |
| 702 | 296.09 | temperature | 20 | 720 | > th | dose independent | rect. | 23 | 18 |
| 799 | 297.45 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 962 | 299.29 | temperature | 20 | 720 | > th | dose independent | no | NA | NA |