Os03g0612600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ribosomal protein L25-like domain containing protein.
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Os03g0612600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ribosomal protein L25-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32.9 | 0.269 | 12.2 | -0.499 | 1.52 | 0.742 | -0.918 | -0.53 | -0.401 | 19.2 | 21.56 | 57 | -- | -- |
| 33.08 | 0.27 | 12.2 | -0.536 | 1.52 | 0.862 | -0.886 | -- | -0.406 | 19.1 | 21.43 | 62 | -- | -- |
| 34.86 | 0.277 | 12.2 | -0.481 | 1.51 | 0.774 | -- | -0.528 | -0.401 | 19.1 | 21.44 | 20 | -- | -- |
| 35.11 | 0.278 | 12.2 | -0.513 | 1.52 | 0.899 | -- | -- | -0.405 | 19.1 | 21.4 | 2 | -- | -- |
| 155.25 | 0.583 | 12.1 | -0.47 | -- | 0.767 | -- | -0.655 | -0.401 | -- | 22.6 | 10 | -- | -- |
| 39.85 | 0.296 | 12.2 | -0.689 | 1.52 | -- | -0.965 | -- | -0.485 | 19.4 | -- | -- | -- | -- |
| 42.38 | 0.305 | 12.2 | -0.667 | 1.52 | -- | -- | -- | -0.487 | 19.4 | -- | -- | -- | -- |
| 155.83 | 0.584 | 12.1 | -0.529 | -- | 0.832 | -- | -- | -0.405 | -- | 23 | 7 | -- | -- |
| 41.49 | 0.3 | 12.2 | -- | 1.52 | 1.17 | -- | -- | -0.335 | 19.1 | 21.14 | 2 | -- | -- |
| 165.32 | 0.601 | 12.2 | -0.692 | -- | -- | -- | -- | -0.512 | -- | -- | -- | -- | -- |
| 54.11 | 0.344 | 12.2 | -- | 1.53 | -- | -- | -- | -0.412 | 19.3 | -- | -- | -- | -- |
| 162.68 | 0.596 | 12.1 | -- | -- | 1.01 | -- | -- | -0.325 | -- | 23.1 | 2 | -- | -- |
| 177.97 | 0.623 | 12.1 | -- | -- | -- | -- | -- | -0.435 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.79 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 3 | 28.05 | temperature | 20.0 | 90 | > th | dose independent | rect. | 15 | 17 |
| 4 | 28.22 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 6 | 28.26 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 5 |
| 9 | 28.38 | wind | 7.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 16 | 28.49 | temperature | 10.0 | 43200 | > th | dose independent | rect. | 9 | 7 |
| 21 | 28.59 | humidity | 80.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 22 | 28.60 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 2 | 5 |
| 25 | 28.62 | temperature | 15.0 | 270 | > th | dose independent | rect. | 5 | 23 |
| 27 | 28.65 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 4 | 5 |
| 33 | 28.71 | temperature | 20.0 | 90 | > th | dose independent | rect. | 3 | 5 |
| 35 | 28.78 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 36 | 28.78 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 15 | 17 |
| 38 | 28.82 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 21 |
| 39 | 28.82 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 41 | 28.83 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 7 |
| 43 | 28.85 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 47 | 28.89 | wind | 9.0 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 58 | 28.96 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 60 | 28.96 | temperature | 30.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 61 | 28.96 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 64 | 28.96 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 65 | 28.96 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 66 | 28.96 | radiation | 20.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 69 | 28.96 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 70 | 28.97 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 3 |
| 72 | 28.97 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 85 | 29.03 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 100 | 29.09 | wind | 7.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 103 | 29.10 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 19 |
| 105 | 29.10 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 19 |
| 106 | 29.11 | humidity | 90.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 114 | 29.15 | humidity | 80.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 121 | 29.18 | wind | 5.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 125 | 29.19 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 19 |
| 139 | 29.26 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 141 | 29.26 | temperature | 30.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 142 | 29.26 | humidity | 50.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 144 | 29.26 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 145 | 29.26 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 146 | 29.26 | radiation | 40.0 | 270 | < th | dose independent | rect. | 2 | 5 |
| 147 | 29.26 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 149 | 29.27 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 5 |
| 151 | 29.27 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 161 | 29.31 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 8 | 20 |
| 162 | 29.31 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 8 | 20 |
| 166 | 29.32 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 2 | 6 |
| 167 | 29.32 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 16 | 16 |
| 187 | 29.40 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 19 |
| 191 | 29.42 | wind | 7.0 | 90 | < th | dose independent | rect. | 9 | 18 |
| 192 | 29.42 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 9 | 18 |
| 193 | 29.42 | wind | 7.0 | 30 | < th | dose independent | rect. | 8 | 20 |
| 195 | 29.42 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 9 | 18 |
| 198 | 29.44 | wind | 5.0 | 30 | < th | dose independent | rect. | 4 | 4 |
| 204 | 29.46 | wind | 9.0 | 90 | < th | dose dependent | rect. | 9 | 18 |
| 205 | 29.47 | wind | 5.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 236 | 29.55 | temperature | 10.0 | 90 | > th | dose independent | rect. | 9 | 18 |
| 240 | 29.56 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 4 |
| 242 | 29.56 | temperature | 30.0 | 30 | < th | dose independent | rect. | 4 | 4 |
| 243 | 29.56 | humidity | 50.0 | 30 | > th | dose independent | rect. | 4 | 4 |
| 245 | 29.56 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 4 | 4 |
| 246 | 29.56 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 4 | 4 |
| 248 | 29.56 | temperature | 10.0 | 30 | > th | dose independent | rect. | 8 | 20 |
| 270 | 29.60 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 4 |
| 274 | 29.60 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 4 |
| 286 | 29.63 | radiation | 40.0 | 30 | < th | dose independent | rect. | 4 | 4 |
| 327 | 29.68 | temperature | 25.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 340 | 29.69 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 1 |
| 350 | 29.69 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 353 | 29.70 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 356 | 29.70 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 359 | 29.70 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 360 | 29.70 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 362 | 29.70 | radiation | 20.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 373 | 29.71 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 385 | 29.73 | radiation | 1.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 518 | 29.89 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 5 | 4 |
| 573 | 30.03 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 21 | 7 |
| 608 | 30.09 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 19 | 9 |
| 630 | 30.15 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 4 | 4 |
| 632 | 30.15 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 641 | 30.18 | wind | 9.0 | 14400 | < th | dose independent | rect. | 5 | 4 |
| 647 | 30.19 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 653 | 30.20 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 20 | 8 |
| 693 | 30.27 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 8 | 7 |
| 694 | 30.27 | radiation | 40.0 | 90 | < th | dose independent | rect. | 15 | 17 |
| 697 | 30.27 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 8 | 7 |
| 698 | 30.28 | wind | 9.0 | 90 | < th | dose independent | rect. | 15 | 17 |
| 704 | 30.29 | temperature | 10.0 | 90 | > th | dose independent | rect. | 8 | 7 |
| 705 | 30.29 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 8 | 7 |
| 706 | 30.29 | temperature | 15.0 | 270 | > th | dose independent | rect. | 12 | 10 |
| 759 | 30.36 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 8 | 7 |
| 768 | 30.38 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 8 | 20 |
| 775 | 30.39 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 14 | 17 |
| 809 | 30.44 | wind | 9.0 | 90 | < th | dose independent | rect. | 8 | 7 |
| 812 | 30.45 | wind | 1.0 | 90 | > th | dose independent | rect. | 8 | 7 |
| 820 | 30.46 | radiation | 1.0 | 90 | > th | dose independent | rect. | 8 | 7 |
| 904 | 30.60 | wind | 7.0 | 270 | < th | dose independent | rect. | 18 | 9 |
| 910 | 30.60 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 21 | 5 |
| 914 | 30.60 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 8 | 19 |
| 916 | 30.61 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 9 | 18 |
| 946 | 30.68 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 15 | 17 |
| 970 | 30.74 | temperature | 15.0 | 270 | > th | dose independent | rect. | 3 | 16 |
| 984 | 30.76 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 15 | 12 |
| 992 | 30.78 | radiation | 1.0 | 10 | < th | dose dependent | sin | 11 | NA |