Os03g0609500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to LOB domain protein 39.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0609500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to LOB domain protein 39.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 245.02 | 0.735 | 7.44 | -2.2 | 0.73 | -1.65 | -3.67 | -0.555 | 0.359 | 4.49 | 3.729 | 835 | -- | -- |
| 245.27 | 0.729 | 7.45 | -2.2 | 0.737 | -1.67 | -3.73 | -- | 0.352 | 4.37 | 3.742 | 849 | -- | -- |
| 275 | 0.772 | 7.4 | -2.2 | 0.826 | -1.64 | -- | -1.61 | 0.366 | 5.92 | 4.3 | 868 | -- | -- |
| 278.76 | 0.778 | 7.43 | -2.11 | 0.766 | -1.5 | -- | -- | 0.355 | 5.92 | 4.2 | 835 | -- | -- |
| 296.69 | 0.802 | 7.41 | -2.15 | -- | -1.7 | -- | -0.923 | 0.424 | -- | 4.196 | 596 | -- | -- |
| 293.32 | 0.803 | 7.44 | -1.71 | 0.99 | -- | -3.38 | -- | 0.321 | 6.14 | -- | -- | -- | -- |
| 310.69 | 0.825 | 7.42 | -1.73 | 1.05 | -- | -- | -- | 0.339 | 7.68 | -- | -- | -- | -- |
| 294.95 | 0.8 | 7.42 | -2.02 | -- | -1.49 | -- | -- | 0.424 | -- | 3.7 | 562 | -- | -- |
| 384 | 0.913 | 7.38 | -- | 0.909 | -0.551 | -- | -- | 0.567 | 7.21 | 4.199 | 835 | -- | -- |
| 370.48 | 0.899 | 7.45 | -1.72 | -- | -- | -- | -- | 0.355 | -- | -- | -- | -- | -- |
| 389.68 | 0.923 | 7.38 | -- | 1.04 | -- | -- | -- | 0.532 | 7.79 | -- | -- | -- | -- |
| 406.13 | 0.939 | 7.4 | -- | -- | -1.07 | -- | -- | 0.598 | -- | 3.6 | 554 | -- | -- |
| 448.26 | 0.988 | 7.41 | -- | -- | -- | -- | -- | 0.545 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 234.02 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 18 |
| 2 | 234.46 | wind | 7.0 | 30 | < th | dose dependent | rect. | 6 | 7 |
| 3 | 234.63 | wind | 5.0 | 30 | < th | dose independent | rect. | 6 | 14 |
| 6 | 235.73 | wind | 9.0 | 30 | < th | dose dependent | rect. | 6 | 14 |
| 9 | 235.98 | wind | 5.0 | 30 | < th | dose independent | rect. | 6 | 7 |
| 18 | 237.83 | wind | 9.0 | 270 | < th | dose dependent | rect. | 5 | 16 |
| 19 | 237.86 | wind | 5.0 | 90 | < th | dose independent | rect. | 6 | 17 |
| 29 | 238.51 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 8 |
| 39 | 238.89 | wind | 5.0 | 270 | < th | dose independent | rect. | 4 | 17 |
| 43 | 239.10 | wind | 5.0 | 270 | < th | dose independent | rect. | 3 | 19 |
| 69 | 240.56 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 3 | 7 |
| 88 | 241.28 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 6 | 6 |
| 120 | 242.17 | humidity | 90.0 | 10 | < th | dose independent | rect. | 2 | 10 |
| 138 | 242.56 | temperature | 20.0 | 270 | > th | dose independent | rect. | 5 | 16 |
| 182 | 243.56 | wind | 5.0 | 720 | < th | dose independent | rect. | 21 | 19 |
| 185 | 243.62 | wind | 5.0 | 720 | < th | dose independent | rect. | 19 | 20 |
| 235 | 244.45 | temperature | 20.0 | 10 | > th | dose independent | rect. | 6 | 6 |
| 239 | 244.59 | radiation | 1.0 | 90 | > th | dose independent | sin | 7 | NA |
| 241 | 244.61 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 6 | 14 |
| 293 | 245.43 | wind | 3.0 | 720 | > th | dose independent | rect. | 4 | 19 |
| 316 | 245.77 | humidity | 50.0 | 10 | > th | dose independent | rect. | 6 | 6 |
| 317 | 245.77 | wind | 9.0 | 10 | < th | dose dependent | rect. | 6 | 18 |
| 344 | 246.14 | temperature | 20.0 | 270 | > th | dose independent | rect. | 4 | 6 |
| 353 | 246.21 | temperature | 25.0 | 30 | > th | dose independent | rect. | 4 | 8 |
| 383 | 246.50 | temperature | 20.0 | 10 | > th | dose independent | rect. | 6 | 14 |
| 384 | 246.52 | humidity | 90.0 | 10 | < th | dose independent | sin | 4 | NA |
| 385 | 246.52 | radiation | 1.0 | 90 | < th | dose independent | sin | 7 | NA |
| 429 | 246.91 | wind | 1.0 | 720 | > th | dose dependent | rect. | 4 | 19 |
| 430 | 246.92 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 12 | 18 |
| 438 | 246.97 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 12 | 18 |
| 439 | 246.97 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 12 | 18 |
| 441 | 246.99 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 6 | 6 |
| 444 | 247.05 | temperature | 10.0 | 10 | > th | dose independent | rect. | 6 | 6 |
| 446 | 247.05 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 6 | 6 |
| 447 | 247.05 | atmosphere | 1015.0 | 10 | < th | dose independent | rect. | 6 | 6 |
| 448 | 247.05 | temperature | 10.0 | 10 | > th | dose independent | rect. | 12 | 18 |
| 451 | 247.07 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 6 | 6 |
| 452 | 247.07 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 6 | 6 |
| 465 | 247.23 | temperature | 20.0 | 270 | > th | dose independent | rect. | 5 | 4 |
| 474 | 247.28 | wind | 5.0 | 720 | < th | dose independent | rect. | 16 | 21 |
| 482 | 247.34 | radiation | 40.0 | 10 | < th | dose independent | rect. | 12 | 18 |
| 491 | 247.44 | wind | 5.0 | 720 | < th | dose independent | sin | 4 | NA |
| 516 | 247.64 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 20 | 10 |
| 532 | 247.71 | radiation | 1.0 | 90 | > th | dose independent | rect. | 4 | 8 |
| 546 | 247.74 | radiation | 1.0 | 10 | > th | dose independent | rect. | 6 | 6 |
| 562 | 247.86 | temperature | 20.0 | 10 | > th | dose independent | rect. | 6 | 17 |
| 564 | 247.89 | wind | 5.0 | 90 | < th | dose independent | sin | 23 | NA |
| 565 | 247.89 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 12 | 18 |
| 582 | 247.95 | radiation | 1.0 | 90 | < th | dose dependent | sin | 7 | NA |
| 587 | 248.00 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 24 | 6 |
| 588 | 248.00 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 24 | 6 |
| 599 | 248.02 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 606 | 248.07 | wind | 9.0 | 10 | < th | dose independent | rect. | 12 | 18 |
| 607 | 248.08 | wind | 7.0 | 720 | < th | dose dependent | sin | 3 | NA |
| 628 | 248.20 | wind | 9.0 | 720 | < th | dose dependent | rect. | 21 | 20 |
| 638 | 248.25 | wind | 7.0 | 720 | < th | dose dependent | rect. | 19 | 20 |
| 646 | 248.28 | wind | 9.0 | 720 | < th | dose dependent | rect. | 19 | 22 |
| 652 | 248.31 | wind | 5.0 | 720 | < th | dose dependent | rect. | 8 | 1 |
| 674 | 248.38 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 6 | 18 |
| 676 | 248.38 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 6 | 18 |
| 682 | 248.41 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 7 | 6 |
| 685 | 248.41 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 7 | 6 |
| 689 | 248.41 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 13 | 18 |
| 728 | 248.64 | humidity | 80.0 | 270 | > th | dose independent | rect. | 5 | 4 |
| 783 | 248.95 | wind | 5.0 | 720 | < th | dose independent | rect. | 1 | 14 |
| 808 | 249.03 | wind | 1.0 | 10 | > th | dose independent | rect. | 6 | 6 |
| 813 | 249.07 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 20 | 10 |
| 827 | 249.13 | humidity | 60.0 | 270 | > th | dose independent | rect. | 3 | 8 |
| 833 | 249.15 | radiation | 1.0 | 270 | < th | dose dependent | sin | 10 | NA |
| 841 | 249.21 | wind | 7.0 | 720 | < th | dose dependent | rect. | 16 | 21 |
| 853 | 249.31 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 24 | 6 |
| 867 | 249.38 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 21 | 14 |
| 878 | 249.44 | temperature | 25.0 | 30 | > th | dose independent | sin | 4 | NA |
| 889 | 249.48 | wind | 3.0 | 720 | > th | dose independent | rect. | 4 | 15 |
| 910 | 249.57 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 21 | 8 |
| 940 | 249.71 | radiation | 10.0 | 30 | < th | dose independent | rect. | 20 | 10 |
| 942 | 249.73 | humidity | 50.0 | 10 | > th | dose independent | rect. | 12 | 18 |
| 948 | 249.77 | radiation | 40.0 | 90 | < th | dose independent | rect. | 5 | 7 |
| 949 | 249.77 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 6 | 14 |
| 950 | 249.77 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 6 | 14 |