Os03g0604200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to UDP-glucose dehydrogenase.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0604200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to UDP-glucose dehydrogenase.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 93.12 | 0.453 | 3 | 0.325 | 0.0537 | -0.657 | -0.193 | 2.48 | 1.9 | 3.83 | 10.8 | 4524 | -- | -- |
| 95.63 | 0.455 | 2.98 | 0.123 | 0.0231 | -0.824 | -0.278 | -- | 1.88 | 0.863 | 10.81 | 4519 | -- | -- |
| 93.1 | 0.449 | 3 | 0.325 | 0.0641 | -0.669 | -- | 2.58 | 1.89 | 3.88 | 10.81 | 4511 | -- | -- |
| 95.71 | 0.456 | 2.98 | 0.0977 | 0.0735 | -0.842 | -- | -- | 1.88 | 5.22 | 10.82 | 4520 | -- | -- |
| 93.33 | 0.45 | 3 | 0.331 | -- | -0.674 | -- | 2.58 | 1.89 | -- | 10.81 | 4511 | -- | -- |
| 111.76 | 0.496 | 3.06 | 0.102 | 0.242 | -- | -0.458 | -- | 1.54 | 1.2 | -- | -- | -- | -- |
| 112.63 | 0.497 | 3.06 | 0.118 | 0.242 | -- | -- | -- | 1.54 | 1.15 | -- | -- | -- | -- |
| 95.93 | 0.456 | 2.98 | 0.1 | -- | -0.855 | -- | -- | 1.88 | -- | 10.8 | 4518 | -- | -- |
| 95.94 | 0.456 | 2.98 | -- | 0.0735 | -0.852 | -- | -- | 1.87 | 5.43 | 10.8 | 4520 | -- | -- |
| 116.26 | 0.504 | 3.06 | 0.128 | -- | -- | -- | -- | 1.55 | -- | -- | -- | -- | -- |
| 112.99 | 0.497 | 3.06 | -- | 0.244 | -- | -- | -- | 1.53 | 1.17 | -- | -- | -- | -- |
| 96.2 | 0.457 | 2.98 | -- | -- | -0.858 | -- | -- | 1.87 | -- | 10.8 | 4518 | -- | -- |
| 116.69 | 0.504 | 3.06 | -- | -- | -- | -- | -- | 1.54 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 89.74 | temperature | 25.0 | 90 | > th | dose independent | rect. | 22 | 7 |
| 10 | 92.71 | temperature | 25.0 | 10 | > th | dose independent | rect. | 22 | 7 |
| 17 | 93.75 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 21 | 9 |
| 23 | 94.26 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 22 | 7 |
| 49 | 95.77 | temperature | 25.0 | 270 | < th | dose independent | rect. | 18 | 13 |
| 87 | 97.43 | temperature | 25.0 | 270 | < th | dose independent | sin | 12 | NA |
| 91 | 97.55 | temperature | 25.0 | 270 | > th | dose independent | sin | 12 | NA |
| 122 | 98.38 | temperature | 25.0 | 10 | > th | dose independent | rect. | 22 | 4 |
| 125 | 98.41 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 13 | 1 |
| 197 | 99.31 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 24 | 5 |
| 212 | 99.50 | temperature | 25.0 | 720 | > th | dose independent | rect. | 16 | 10 |
| 259 | 100.01 | wind | 9.0 | 4320 | > th | dose independent | rect. | 13 | 1 |
| 281 | 100.28 | wind | 9.0 | 4320 | < th | dose independent | rect. | 13 | 1 |
| 305 | 100.50 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 23 | 2 |
| 337 | 100.77 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 22 | 1 |
| 355 | 100.99 | temperature | 25.0 | 720 | < th | dose independent | rect. | 17 | 9 |
| 426 | 101.38 | wind | 9.0 | 4320 | > th | dose independent | rect. | 13 | 3 |
| 456 | 101.55 | temperature | 25.0 | 10 | > th | dose independent | rect. | 18 | 11 |
| 462 | 101.59 | atmosphere | 1005.0 | 270 | > th | dose dependent | rect. | 24 | 1 |
| 516 | 101.87 | temperature | 25.0 | 720 | > th | dose independent | rect. | 17 | 2 |
| 527 | 101.91 | wind | 9.0 | 4320 | < th | dose independent | rect. | 13 | 3 |
| 541 | 101.99 | wind | 9.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 587 | 102.26 | radiation | 10.0 | 10 | > th | dose dependent | rect. | 17 | 14 |
| 588 | 102.27 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 11 | 8 |
| 590 | 102.27 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 11 | 8 |
| 620 | 102.47 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 624 | 102.48 | humidity | 50.0 | 720 | > th | dose independent | rect. | 19 | 16 |
| 629 | 102.51 | temperature | 10.0 | 720 | > th | dose independent | rect. | 11 | 8 |
| 630 | 102.51 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 11 | 8 |
| 632 | 102.51 | temperature | 10.0 | 720 | > th | dose independent | rect. | 19 | 16 |
| 633 | 102.51 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 19 | 16 |
| 653 | 102.62 | wind | 9.0 | 720 | < th | dose independent | rect. | 19 | 16 |
| 655 | 102.63 | radiation | 1.0 | 720 | > th | dose independent | rect. | 17 | 1 |
| 663 | 102.68 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 22 | 3 |
| 672 | 102.74 | wind | 9.0 | 30 | < th | dose independent | rect. | 1 | 23 |
| 674 | 102.75 | wind | 3.0 | 720 | < th | dose independent | rect. | 2 | 1 |
| 691 | 102.81 | radiation | 10.0 | 10 | > th | dose independent | rect. | 17 | 14 |
| 708 | 102.89 | temperature | 10.0 | 720 | > th | dose independent | rect. | 23 | 8 |
| 710 | 102.89 | humidity | 50.0 | 720 | > th | dose independent | rect. | 23 | 8 |
| 712 | 102.89 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 23 | 8 |
| 713 | 102.89 | radiation | 30.0 | 720 | < th | dose independent | rect. | 23 | 8 |
| 715 | 102.89 | temperature | 10.0 | 720 | > th | dose independent | rect. | 7 | 16 |
| 721 | 102.92 | wind | 9.0 | 720 | < th | dose independent | rect. | 23 | 8 |
| 754 | 103.04 | wind | 9.0 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 757 | 103.04 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 18 | 11 |
| 758 | 103.05 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 23 | 8 |
| 759 | 103.05 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 5 | 2 |
| 760 | 103.05 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 23 | 8 |
| 778 | 103.12 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 6 | 1 |
| 783 | 103.16 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 19 | 16 |
| 784 | 103.16 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 19 | 16 |
| 787 | 103.18 | humidity | 90.0 | 10 | < th | dose independent | rect. | 24 | 1 |
| 796 | 103.23 | wind | 3.0 | 720 | > th | dose independent | rect. | 2 | 2 |
| 828 | 103.35 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 835 | 103.35 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 845 | 103.35 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 1 | 1 |
| 846 | 103.35 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 867 | 103.35 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 2 | 23 |
| 870 | 103.35 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 885 | 103.37 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 24 | 1 |
| 917 | 103.46 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 24 | 1 |
| 924 | 103.47 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 24 | 5 |
| 935 | 103.51 | radiation | 10.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 965 | 103.51 | radiation | 10.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 991 | 103.52 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 1 | 1 |
| 992 | 103.52 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 24 | 1 |
| 995 | 103.52 | wind | 3.0 | 10 | < th | dose dependent | rect. | 6 | 1 |