Os03g0599400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0599400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 128.23 | 0.532 | 6 | -1.59 | 0.752 | -0.496 | 0.306 | 2.19 | -0.235 | 23.8 | 8.554 | 1442 | -- | -- |
| 137.24 | 0.546 | 6 | -1.34 | 0.7 | -0.414 | 0.374 | -- | -0.184 | 23.6 | 11.33 | 1428 | -- | -- |
| 128.51 | 0.528 | 6 | -1.61 | 0.776 | -0.517 | -- | 2.34 | -0.236 | 23.8 | 8.37 | 1458 | -- | -- |
| 136.48 | 0.544 | 5.99 | -1.39 | 0.59 | -0.493 | -- | -- | -0.183 | 24 | 40 | 1270 | -- | -- |
| 140.91 | 0.556 | 5.95 | -1.31 | -- | 0.585 | -- | 0.482 | -0.0622 | -- | 10 | 1231 | -- | -- |
| 142.35 | 0.559 | 5.97 | -1.3 | 0.717 | -- | 0.444 | -- | -0.0726 | 23.8 | -- | -- | -- | -- |
| 143.21 | 0.56 | 5.97 | -1.32 | 0.715 | -- | -- | -- | -0.0745 | 23.8 | -- | -- | -- | -- |
| 140.87 | 0.555 | 5.96 | -1.29 | -- | 0.721 | -- | -- | -0.0721 | -- | 30 | 1194 | -- | -- |
| 184.47 | 0.636 | 5.93 | -- | 0.338 | 0.494 | -- | -- | 0.072 | 23.2 | 40 | 1270 | -- | -- |
| 175.4 | 0.619 | 5.95 | -1.3 | -- | -- | -- | -- | -0.0654 | -- | -- | -- | -- | -- |
| 189.11 | 0.643 | 5.94 | -- | 0.699 | -- | -- | -- | 0.0725 | 23.7 | -- | -- | -- | -- |
| 184.52 | 0.635 | 5.92 | -- | -- | 0.729 | -- | -- | 0.0705 | -- | 30 | 1194 | -- | -- |
| 219.88 | 0.692 | 5.92 | -- | -- | -- | -- | -- | 0.0787 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 119.70 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 4 | 5 |
| 3 | 120.25 | wind | 9.0 | 30 | < th | dose dependent | rect. | 4 | 16 |
| 4 | 120.36 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 4 | 5 |
| 9 | 121.30 | wind | 3.0 | 30 | < th | dose independent | rect. | 4 | 5 |
| 12 | 121.45 | wind | 7.0 | 30 | < th | dose dependent | rect. | 4 | 5 |
| 19 | 122.03 | atmosphere | 1000.0 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 25 | 122.52 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 9 | 19 |
| 28 | 122.60 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 4 | 5 |
| 32 | 122.91 | wind | 5.0 | 30 | < th | dose dependent | rect. | 4 | 8 |
| 34 | 122.98 | atmosphere | 1005.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 39 | 123.06 | humidity | 60.0 | 30 | > th | dose dependent | rect. | 20 | 8 |
| 48 | 123.34 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 5 |
| 49 | 123.34 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 5 |
| 51 | 123.39 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 5 |
| 53 | 123.39 | temperature | 30.0 | 30 | < th | dose independent | rect. | 4 | 5 |
| 54 | 123.39 | humidity | 50.0 | 30 | > th | dose independent | rect. | 4 | 5 |
| 56 | 123.39 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 4 | 5 |
| 57 | 123.39 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 4 | 5 |
| 58 | 123.39 | temperature | 10.0 | 30 | > th | dose independent | rect. | 9 | 19 |
| 63 | 123.52 | radiation | 40.0 | 30 | < th | dose independent | rect. | 4 | 5 |
| 64 | 123.55 | wind | 9.0 | 30 | < th | dose dependent | rect. | 4 | 14 |
| 67 | 123.63 | wind | 7.0 | 30 | < th | dose independent | rect. | 4 | 16 |
| 68 | 123.65 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 4 | 5 |
| 72 | 123.77 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 20 | 8 |
| 74 | 123.79 | wind | 9.0 | 30 | < th | dose dependent | rect. | 20 | 8 |
| 75 | 123.79 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 9 | 19 |
| 79 | 123.87 | wind | 7.0 | 30 | < th | dose dependent | rect. | 4 | 12 |
| 83 | 123.94 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 4 | 5 |
| 93 | 124.09 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 9 | 19 |
| 94 | 124.09 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 9 | 19 |
| 114 | 124.25 | wind | 3.0 | 30 | < th | dose independent | rect. | 4 | 16 |
| 138 | 124.43 | wind | 9.0 | 30 | < th | dose independent | rect. | 9 | 19 |
| 140 | 124.44 | wind | 3.0 | 30 | < th | dose independent | rect. | 4 | 3 |
| 141 | 124.44 | wind | 5.0 | 30 | < th | dose dependent | rect. | 4 | 3 |
| 153 | 124.67 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 16 |
| 155 | 124.67 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 16 |
| 156 | 124.68 | wind | 9.0 | 30 | < th | dose independent | rect. | 20 | 8 |
| 157 | 124.69 | temperature | 10.0 | 30 | > th | dose independent | rect. | 20 | 8 |
| 158 | 124.69 | temperature | 30.0 | 30 | < th | dose independent | rect. | 20 | 8 |
| 159 | 124.69 | humidity | 50.0 | 30 | > th | dose independent | rect. | 20 | 8 |
| 162 | 124.69 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 20 | 8 |
| 163 | 124.69 | radiation | 1.0 | 30 | < th | dose independent | rect. | 20 | 8 |
| 168 | 124.69 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 16 |
| 170 | 124.69 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 4 | 16 |
| 171 | 124.69 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 20 | 8 |
| 190 | 124.88 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 4 | 16 |
| 192 | 124.89 | humidity | 90.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 212 | 125.08 | wind | 3.0 | 30 | < th | dose independent | rect. | 4 | 8 |
| 214 | 125.10 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 9 | 19 |
| 223 | 125.19 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 20 | 8 |
| 224 | 125.19 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 226 | 125.19 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 20 | 8 |
| 232 | 125.29 | wind | 5.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 241 | 125.35 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 20 | 8 |
| 252 | 125.44 | wind | 9.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 264 | 125.55 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 15 | 4 |
| 294 | 125.63 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 15 | 2 |
| 323 | 125.78 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 7 | 21 |
| 339 | 125.89 | humidity | 60.0 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 352 | 125.97 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 1 |
| 355 | 125.97 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 360 | 126.00 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 4 | 3 |
| 367 | 126.04 | wind | 3.0 | 30 | < th | dose independent | rect. | 4 | 12 |
| 373 | 126.07 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 393 | 126.22 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 395 | 126.22 | temperature | 30.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 396 | 126.22 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 399 | 126.22 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 1 |
| 400 | 126.22 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 402 | 126.22 | radiation | 20.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 406 | 126.22 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 23 |
| 408 | 126.24 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 4 | 1 |
| 415 | 126.28 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 4 | 3 |
| 424 | 126.32 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 8 | 22 |
| 428 | 126.34 | radiation | 1.0 | 270 | < th | dose independent | rect. | 4 | 1 |
| 479 | 126.51 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 8 | 11 |
| 483 | 126.52 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 8 | 17 |
| 490 | 126.54 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 8 | 14 |
| 498 | 126.58 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 4 | 3 |
| 506 | 126.66 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 4 | 3 |
| 509 | 126.66 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 4 | 3 |
| 521 | 126.73 | temperature | 10.0 | 30 | > th | dose independent | rect. | 4 | 3 |
| 523 | 126.73 | temperature | 30.0 | 30 | < th | dose independent | rect. | 4 | 3 |
| 524 | 126.73 | humidity | 50.0 | 30 | > th | dose independent | rect. | 4 | 3 |
| 527 | 126.73 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 4 | 3 |
| 528 | 126.73 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 4 | 3 |
| 529 | 126.73 | radiation | 20.0 | 30 | < th | dose independent | rect. | 4 | 3 |
| 532 | 126.73 | temperature | 10.0 | 30 | > th | dose independent | rect. | 7 | 21 |
| 536 | 126.74 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 8 | 9 |
| 543 | 126.79 | radiation | 10.0 | 1440 | < th | dose dependent | sin | 22 | NA |
| 547 | 126.81 | wind | 9.0 | 14400 | > th | dose dependent | sin | 14 | NA |
| 551 | 126.83 | humidity | 50.0 | 30 | > th | dose independent | rect. | 9 | 19 |
| 580 | 126.86 | humidity | 60.0 | 30 | > th | dose dependent | rect. | 18 | 10 |
| 585 | 126.90 | wind | 7.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 589 | 126.90 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 14 | 7 |
| 593 | 126.91 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 7 | 21 |
| 608 | 126.97 | wind | 7.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 609 | 126.97 | wind | 7.0 | 43200 | > th | dose independent | rect. | 15 | 4 |
| 610 | 126.97 | humidity | 50.0 | 30 | > th | dose independent | rect. | 4 | 16 |
| 632 | 127.06 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 9 | 19 |
| 640 | 127.10 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 15 | 13 |
| 641 | 127.10 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 15 | 22 |
| 648 | 127.12 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 669 | 127.17 | radiation | 40.0 | 30 | < th | dose dependent | rect. | 4 | 3 |
| 693 | 127.24 | radiation | 10.0 | 1440 | < th | dose dependent | rect. | 9 | 6 |
| 710 | 127.27 | wind | 7.0 | 43200 | < th | dose independent | rect. | 15 | 3 |
| 712 | 127.27 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 16 | 2 |
| 729 | 127.30 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 17 | 20 |
| 732 | 127.31 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 746 | 127.34 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 7 | 21 |
| 751 | 127.34 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 7 | 21 |
| 774 | 127.39 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 14 | 4 |
| 782 | 127.42 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 791 | 127.43 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 23 | 9 |
| 817 | 127.48 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 852 | 127.54 | temperature | 30.0 | 10 | < th | dose independent | rect. | 4 | 16 |
| 894 | 127.61 | atmosphere | 1000.0 | 14400 | > th | dose dependent | sin | 8 | NA |
| 913 | 127.62 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 970 | 127.66 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 973 | 127.66 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 5 | 5 |
| 974 | 127.66 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 5 | 5 |
| 976 | 127.66 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 10 | 19 |