Os03g0598700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, RING-type domain containing protein.
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Os03g0598700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, RING-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 68.87 | 0.39 | 6.38 | 1.13 | 0.0696 | -0.214 | -0.696 | -2.43 | 0.457 | 12.2 | 1000 | 9451 | -- | -- |
| 70.32 | 0.391 | 6.36 | 1.29 | 0.0367 | -0.613 | -0.77 | -- | 0.453 | 11.4 | 999.9 | 11442 | -- | -- |
| 70.23 | 0.39 | 6.38 | 1.11 | 0.113 | -0.217 | -- | -2.63 | 0.459 | 15.9 | 998.7 | 8813 | -- | -- |
| 71.91 | 0.395 | 6.36 | 1.24 | 0.112 | -0.634 | -- | -- | 0.439 | 15.8 | 999.8 | 11437 | -- | -- |
| 71.03 | 0.393 | 6.38 | 1.1 | -- | -0.212 | -- | -2.61 | 0.456 | -- | 999 | 8642 | -- | -- |
| 79.41 | 0.418 | 6.35 | 1.14 | 0.0626 | -- | -0.707 | -- | 0.493 | 12.2 | -- | -- | -- | -- |
| 81.12 | 0.422 | 6.35 | 1.12 | 0.115 | -- | -- | -- | 0.491 | 15.8 | -- | -- | -- | -- |
| 72.75 | 0.397 | 6.36 | 1.24 | -- | -0.632 | -- | -- | 0.429 | -- | 999.9 | 11441 | -- | -- |
| 110.48 | 0.49 | 6.39 | -- | 0.0975 | -0.416 | -- | -- | 0.323 | 15.7 | 1000 | 9144 | -- | -- |
| 81.84 | 0.423 | 6.35 | 1.11 | -- | -- | -- | -- | 0.488 | -- | -- | -- | -- | -- |
| 113.97 | 0.499 | 6.38 | -- | 0.0932 | -- | -- | -- | 0.367 | 16 | -- | -- | -- | -- |
| 111.01 | 0.491 | 6.39 | -- | -- | -0.413 | -- | -- | 0.321 | -- | 1000 | 9144 | -- | -- |
| 114.44 | 0.499 | 6.38 | -- | -- | -- | -- | -- | 0.365 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 68.17 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 19 | 2 |
| 2 | 68.21 | wind | 9.0 | 4320 | > th | dose independent | rect. | 19 | 2 |
| 3 | 68.21 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 19 | 4 |
| 4 | 68.22 | wind | 9.0 | 4320 | < th | dose independent | rect. | 20 | 2 |
| 10 | 68.35 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 19 | 7 |
| 17 | 68.41 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 23 | 68.45 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 24 | 68.46 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 28 | 68.48 | wind | 9.0 | 4320 | > th | dose dependent | sin | 15 | NA |
| 30 | 68.51 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 31 | 68.51 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 33 | 68.53 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 34 | 68.53 | wind | 9.0 | 4320 | < th | dose independent | rect. | 20 | 7 |
| 35 | 68.53 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 40 | 68.62 | wind | 9.0 | 4320 | > th | dose independent | rect. | 19 | 7 |
| 44 | 68.64 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 51 | 68.71 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 2 | 1 |
| 58 | 68.76 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 8 | 5 |
| 62 | 68.80 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 63 | 68.80 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 21 | 19 |
| 69 | 68.82 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 1 | 3 |
| 72 | 68.83 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 23 | 16 |
| 73 | 68.83 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 21 | 19 |
| 82 | 68.85 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 2 | 13 |
| 98 | 68.89 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 3 | 13 |
| 107 | 68.91 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 2 | 15 |
| 108 | 68.92 | atmosphere | 995.0 | 14400 | > th | dose independent | sin | 5 | NA |
| 109 | 68.92 | atmosphere | 995.0 | 14400 | < th | dose independent | sin | 4 | NA |
| 114 | 68.92 | atmosphere | 995.0 | 14400 | < th | dose dependent | sin | 2 | NA |
| 143 | 68.98 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 8 | 7 |
| 150 | 68.99 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 10 | 5 |
| 151 | 68.99 | atmosphere | 1000.0 | 4320 | < th | dose independent | rect. | 11 | 5 |
| 156 | 69.00 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 157 | 69.00 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 3 |
| 177 | 69.00 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 14 | 12 |
| 195 | 69.01 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 214 | 69.01 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 275 | 69.05 | atmosphere | 995.0 | 14400 | < th | dose dependent | sin | 17 | NA |
| 314 | 69.08 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 324 | 69.08 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 343 | 69.09 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 13 | 15 |
| 389 | 69.11 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 13 | 13 |
| 411 | 69.12 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 13 | 11 |
| 416 | 69.13 | atmosphere | 1000.0 | 4320 | < th | dose independent | rect. | 10 | 11 |
| 450 | 69.14 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 10 | 20 |
| 457 | 69.15 | atmosphere | 995.0 | 14400 | > th | dose independent | no | NA | NA |
| 470 | 69.15 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 12 | 17 |
| 495 | 69.15 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 14 | 23 |
| 527 | 69.16 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 2 | 23 |
| 587 | 69.18 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 14 | 16 |
| 638 | 69.19 | atmosphere | 995.0 | 14400 | < th | dose independent | no | NA | NA |
| 655 | 69.19 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 14 | 16 |
| 736 | 69.20 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 14 | 13 |
| 758 | 69.20 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 1 | 23 |
| 866 | 69.22 | atmosphere | 995.0 | 14400 | < th | dose dependent | no | NA | NA |
| 869 | 69.22 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 7 |