Os03g0589400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os03g0589400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 92.21 | 0.447 | 3.3 | 0.986 | 0.0902 | 38.6 | -0.593 | 187 | 0.00491 | 4.62 | 5 | 30 | 0 | 6 |
| 114.45 | 0.502 | 3.1 | 0.06 | 0.122 | -0.37 | -0.441 | -- | -7.91e-05 | 5.67 | 5 | 30 | 0 | 6 |
| 92.42 | 0.448 | 3.29 | 0.986 | 0.141 | 38.4 | -- | 186 | 0.00794 | 7.92 | 5.012 | 30 | 0.00698 | 6.04 |
| 114.76 | 0.499 | 3.1 | 0.0622 | 0.123 | -0.304 | -- | -- | 0.00565 | 6.23 | 4.6 | 71 | 0.117 | 5.52 |
| 93.51 | 0.45 | 3.3 | 0.985 | -- | 38.4 | -- | 186 | 0.011 | -- | 5.013 | 30 | 0.00987 | 6.05 |
| 114.74 | 0.502 | 3.1 | 0.0689 | 0.117 | -- | -0.398 | -- | 0.00385 | 5.83 | -- | -- | -- | -- |
| 115.04 | 0.502 | 3.1 | 0.0672 | 0.121 | -- | -- | -- | 0.00593 | 7.07 | -- | -- | -- | -- |
| 115.54 | 0.501 | 3.1 | 0.0661 | -- | -0.281 | -- | -- | 0.00849 | -- | 3.986 | 72 | 0.0317 | 5.72 |
| 114.75 | 0.499 | 3.1 | -- | 0.13 | -0.324 | -- | -- | -0.00529 | 6.67 | 3.6 | 71 | 0.698 | 5.95 |
| 115.81 | 0.503 | 3.1 | 0.0696 | -- | -- | -- | -- | 0.00812 | -- | -- | -- | -- | -- |
| 115.16 | 0.502 | 3.1 | -- | 0.122 | -- | -- | -- | -0.00156 | 7.04 | -- | -- | -- | -- |
| 115.64 | 0.502 | 3.1 | -- | -- | -0.259 | -- | -- | -0.00323 | -- | 3.6 | 71 | 0.698 | 5.95 |
| 115.94 | 0.503 | 3.1 | -- | -- | -- | -- | -- | 0.000394 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 92.21 | wind | 5.0 | 30 | > th | dose independent | rect. | 24 | 6 |
| 3 | 92.22 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 22 | 1 |
| 6 | 92.22 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 22 | 1 |
| 7 | 92.24 | wind | 5.0 | 30 | > th | dose dependent | rect. | 24 | 6 |
| 11 | 92.27 | wind | 5.0 | 30 | > th | dose independent | rect. | 24 | 4 |
| 13 | 92.27 | wind | 5.0 | 30 | > th | dose dependent | rect. | 24 | 4 |
| 19 | 92.40 | wind | 5.0 | 10 | > th | dose independent | rect. | 24 | 2 |
| 23 | 92.40 | wind | 5.0 | 10 | > th | dose dependent | rect. | 24 | 2 |
| 27 | 92.50 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 23 | 2 |
| 28 | 92.50 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 23 | 2 |
| 51 | 93.80 | wind | 5.0 | 10 | > th | dose dependent | rect. | 22 | 10 |
| 55 | 94.24 | wind | 5.0 | 10 | > th | dose dependent | rect. | 22 | 3 |
| 61 | 94.33 | wind | 5.0 | 10 | > th | dose dependent | rect. | 22 | 6 |
| 77 | 95.29 | wind | 5.0 | 10 | > th | dose independent | rect. | 22 | 10 |
| 83 | 95.90 | wind | 5.0 | 10 | > th | dose independent | rect. | 22 | 3 |
| 204 | 102.15 | wind | 5.0 | 10 | > th | dose independent | rect. | 20 | 5 |
| 228 | 103.31 | wind | 1.0 | 10 | < th | dose dependent | rect. | 24 | 3 |
| 240 | 103.46 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 1 | 2 |
| 241 | 103.47 | wind | 7.0 | 1440 | > th | dose independent | rect. | 1 | 2 |
| 254 | 103.60 | precipitation | 0.1 | 270 | < th | dose independent | sin | 14 | NA |
| 255 | 103.60 | precipitation | 0.1 | 270 | < th | dose dependent | sin | 14 | NA |
| 276 | 103.88 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 18 | 9 |
| 330 | 104.59 | precipitation | 0.1 | 270 | > th | dose independent | sin | 14 | NA |
| 343 | 104.78 | wind | 5.0 | 10 | < th | dose independent | sin | 10 | NA |
| 392 | 105.17 | wind | 5.0 | 10 | > th | dose independent | sin | 10 | NA |
| 410 | 105.30 | wind | 1.0 | 10 | < th | dose independent | rect. | 24 | 2 |
| 456 | 105.60 | wind | 1.0 | 10 | < th | dose dependent | rect. | 7 | 20 |
| 515 | 106.09 | precipitation | 0.1 | 270 | > th | dose dependent | sin | 13 | NA |
| 549 | 106.53 | wind | 5.0 | 10 | > th | dose dependent | sin | 10 | NA |
| 710 | 107.88 | atmosphere | 1005.0 | 720 | < th | dose independent | rect. | 21 | 2 |
| 763 | 108.24 | wind | 7.0 | 270 | > th | dose dependent | rect. | 20 | 2 |
| 805 | 108.44 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 5 | 3 |
| 823 | 108.49 | temperature | 20.0 | 270 | < th | dose independent | rect. | 2 | 7 |
| 859 | 108.64 | wind | 1.0 | 10 | < th | dose independent | rect. | 7 | 19 |
| 869 | 108.71 | wind | 1.0 | 10 | < th | dose dependent | sin | 17 | NA |
| 873 | 108.72 | temperature | 20.0 | 30 | < th | dose independent | rect. | 4 | 4 |
| 939 | 108.96 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 4 | 7 |
| 965 | 109.09 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 1 | 9 |
| 983 | 109.16 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 5 | 3 |
| 996 | 109.21 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 5 | 3 |