Os03g0587600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, CCHC-type domain containing protein.
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Os03g0587600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, CCHC-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 228.9 | 0.711 | 2.91 | -0.0952 | 0.0167 | 0.348 | 0.396 | -2.61 | -0.0662 | 12.5 | 2.431 | 15 | -- | -- |
| 233.36 | 0.711 | 2.9 | -0.0261 | 0.0366 | 0.499 | 0.885 | -- | -0.104 | 13.9 | 0.6767 | 59 | -- | -- |
| 229.39 | 0.711 | 2.92 | -0.0661 | 0.0027 | 0.3 | -- | -2.58 | -0.0628 | 0.0729 | 2.547 | 15 | -- | -- |
| 235.41 | 0.715 | 2.87 | 0.0172 | 0.00327 | 0.645 | -- | -- | -0.0153 | 13.3 | 0.7 | 53 | -- | -- |
| 229.39 | 0.709 | 2.92 | -0.0659 | -- | 0.3 | -- | -2.58 | -0.0628 | -- | 2.554 | 15 | -- | -- |
| 235.66 | 0.72 | 2.88 | 0.0156 | 0.065 | -- | -0.82 | -- | -0.0449 | 2.71 | -- | -- | -- | -- |
| 237.81 | 0.722 | 2.87 | 0.0354 | 0.0899 | -- | -- | -- | -0.0407 | 5.43 | -- | -- | -- | -- |
| 235.39 | 0.715 | 2.87 | -0.00111 | -- | 0.644 | -- | -- | -0.0172 | -- | 0.7 | 53 | -- | -- |
| 235.38 | 0.715 | 2.87 | -- | 0.0107 | 0.648 | -- | -- | -0.0165 | 12.5 | 0.6901 | 53 | -- | -- |
| 238.23 | 0.721 | 2.87 | 0.0384 | -- | -- | -- | -- | -0.0384 | -- | -- | -- | -- | -- |
| 237.84 | 0.721 | 2.87 | -- | 0.0905 | -- | -- | -- | -0.0446 | 5.41 | -- | -- | -- | -- |
| 235.39 | 0.715 | 2.87 | -- | -- | 0.644 | -- | -- | -0.0172 | -- | 0.7 | 53 | -- | -- |
| 238.27 | 0.72 | 2.87 | -- | -- | -- | -- | -- | -0.0427 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 221.20 | wind | 7 | 90 | > th | dose independent | rect. | 1 | 8 |
| 3 | 221.26 | wind | 7 | 90 | > th | dose dependent | rect. | 1 | 8 |
| 5 | 221.28 | wind | 7 | 90 | > th | dose independent | rect. | 7 | 2 |
| 8 | 221.29 | wind | 7 | 90 | > th | dose dependent | rect. | 7 | 2 |
| 17 | 221.78 | wind | 7 | 1440 | > th | dose independent | rect. | 3 | 2 |
| 20 | 221.81 | wind | 7 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 23 | 222.00 | wind | 7 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 29 | 222.16 | wind | 7 | 1440 | > th | dose independent | rect. | 1 | 4 |
| 45 | 223.26 | radiation | 40 | 10 | > th | dose independent | rect. | 13 | 2 |
| 65 | 223.49 | radiation | 10 | 10 | < th | dose dependent | rect. | 12 | 1 |
| 67 | 223.71 | radiation | 10 | 10 | < th | dose independent | rect. | 11 | 2 |
| 89 | 224.64 | temperature | 30 | 720 | > th | dose dependent | rect. | 8 | 1 |
| 110 | 225.07 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 7 | 1 |
| 117 | 225.07 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 126 | 225.12 | wind | 1 | 30 | < th | dose independent | rect. | 23 | 3 |
| 133 | 225.14 | wind | 1 | 30 | < th | dose dependent | rect. | 23 | 3 |
| 168 | 225.79 | humidity | 60 | 30 | < th | dose independent | rect. | 13 | 1 |
| 170 | 225.84 | wind | 1 | 10 | < th | dose dependent | rect. | 1 | 1 |
| 171 | 225.84 | temperature | 30 | 90 | > th | dose dependent | rect. | 12 | 1 |
| 175 | 225.91 | atmosphere | 995 | 10 | > th | dose independent | sin | 8 | NA |
| 183 | 226.14 | atmosphere | 1000 | 30 | < th | dose dependent | rect. | 7 | 6 |
| 193 | 226.31 | wind | 1 | 30 | < th | dose independent | rect. | 11 | 15 |
| 195 | 226.34 | temperature | 30 | 10 | > th | dose independent | rect. | 17 | 1 |
| 197 | 226.35 | wind | 1 | 30 | > th | dose independent | rect. | 21 | 23 |
| 199 | 226.36 | humidity | 70 | 30 | < th | dose independent | rect. | 18 | 1 |
| 202 | 226.37 | temperature | 25 | 10 | < th | dose dependent | rect. | 9 | 4 |
| 204 | 226.38 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 17 | 1 |
| 211 | 226.38 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 17 | 1 |
| 274 | 226.65 | temperature | 30 | 720 | > th | dose independent | rect. | 8 | 1 |
| 343 | 226.86 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 355 | 226.94 | temperature | 30 | 90 | > th | dose dependent | rect. | 17 | 2 |
| 387 | 226.98 | radiation | 10 | 90 | > th | dose dependent | rect. | 17 | 1 |
| 415 | 227.16 | wind | 1 | 30 | < th | dose dependent | rect. | 11 | 15 |
| 418 | 227.20 | wind | 1 | 10 | < th | dose independent | rect. | 6 | 1 |
| 426 | 227.25 | radiation | 10 | 90 | > th | dose independent | rect. | 17 | 1 |
| 483 | 227.37 | atmosphere | 995 | 10 | < th | dose independent | sin | 8 | NA |
| 484 | 227.37 | wind | 1 | 10 | < th | dose independent | rect. | 1 | 1 |
| 805 | 227.50 | atmosphere | 995 | 30 | < th | dose dependent | sin | 8 | NA |
| 841 | 227.64 | humidity | 70 | 720 | > th | dose independent | rect. | 8 | 1 |
| 845 | 227.67 | wind | 1 | 10 | < th | dose dependent | rect. | 6 | 20 |
| 852 | 227.80 | wind | 5 | 90 | > th | dose dependent | rect. | 22 | 12 |
| 854 | 227.82 | radiation | 40 | 10 | > th | dose dependent | rect. | 13 | 2 |
| 882 | 227.87 | wind | 1 | 270 | < th | dose dependent | rect. | 11 | 1 |
| 960 | 228.18 | wind | 1 | 30 | < th | dose independent | rect. | 6 | 20 |
| 984 | 228.25 | atmosphere | 995 | 10 | > th | dose independent | rect. | 21 | 23 |