Os03g0581800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os03g0581800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 17.27 | 0.195 | 13.1 | -0.591 | 0.396 | 0.101 | -0.131 | -0.787 | -0.181 | 19.5 | 20.5 | 2578 | -- | -- |
| 17.97 | 0.197 | 13 | -0.49 | 0.385 | 0.248 | -0.164 | -- | -0.153 | 19.5 | 19.6 | 6796 | -- | -- |
| 17.31 | 0.194 | 13.1 | -0.583 | 0.394 | 0.101 | -- | -0.808 | -0.178 | 19.5 | 20.5 | 2467 | -- | -- |
| 17.44 | 0.194 | 13 | -0.512 | 0.408 | 0.344 | -- | -- | -0.151 | 19.6 | 18.4 | 4253 | -- | -- |
| 25.59 | 0.236 | 13.1 | -0.58 | -- | 0.115 | -- | -0.781 | -0.181 | -- | 20.55 | 2311 | -- | -- |
| 19.45 | 0.207 | 13 | -0.323 | 0.394 | -- | -0.128 | -- | -0.0886 | 19.7 | -- | -- | -- | -- |
| 19.49 | 0.207 | 13 | -0.319 | 0.394 | -- | -- | -- | -0.0887 | 19.6 | -- | -- | -- | -- |
| 25.72 | 0.236 | 13 | -0.675 | -- | 0.435 | -- | -- | -0.197 | -- | 17.3 | 22467 | -- | -- |
| 21.1 | 0.214 | 13 | -- | 0.422 | -0.172 | -- | -- | -0.0156 | 19.7 | 22.05 | 47520 | -- | -- |
| 27.83 | 0.247 | 13 | -0.325 | -- | -- | -- | -- | -0.0946 | -- | -- | -- | -- | -- |
| 22.18 | 0.22 | 13 | -- | 0.397 | -- | -- | -- | -0.0531 | 19.6 | -- | -- | -- | -- |
| 29.42 | 0.253 | 13 | -- | -- | -0.162 | -- | -- | -0.00265 | -- | 22.1 | 47520 | -- | -- |
| 30.62 | 0.258 | 13 | -- | -- | -- | -- | -- | -0.0585 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 16.70 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 1 |
| 3 | 16.80 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 1 |
| 13 | 17.08 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 20 | 17.12 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 43 | 17.22 | temperature | 20 | 1440 | > th | dose independent | rect. | 14 | 15 |
| 44 | 17.22 | temperature | 20 | 1440 | < th | dose independent | rect. | 14 | 15 |
| 47 | 17.23 | radiation | 10 | 4320 | < th | dose independent | rect. | 17 | 13 |
| 77 | 17.26 | humidity | 80 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 78 | 17.26 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 81 | 17.27 | temperature | 20 | 1440 | > th | dose independent | sin | 15 | NA |
| 82 | 17.27 | radiation | 10 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 84 | 17.27 | radiation | 10 | 4320 | < th | dose independent | rect. | 17 | 8 |
| 98 | 17.28 | temperature | 20 | 1440 | < th | dose independent | sin | 14 | NA |
| 100 | 17.28 | humidity | 90 | 14400 | < th | dose independent | rect. | 23 | 2 |
| 102 | 17.28 | radiation | 10 | 4320 | < th | dose independent | rect. | 17 | 3 |
| 110 | 17.28 | temperature | 20 | 1440 | > th | dose independent | rect. | 15 | 11 |
| 132 | 17.29 | temperature | 20 | 1440 | < th | dose independent | rect. | 15 | 11 |
| 152 | 17.30 | humidity | 90 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 178 | 17.30 | temperature | 15 | 1440 | > th | dose dependent | rect. | 17 | 4 |
| 215 | 17.31 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 4 |
| 229 | 17.32 | humidity | 90 | 14400 | < th | dose independent | rect. | 23 | 8 |
| 276 | 17.33 | temperature | 15 | 1440 | > th | dose dependent | rect. | 19 | 1 |
| 294 | 17.33 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 10 | 14 |
| 299 | 17.34 | humidity | 70 | 43200 | > th | dose independent | rect. | 21 | 4 |
| 314 | 17.34 | atmosphere | 1005 | 14400 | > th | dose dependent | sin | 16 | NA |
| 318 | 17.34 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 368 | 17.35 | humidity | 90 | 14400 | < th | dose independent | rect. | 22 | 6 |
| 379 | 17.35 | atmosphere | 1005 | 14400 | > th | dose dependent | sin | 14 | NA |
| 435 | 17.36 | humidity | 70 | 43200 | < th | dose independent | rect. | 20 | 5 |
| 556 | 17.37 | atmosphere | 1005 | 14400 | > th | dose dependent | no | NA | NA |
| 707 | 17.38 | humidity | 70 | 43200 | < th | dose dependent | rect. | 20 | 8 |
| 759 | 17.38 | atmosphere | 1005 | 14400 | > th | dose dependent | rect. | 23 | 22 |
| 814 | 17.39 | humidity | 70 | 43200 | < th | dose dependent | rect. | 20 | 6 |
| 864 | 17.40 | humidity | 90 | 14400 | > th | dose independent | rect. | 22 | 9 |
| 963 | 17.41 | atmosphere | 1005 | 14400 | > th | dose dependent | sin | 7 | NA |
| 967 | 17.41 | temperature | 15 | 43200 | < th | dose dependent | rect. | 3 | 1 |