Os03g0565200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Haloacid dehalogenase-like hydrolase domain containing protein.
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Os03g0565200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Haloacid dehalogenase-like hydrolase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 728.73 | 1.27 | 7.95 | -2.15 | 1.39 | 1.55 | -0.459 | 8.68 | -1.82 | 8.8 | 27.89 | 1426 | 5.96 | -- |
| 788.9 | 1.31 | 7.94 | -2.34 | 1.55 | 2.05 | -0.633 | -- | -2.11 | 8.39 | 19.94 | 7696 | 5.87 | -- |
| 729.27 | 1.26 | 7.95 | -2.16 | 1.4 | 1.57 | -- | 8.68 | -1.82 | 8.82 | 27.89 | 1404 | 5.98 | -- |
| 766.43 | 1.29 | 8.15 | -2.12 | 1.37 | 2.27 | -- | -- | -2.53 | 8.25 | 10 | 7608 | 7.07 | -- |
| 837.58 | 1.35 | 7.99 | -2.12 | -- | 1.46 | -- | 8.54 | -1.8 | -- | 28.61 | 1460 | 6.03 | -- |
| 901.81 | 1.41 | 7.97 | -2.7 | 1.33 | -- | -0.528 | -- | -1.85 | 8.31 | -- | -- | -- | -- |
| 902.68 | 1.41 | 7.97 | -2.71 | 1.33 | -- | -- | -- | -1.85 | 8.29 | -- | -- | -- | -- |
| 868.36 | 1.37 | 8.19 | -2.14 | -- | 2.35 | -- | -- | -2.61 | -- | 9.982 | 8796 | 7.84 | -- |
| 832.26 | 1.34 | 8.12 | -- | 1.67 | 3.32 | -- | -- | -2.53 | 8.43 | -0.1131 | 9266 | 7.18 | -- |
| 1000.37 | 1.48 | 8.01 | -2.71 | -- | -- | -- | -- | -1.84 | -- | -- | -- | -- | -- |
| 1096.95 | 1.55 | 7.91 | -- | 1.32 | -- | -- | -- | -1.55 | 8.44 | -- | -- | -- | -- |
| 840.34 | 1.35 | 8.16 | -- | -- | 4.44 | -- | -- | -2.54 | -- | -38.17 | 8455 | 7.32 | -- |
| 1193.55 | 1.61 | 7.94 | -- | -- | -- | -- | -- | -1.54 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 664.62 | humidity | 50 | 14400 | > th | dose dependent | rect. | 12 | 7 |
| 2 | 664.76 | humidity | 70 | 14400 | > th | dose independent | rect. | 15 | 4 |
| 5 | 665.13 | humidity | 90 | 14400 | < th | dose dependent | rect. | 13 | 6 |
| 9 | 665.59 | humidity | 50 | 14400 | > th | dose dependent | rect. | 13 | 2 |
| 43 | 667.14 | humidity | 70 | 14400 | < th | dose independent | rect. | 15 | 3 |
| 59 | 667.70 | humidity | 70 | 14400 | > th | dose independent | rect. | 11 | 8 |
| 143 | 669.84 | humidity | 70 | 14400 | > th | dose independent | rect. | 11 | 13 |
| 159 | 669.95 | humidity | 70 | 14400 | > th | dose independent | rect. | 15 | 9 |
| 216 | 670.40 | humidity | 70 | 14400 | > th | dose independent | sin | 17 | NA |
| 267 | 671.41 | humidity | 50 | 14400 | > th | dose dependent | sin | 20 | NA |
| 277 | 671.60 | humidity | 90 | 14400 | < th | dose dependent | sin | 20 | NA |
| 482 | 674.35 | humidity | 70 | 14400 | < th | dose independent | sin | 16 | NA |
| 581 | 675.95 | humidity | 70 | 14400 | > th | dose independent | rect. | 23 | 20 |
| 582 | 675.96 | humidity | 70 | 14400 | > th | dose independent | rect. | 5 | 14 |
| 807 | 678.49 | humidity | 70 | 14400 | > th | dose independent | no | NA | NA |