Os03g0437600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Hydrolase.
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Os03g0437600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Hydrolase.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 14.45 | 0.179 | 14.3 | 0.00709 | 0.576 | -0.45 | 0.214 | 0.195 | -0.124 | 6.66 | 24.6 | 2693 | -- | -- |
| 14.48 | 0.177 | 14.3 | -0.0392 | 0.574 | -0.446 | 0.245 | -- | -0.132 | 6.68 | 24.77 | 2693 | -- | -- |
| 14.55 | 0.178 | 14.3 | 0.0221 | 0.569 | -0.455 | -- | 0.253 | -0.129 | 6.72 | 25.01 | 2675 | -- | -- |
| 14.57 | 0.178 | 14.3 | -0.0472 | 0.579 | -0.424 | -- | -- | -0.143 | 6.75 | 24.83 | 2702 | -- | -- |
| 19.45 | 0.205 | 14.3 | 0.0388 | -- | -0.846 | -- | 0.385 | -0.0604 | -- | 23.52 | 561 | -- | -- |
| 21.55 | 0.218 | 14.3 | -0.198 | 0.571 | -- | 0.0847 | -- | -0.185 | 7.16 | -- | -- | -- | -- |
| 21.56 | 0.217 | 14.3 | -0.196 | 0.571 | -- | -- | -- | -0.186 | 7.18 | -- | -- | -- | -- |
| 19.63 | 0.206 | 14.3 | -0.015 | -- | -0.825 | -- | -- | -0.0722 | -- | 23.5 | 563 | -- | -- |
| 14.62 | 0.178 | 14.3 | -- | 0.578 | -0.436 | -- | -- | -0.133 | 6.74 | 24.62 | 2701 | -- | -- |
| 38.83 | 0.291 | 14.3 | -0.185 | -- | -- | -- | -- | -0.176 | -- | -- | -- | -- | -- |
| 22.58 | 0.222 | 14.3 | -- | 0.569 | -- | -- | -- | -0.164 | 7.2 | -- | -- | -- | -- |
| 19.63 | 0.206 | 14.3 | -- | -- | -0.826 | -- | -- | -0.0699 | -- | 23.49 | 565 | -- | -- |
| 39.73 | 0.294 | 14.3 | -- | -- | -- | -- | -- | -0.155 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 14.21 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 18 | 12 |
| 2 | 14.23 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 17 | 13 |
| 3 | 14.26 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 4 | 14.27 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 5 | 14.29 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 22 | 14.33 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 18 | 4 |
| 29 | 14.36 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 44 | 14.40 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 17 | 12 |
| 63 | 14.43 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 18 | 12 |
| 68 | 14.44 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 23 | 22 |
| 71 | 14.45 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 76 | 14.46 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 9 | 16 |
| 103 | 14.51 | radiation | 10.0 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 117 | 14.52 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 19 | 20 |
| 140 | 14.53 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 8 | 21 |
| 149 | 14.54 | temperature | 25.0 | 14400 | > th | dose dependent | sin | 12 | NA |
| 152 | 14.54 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 8 | 13 |
| 178 | 14.54 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 185 | 14.55 | temperature | 25.0 | 1440 | > th | dose dependent | no | NA | NA |
| 191 | 14.55 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 7 | 16 |
| 193 | 14.55 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 2 | 20 |
| 202 | 14.55 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 23 | 22 |
| 219 | 14.56 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 5 | 16 |
| 270 | 14.57 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 22 | NA |
| 274 | 14.57 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 9 | 6 |
| 279 | 14.57 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 16 | 14 |
| 280 | 14.57 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 14 |
| 282 | 14.57 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 23 | 17 |
| 316 | 14.58 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 1 | 15 |
| 344 | 14.59 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 9 |
| 347 | 14.59 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 3 | 12 |
| 402 | 14.60 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 7 | 14 |
| 410 | 14.61 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 13 | 1 |
| 437 | 14.62 | temperature | 20.0 | 43200 | > th | dose independent | sin | 17 | NA |
| 438 | 14.62 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 451 | 14.62 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 460 | 14.62 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 21 | 9 |
| 469 | 14.62 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 19 | 21 |
| 472 | 14.63 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 513 | 14.64 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 7 |
| 526 | 14.65 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 554 | 14.66 | temperature | 30.0 | 1440 | > th | dose independent | rect. | 13 | 1 |
| 567 | 14.66 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 568 | 14.66 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 5 | 1 |
| 570 | 14.66 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 24 | 6 |
| 580 | 14.66 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 2 | 16 |
| 625 | 14.68 | temperature | 20.0 | 43200 | < th | dose independent | sin | 16 | NA |
| 676 | 14.69 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 17 | 10 |
| 685 | 14.70 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 16 | 2 |
| 695 | 14.70 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 22 | 8 |
| 724 | 14.70 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 2 | 4 |
| 740 | 14.71 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 24 | 6 |
| 803 | 14.73 | temperature | 25.0 | 14400 | < th | dose independent | sin | 11 | NA |
| 845 | 14.74 | temperature | 25.0 | 14400 | > th | dose independent | sin | 11 | NA |
| 848 | 14.74 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 857 | 14.74 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 9 |
| 900 | 14.75 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 2 | 4 |
| 904 | 14.75 | radiation | 1.0 | 14400 | < th | dose independent | rect. | 18 | 7 |
| 919 | 14.75 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 972 | 14.76 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 985 | 14.76 | temperature | 25.0 | 43200 | < th | dose dependent | rect. | 10 | 10 |