Os03g0432900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0432900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.9 | 0.21 | 12.8 | -0.247 | 0.243 | -0.961 | -0.685 | 0.809 | 0.166 | 22.8 | 20.08 | 252 | -- | -- |
| 20.29 | 0.21 | 12.8 | -0.396 | 0.252 | -0.936 | -0.763 | -- | 0.126 | 23 | 19.06 | 265 | -- | -- |
| 21.76 | 0.217 | 12.8 | -0.177 | 0.227 | -0.964 | -- | 1.05 | 0.177 | 23.3 | 19.92 | 225 | -- | -- |
| 22.4 | 0.22 | 12.8 | -0.365 | 0.326 | -0.933 | -- | -- | 0.122 | 23.4 | 18.39 | 369 | -- | -- |
| 23.3 | 0.225 | 12.8 | -0.134 | -- | -1.06 | -- | 1.26 | 0.194 | -- | 20.06 | 120 | -- | -- |
| 34.79 | 0.277 | 12.8 | -0.596 | 0.457 | -- | -0.487 | -- | -0.0362 | 2.18 | -- | -- | -- | -- |
| 35.61 | 0.279 | 12.8 | -0.583 | 0.461 | -- | -- | -- | -0.0338 | 2.48 | -- | -- | -- | -- |
| 24.75 | 0.232 | 12.8 | -0.346 | -- | -1.06 | -- | -- | 0.141 | -- | 18.38 | 41 | -- | -- |
| 24.24 | 0.229 | 12.8 | -- | 0.598 | -0.912 | -- | -- | 0.178 | 1.71 | 18.1 | 1064 | -- | -- |
| 48.1 | 0.324 | 12.8 | -0.563 | -- | -- | -- | -- | -0.0224 | -- | -- | -- | -- | -- |
| 44.56 | 0.312 | 12.8 | -- | 0.449 | -- | -- | -- | 0.0311 | 2.46 | -- | -- | -- | -- |
| 27.29 | 0.243 | 12.8 | -- | -- | -1.19 | -- | -- | 0.193 | -- | 17.5 | 100 | -- | -- |
| 56.47 | 0.351 | 12.8 | -- | -- | -- | -- | -- | 0.0401 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 19.77 | temperature | 20 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 4 | 19.88 | temperature | 20 | 720 | > th | dose dependent | rect. | 22 | 20 |
| 7 | 19.92 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 11 | 19.95 | temperature | 20 | 270 | > th | dose dependent | rect. | 22 | 23 |
| 58 | 20.39 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 4 |
| 107 | 20.57 | temperature | 20 | 270 | > th | dose dependent | rect. | 10 | 23 |
| 110 | 20.58 | temperature | 20 | 720 | > th | dose dependent | sin | 4 | NA |
| 120 | 20.62 | temperature | 20 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 134 | 20.65 | temperature | 20 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 162 | 20.73 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 16 |
| 176 | 20.75 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 15 |
| 205 | 20.80 | temperature | 20 | 1440 | > th | dose dependent | sin | 7 | NA |
| 293 | 20.93 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 20 |
| 326 | 20.98 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 22 |
| 327 | 20.98 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 22 |
| 332 | 20.99 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 22 |
| 422 | 21.11 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 17 |
| 495 | 21.17 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 511 | 21.17 | temperature | 30 | 270 | < th | dose dependent | rect. | 11 | 23 |
| 530 | 21.18 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 23 |
| 533 | 21.19 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 5 |
| 778 | 21.31 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 10 |
| 806 | 21.32 | temperature | 30 | 1440 | < th | dose dependent | sin | 8 | NA |
| 808 | 21.32 | temperature | 20 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 809 | 21.32 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 5 |
| 810 | 21.32 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 7 |
| 853 | 21.33 | temperature | 30 | 720 | < th | dose dependent | rect. | 8 | 23 |
| 921 | 21.37 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 1 |