Os03g0431800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os03g0431800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38.59 | 0.292 | 10.8 | -1.04 | 0.386 | -0.819 | -0.0107 | -0.186 | -0.000544 | 7.27 | 24.48 | 849 | -- | -- |
| 38.64 | 0.29 | 10.8 | -1.06 | 0.386 | -0.801 | -0.0469 | -- | -0.00471 | 7.33 | 24.5 | 850 | -- | -- |
| 38.59 | 0.289 | 10.8 | -1.04 | 0.385 | -0.821 | -- | -0.192 | -0.000152 | 7.26 | 24.42 | 851 | -- | -- |
| 38.64 | 0.29 | 10.8 | -1.07 | 0.385 | -0.798 | -- | -- | -0.00701 | 7.26 | 24.5 | 851 | -- | -- |
| 43.96 | 0.309 | 10.8 | -1.09 | -- | -0.809 | -- | 0.029 | -0.0256 | -- | 27.69 | 1359 | -- | -- |
| 47.8 | 0.324 | 10.8 | -0.842 | 0.341 | -- | 0.0436 | -- | 0.153 | 6.26 | -- | -- | -- | -- |
| 47.8 | 0.324 | 10.8 | -0.841 | 0.342 | -- | -- | -- | 0.153 | 6.27 | -- | -- | -- | -- |
| 43.96 | 0.309 | 10.8 | -1.09 | -- | -0.814 | -- | -- | -0.0257 | -- | 27.7 | 1358 | -- | -- |
| 64.75 | 0.375 | 10.7 | -- | 0.35 | -0.318 | -- | -- | 0.193 | 6.78 | 24.4 | 730 | -- | -- |
| 53.86 | 0.343 | 10.8 | -0.832 | -- | -- | -- | -- | 0.161 | -- | -- | -- | -- | -- |
| 66.44 | 0.381 | 10.7 | -- | 0.33 | -- | -- | -- | 0.247 | 6.41 | -- | -- | -- | -- |
| 70.32 | 0.391 | 10.8 | -- | -- | -0.302 | -- | -- | 0.208 | -- | 35.71 | 1318 | -- | -- |
| 72.11 | 0.396 | 10.7 | -- | -- | -- | -- | -- | 0.253 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 37.56 | temperature | 10 | 720 | > th | dose dependent | rect. | 18 | 19 |
| 4 | 37.75 | temperature | 15 | 720 | > th | dose dependent | rect. | 20 | 17 |
| 5 | 37.76 | temperature | 15 | 720 | > th | dose dependent | rect. | 18 | 17 |
| 16 | 38.10 | temperature | 15 | 720 | > th | dose dependent | sin | 8 | NA |
| 25 | 38.20 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 18 |
| 27 | 38.21 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 16 |
| 64 | 38.44 | temperature | 25 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 65 | 38.44 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 13 |
| 74 | 38.46 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 81 | 38.47 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 13 |
| 109 | 38.51 | temperature | 10 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 110 | 38.51 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 12 |
| 130 | 38.54 | temperature | 30 | 1440 | < th | dose dependent | sin | 13 | NA |
| 142 | 38.55 | temperature | 30 | 720 | < th | dose dependent | sin | 9 | NA |
| 163 | 38.57 | temperature | 10 | 1440 | > th | dose dependent | sin | 12 | NA |
| 208 | 38.60 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 4 |
| 367 | 38.72 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 430 | 38.75 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 3 |
| 433 | 38.75 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 6 |
| 509 | 38.77 | temperature | 25 | 720 | < th | dose dependent | rect. | 22 | 23 |
| 590 | 38.80 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 10 |
| 616 | 38.81 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 10 |
| 671 | 38.83 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 800 | 38.86 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 1 |