Os03g0423800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os03g0423800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 13.83 | 0.175 | 11.2 | -0.00959 | 0.464 | 0.268 | 0.0473 | 1.14 | 0.237 | 3.02 | 0.1233 | 4680 | -- | -- |
| 13.67 | 0.172 | 11.3 | -0.0424 | 0.466 | 0.545 | 0.0655 | -- | 0.241 | 2.95 | 0.487 | 2771 | -- | -- |
| 13.41 | 0.171 | 11.2 | 0.0725 | 0.451 | 0.148 | -- | 1.45 | 0.235 | 3.05 | 0.5 | 2813 | -- | -- |
| 13.65 | 0.172 | 11.3 | -0.0348 | 0.461 | 0.562 | -- | -- | 0.235 | 3.01 | 0.4787 | 2816 | -- | -- |
| 25.07 | 0.233 | 11.2 | 0.365 | -- | -0.844 | -- | 5.08 | 0.251 | -- | 0.8175 | 2641 | -- | -- |
| 19.28 | 0.206 | 11.3 | 0.132 | 0.473 | -- | 0.133 | -- | 0.2 | 2.99 | -- | -- | -- | -- |
| 19.33 | 0.206 | 11.3 | 0.129 | 0.473 | -- | -- | -- | 0.199 | 2.97 | -- | -- | -- | -- |
| 25.7 | 0.236 | 11.3 | -0.022 | -- | 0.593 | -- | -- | 0.246 | -- | 0.5 | 2642 | -- | -- |
| 13.68 | 0.172 | 11.3 | -- | 0.461 | 0.545 | -- | -- | 0.236 | 3 | 0.4841 | 2817 | -- | -- |
| 32.18 | 0.265 | 11.3 | 0.15 | -- | -- | -- | -- | 0.211 | -- | -- | -- | -- | -- |
| 19.78 | 0.208 | 11.3 | -- | 0.475 | -- | -- | -- | 0.185 | 2.97 | -- | -- | -- | -- |
| 25.71 | 0.236 | 11.3 | -- | -- | 0.583 | -- | -- | 0.247 | -- | 0.5 | 2576 | -- | -- |
| 32.77 | 0.267 | 11.3 | -- | -- | -- | -- | -- | 0.195 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 12.24 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 13 |
| 3 | 12.24 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 14 |
| 4 | 12.24 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 14 |
| 31 | 12.30 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 16 |
| 34 | 12.32 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 40 | 12.36 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 3 |
| 42 | 12.37 | wind | 1.0 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 43 | 12.37 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 3 |
| 45 | 12.38 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 3 |
| 47 | 12.38 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 3 |
| 51 | 12.39 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 6 |
| 52 | 12.39 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 6 |
| 55 | 12.39 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 6 |
| 82 | 12.45 | precipitation | 0.1 | 14400 | > th | dose dependent | sin | 1 | NA |
| 95 | 12.49 | precipitation | 0.1 | 14400 | > th | dose independent | sin | 0 | NA |
| 99 | 12.50 | precipitation | 0.1 | 14400 | < th | dose independent | sin | 0 | NA |
| 102 | 12.50 | precipitation | 0.1 | 14400 | < th | dose dependent | sin | 0 | NA |
| 108 | 12.51 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 12 | 8 |
| 109 | 12.51 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 8 | 9 |
| 192 | 12.68 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 259 | 12.83 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 24 | 5 |
| 270 | 12.86 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 19 |
| 271 | 12.86 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 19 |
| 274 | 12.86 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 19 |
| 320 | 12.97 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 338 | 13.01 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 345 | 13.02 | wind | 1.0 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 384 | 13.09 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 24 | 1 |
| 476 | 13.23 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 570 | 13.36 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 583 | 13.37 | precipitation | 0.1 | 14400 | > th | dose dependent | no | NA | NA |
| 590 | 13.37 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 12 | 22 |
| 595 | 13.38 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 619 | 13.39 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 23 |
| 621 | 13.39 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 23 |
| 629 | 13.40 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 7 | 23 |
| 630 | 13.41 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 680 | 13.45 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 2 |
| 683 | 13.45 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 11 |
| 721 | 13.48 | wind | 3.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 753 | 13.50 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 2 |
| 764 | 13.52 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 2 |
| 766 | 13.52 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 2 |
| 774 | 13.52 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 23 |
| 840 | 13.57 | wind | 3.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 877 | 13.60 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 895 | 13.61 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 4 |
| 921 | 13.63 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 5 |
| 952 | 13.65 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 18 |
| 998 | 13.69 | wind | 3.0 | 14400 | < th | dose independent | rect. | 21 | 9 |
| 999 | 13.69 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 11 |
| 1000 | 13.69 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 14 | 20 |