Os03g0421700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Fumarylacetoacetate (FAA) hydrolase family protein.
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Os03g0421700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Fumarylacetoacetate (FAA) hydrolase family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 30.16 | 0.258 | 10.1 | 0.185 | 0.146 | -0.312 | -0.000376 | -0.586 | 0.131 | 6.24 | 67.12 | 1476 | -- | -- |
| 30.87 | 0.259 | 10.1 | 0.244 | 0.0901 | -0.421 | 0.0844 | -- | 0.137 | 7.85 | 67.14 | 1710 | -- | -- |
| 30.16 | 0.256 | 10.1 | 0.185 | 0.146 | -0.312 | -- | -0.586 | 0.131 | 6.24 | 67.12 | 1476 | -- | -- |
| 30.85 | 0.259 | 10.1 | 0.245 | 0.0872 | -0.426 | -- | -- | 0.141 | 7.63 | 68 | 1712 | -- | -- |
| 30.57 | 0.258 | 10.1 | 0.172 | -- | -0.385 | -- | -0.589 | 0.136 | -- | 67 | 1743 | -- | -- |
| 36.04 | 0.281 | 10.1 | 0.176 | 0.137 | -- | 0.0018 | -- | 0.161 | 6.72 | -- | -- | -- | -- |
| 36.04 | 0.281 | 10.1 | 0.176 | 0.137 | -- | -- | -- | 0.161 | 6.71 | -- | -- | -- | -- |
| 31.23 | 0.26 | 10.1 | 0.24 | -- | -0.434 | -- | -- | 0.14 | -- | 68 | 1737 | -- | -- |
| 32.32 | 0.265 | 10.1 | -- | 0.0916 | -0.392 | -- | -- | 0.118 | 7.39 | 67 | 1712 | -- | -- |
| 37.02 | 0.284 | 10.1 | 0.179 | -- | -- | -- | -- | 0.164 | -- | -- | -- | -- | -- |
| 36.86 | 0.284 | 10.1 | -- | 0.139 | -- | -- | -- | 0.141 | 6.64 | -- | -- | -- | -- |
| 32.74 | 0.266 | 10.1 | -- | -- | -0.405 | -- | -- | 0.119 | -- | 67.02 | 1725 | -- | -- |
| 37.87 | 0.287 | 10.1 | -- | -- | -- | -- | -- | 0.144 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 26.66 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 6 | 27.29 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 9 | 27.63 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 3 |
| 10 | 27.68 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 23 | 8 |
| 12 | 27.70 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 23 | 8 |
| 25 | 27.81 | wind | 7.0 | 43200 | < th | dose dependent | rect. | 23 | 5 |
| 30 | 27.86 | wind | 3.0 | 43200 | > th | dose independent | rect. | 23 | 8 |
| 33 | 27.91 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 3 |
| 35 | 27.92 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 8 |
| 40 | 27.96 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 11 |
| 47 | 28.00 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 6 |
| 52 | 28.03 | wind | 3.0 | 43200 | < th | dose independent | rect. | 23 | 5 |
| 57 | 28.04 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 11 |
| 58 | 28.04 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 11 |
| 59 | 28.05 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 23 | 5 |
| 60 | 28.06 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 61 | 28.06 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 67 | 28.08 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 6 |
| 71 | 28.10 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 79 | 28.14 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 5 |
| 89 | 28.17 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 13 |
| 93 | 28.19 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 97 | 28.21 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 98 | 28.21 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 104 | 28.22 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 8 | 7 |
| 112 | 28.25 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 3 |
| 115 | 28.25 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 3 |
| 118 | 28.26 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 5 |
| 121 | 28.26 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 3 |
| 125 | 28.27 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 10 |
| 126 | 28.28 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 127 | 28.28 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 7 | 5 |
| 130 | 28.29 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 131 | 28.29 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 9 |
| 132 | 28.30 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 5 | 5 |
| 134 | 28.30 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 4 | 3 |
| 136 | 28.30 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 5 | 5 |
| 137 | 28.30 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 11 |
| 146 | 28.34 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 3 |
| 154 | 28.35 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 180 | 28.40 | wind | 9.0 | 14400 | > th | dose independent | rect. | 6 | 5 |
| 191 | 28.42 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 7 | 5 |
| 192 | 28.42 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 213 | 28.45 | wind | 9.0 | 14400 | < th | dose independent | rect. | 5 | 6 |
| 255 | 28.51 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 7 | 5 |
| 258 | 28.51 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 265 | 28.52 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 274 | 28.54 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 287 | 28.56 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 9 | 5 |
| 317 | 28.59 | temperature | 20.0 | 270 | > th | dose independent | rect. | 4 | 20 |
| 321 | 28.60 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 3 |
| 324 | 28.60 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 22 | NA |
| 344 | 28.63 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 346 | 28.63 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 3 |
| 366 | 28.66 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 12 | 3 |
| 387 | 28.68 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 19 |
| 404 | 28.71 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 14 | 2 |
| 410 | 28.71 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 14 | 2 |
| 421 | 28.72 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 2 |
| 435 | 28.74 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 436 | 28.74 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 455 | 28.76 | humidity | 60.0 | 1440 | > th | dose dependent | rect. | 10 | 1 |
| 473 | 28.78 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 12 | 2 |
| 484 | 28.80 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 7 | 14 |
| 501 | 28.81 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 8 |
| 506 | 28.82 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 4 |
| 513 | 28.82 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 15 | 6 |
| 548 | 28.86 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 550 | 28.86 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 7 | 7 |
| 552 | 28.86 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 18 | 18 |
| 557 | 28.87 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 592 | 28.89 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 7 | 21 |
| 618 | 28.93 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 18 | 3 |
| 619 | 28.93 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 7 | 3 |
| 621 | 28.93 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 8 |
| 650 | 28.95 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 18 | 5 |
| 659 | 28.95 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 5 | 6 |
| 667 | 28.96 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 842 | 29.07 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 5 | 6 |
| 857 | 29.08 | wind | 3.0 | 43200 | > th | dose independent | sin | 8 | NA |
| 873 | 29.09 | temperature | 25.0 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 889 | 29.10 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 905 | 29.11 | wind | 9.0 | 43200 | < th | dose independent | rect. | 3 | 11 |
| 908 | 29.11 | wind | 9.0 | 43200 | < th | dose independent | rect. | 1 | 13 |
| 909 | 29.11 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 18 | 18 |
| 915 | 29.12 | wind | 3.0 | 43200 | < th | dose independent | sin | 8 | NA |
| 916 | 29.12 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 922 | 29.12 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 5 | 6 |
| 931 | 29.12 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 935 | 29.12 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 5 | 6 |
| 989 | 29.16 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 991 | 29.16 | wind | 9.0 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 999 | 29.16 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 11 | 11 |