Os03g0421400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Band 7 protein family protein.
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Os03g0421400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Band 7 protein family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34.99 | 0.278 | 9.58 | 0.899 | 0.263 | -0.594 | 0.414 | 0.264 | 0.274 | 14.7 | 10.01 | 223 | -- | -- |
| 34.84 | 0.275 | 9.58 | 0.897 | 0.251 | -0.576 | 0.51 | -- | 0.255 | 14.2 | 10.01 | 201 | -- | -- |
| 35.02 | 0.276 | 9.58 | 0.896 | 0.223 | -0.572 | -- | 0.534 | 0.276 | 14.6 | 10 | 203 | -- | -- |
| 36.22 | 0.28 | 9.58 | 0.893 | 0.239 | -0.565 | -- | -- | 0.273 | 14.5 | 10 | 200 | -- | -- |
| 36.14 | 0.28 | 9.58 | 0.87 | -- | -0.406 | -- | 0.604 | 0.268 | -- | 10.11 | 204 | -- | -- |
| 41.96 | 0.304 | 9.59 | 0.794 | 0.309 | -- | -0.449 | -- | 0.218 | 1.23 | -- | -- | -- | -- |
| 42.79 | 0.306 | 9.59 | 0.81 | 0.309 | -- | -- | -- | 0.22 | 1.11 | -- | -- | -- | -- |
| 37.27 | 0.284 | 9.58 | 0.872 | -- | -0.382 | -- | -- | 0.25 | -- | 10 | 197 | -- | -- |
| 53.19 | 0.34 | 9.59 | -- | 0.197 | -0.53 | -- | -- | 0.187 | 14.2 | 8.757 | 200 | -- | -- |
| 48.73 | 0.326 | 9.59 | 0.822 | -- | -- | -- | -- | 0.226 | -- | -- | -- | -- | -- |
| 60.09 | 0.363 | 9.61 | -- | 0.323 | -- | -- | -- | 0.13 | 1.21 | -- | -- | -- | -- |
| 54.69 | 0.344 | 9.6 | -- | -- | -0.362 | -- | -- | 0.197 | -- | 8.985 | 191 | -- | -- |
| 66.55 | 0.381 | 9.61 | -- | -- | -- | -- | -- | 0.135 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.25 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 5 | 12 |
| 4 | 32.66 | radiation | 1.0 | 270 | < th | dose independent | rect. | 4 | 14 |
| 6 | 32.74 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 8 | 21 |
| 9 | 32.94 | humidity | 80.0 | 90 | > th | dose independent | rect. | 5 | 14 |
| 18 | 33.25 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 5 | 13 |
| 23 | 33.36 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 5 | 15 |
| 34 | 33.54 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 11 |
| 56 | 33.66 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 11 | 20 |
| 59 | 33.72 | radiation | 10.0 | 90 | < th | dose independent | rect. | 5 | 12 |
| 72 | 33.90 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 22 |
| 82 | 33.97 | radiation | 10.0 | 270 | > th | dose independent | rect. | 15 | 22 |
| 97 | 34.05 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 8 | 21 |
| 105 | 34.09 | radiation | 20.0 | 270 | < th | dose independent | rect. | 11 | 20 |
| 122 | 34.22 | wind | 5.0 | 90 | < th | dose independent | rect. | 8 | 21 |
| 139 | 34.35 | radiation | 10.0 | 270 | < th | dose dependent | sin | 1 | NA |
| 154 | 34.40 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 5 | 6 |
| 156 | 34.41 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 5 | 8 |
| 163 | 34.45 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 5 | 4 |
| 166 | 34.48 | radiation | 1.0 | 270 | > th | dose independent | sin | 1 | NA |
| 227 | 34.78 | temperature | 15.0 | 90 | > th | dose independent | rect. | 8 | 21 |
| 238 | 34.83 | radiation | 1.0 | 270 | < th | dose independent | sin | 1 | NA |
| 264 | 34.91 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 14 | 18 |
| 265 | 34.91 | wind | 9.0 | 90 | < th | dose dependent | rect. | 8 | 21 |
| 276 | 34.95 | wind | 1.0 | 270 | > th | dose independent | rect. | 4 | 2 |
| 279 | 34.96 | radiation | 20.0 | 90 | < th | dose independent | rect. | 5 | 4 |
| 327 | 35.08 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 22 |
| 329 | 35.08 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 22 |
| 338 | 35.12 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 8 | 21 |
| 342 | 35.12 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 8 | 21 |
| 343 | 35.13 | wind | 1.0 | 90 | > th | dose independent | rect. | 4 | 4 |
| 362 | 35.14 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 1 | 23 |
| 375 | 35.18 | radiation | 20.0 | 90 | < th | dose independent | rect. | 4 | 7 |
| 376 | 35.18 | humidity | 90.0 | 30 | < th | dose independent | rect. | 8 | 11 |
| 379 | 35.19 | radiation | 10.0 | 270 | > th | dose independent | sin | 3 | NA |
| 413 | 35.26 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 18 | 9 |
| 421 | 35.28 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 4 | 2 |
| 440 | 35.31 | wind | 7.0 | 10 | < th | dose independent | rect. | 8 | 21 |
| 459 | 35.35 | wind | 9.0 | 270 | < th | dose independent | rect. | 4 | 2 |
| 460 | 35.35 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 2 |
| 462 | 35.35 | temperature | 30.0 | 270 | < th | dose independent | rect. | 4 | 2 |
| 463 | 35.35 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 2 |
| 466 | 35.35 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 2 |
| 473 | 35.35 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 22 |
| 485 | 35.36 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 3 | 7 |
| 492 | 35.37 | radiation | 20.0 | 90 | < th | dose dependent | rect. | 4 | 23 |
| 494 | 35.38 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 2 |
| 496 | 35.38 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 2 |
| 497 | 35.38 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 5 | 4 |
| 530 | 35.42 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 5 | 15 |
| 546 | 35.45 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 5 | 6 |
| 559 | 35.46 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 19 | 23 |
| 564 | 35.47 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 4 | 2 |
| 572 | 35.48 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 20 | 9 |
| 600 | 35.52 | humidity | 80.0 | 90 | > th | dose independent | rect. | 5 | 6 |
| 602 | 35.52 | temperature | 25.0 | 270 | < th | dose independent | rect. | 13 | 8 |
| 644 | 35.55 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 8 | 21 |
| 658 | 35.57 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 18 | 9 |
| 660 | 35.57 | temperature | 25.0 | 10 | < th | dose dependent | sin | 20 | NA |
| 664 | 35.58 | wind | 9.0 | 4320 | < th | dose independent | rect. | 6 | 3 |
| 707 | 35.62 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 20 | 9 |
| 715 | 35.63 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 6 | 3 |
| 718 | 35.63 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 6 | 3 |
| 720 | 35.63 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 6 | 3 |
| 721 | 35.63 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 6 | 3 |
| 724 | 35.63 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 9 | 21 |
| 747 | 35.65 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 782 | 35.68 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 5 | 2 |
| 791 | 35.69 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 3 | 4 |
| 805 | 35.70 | humidity | 80.0 | 90 | > th | dose independent | sin | 1 | NA |
| 841 | 35.73 | humidity | 70.0 | 10 | > th | dose dependent | sin | 23 | NA |
| 860 | 35.75 | humidity | 80.0 | 270 | > th | dose independent | rect. | 2 | 16 |
| 872 | 35.76 | wind | 9.0 | 90 | < th | dose dependent | rect. | 5 | 3 |
| 902 | 35.79 | humidity | 80.0 | 90 | < th | dose independent | sin | 1 | NA |
| 931 | 35.82 | humidity | 80.0 | 10 | < th | dose independent | sin | 0 | NA |
| 979 | 35.86 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 18 | 11 |
| 984 | 35.86 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 5 | 3 |