Os03g0417900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to ARE1-like protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0417900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to ARE1-like protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 65.12 | 0.379 | 7.98 | 0.887 | 0.465 | 0.624 | 0.258 | 0.0897 | 0.331 | 12.8 | 17.81 | 11 | -- | -- |
| 65.14 | 0.376 | 7.97 | 0.885 | 0.46 | 0.62 | 0.188 | -- | 0.333 | 12.8 | 17.81 | 11 | -- | -- |
| 65.24 | 0.376 | 7.97 | 0.885 | 0.464 | 0.622 | -- | -0.0715 | 0.339 | 12.7 | 17.78 | 11 | -- | -- |
| 65.27 | 0.376 | 7.97 | 0.89 | 0.463 | 0.622 | -- | -- | 0.331 | 12.7 | 17.76 | 11 | -- | -- |
| 71.39 | 0.394 | 7.98 | 0.87 | -- | 0.335 | -- | -0.0787 | 0.351 | -- | 19.82 | 19 | -- | -- |
| 78.52 | 0.415 | 7.98 | 0.866 | 0.0738 | -- | 0.545 | -- | 0.335 | 19 | -- | -- | -- | -- |
| 78.96 | 0.416 | 7.98 | 0.852 | 0.103 | -- | -- | -- | 0.335 | 22.1 | -- | -- | -- | -- |
| 70.91 | 0.392 | 7.98 | 0.865 | -- | 0.317 | -- | -- | 0.326 | -- | 17.81 | 9 | -- | -- |
| 86.15 | 0.432 | 7.99 | -- | 0.417 | 0.589 | -- | -- | 0.235 | 12.6 | 17.85 | 12 | -- | -- |
| 79.6 | 0.417 | 7.98 | 0.854 | -- | -- | -- | -- | 0.335 | -- | -- | -- | -- | -- |
| 98.11 | 0.463 | 8 | -- | 0.108 | -- | -- | -- | 0.24 | 22.7 | -- | -- | -- | -- |
| 90.17 | 0.442 | 8 | -- | -- | 0.347 | -- | -- | 0.237 | -- | 19.86 | 12 | -- | -- |
| 98.83 | 0.464 | 8 | -- | -- | -- | -- | -- | 0.24 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 57.34 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 6 | 59.38 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 11 | 59.84 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 5 | 17 |
| 12 | 59.90 | radiation | 20.0 | 10 | < th | dose independent | rect. | 5 | 17 |
| 13 | 60.02 | radiation | 20.0 | 270 | < th | dose independent | rect. | 1 | 7 |
| 14 | 60.07 | wind | 7.0 | 270 | < th | dose independent | rect. | 7 | 18 |
| 21 | 60.46 | temperature | 15.0 | 270 | > th | dose independent | rect. | 13 | 18 |
| 22 | 60.46 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 21 |
| 23 | 60.49 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 1 | 7 |
| 25 | 60.50 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 12 | 9 |
| 26 | 60.50 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 18 |
| 27 | 60.50 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 18 |
| 29 | 60.54 | humidity | 70.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 30 | 60.55 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 33 | 60.55 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 35 | 60.55 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 36 | 60.55 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 39 | 60.55 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 18 |
| 40 | 60.56 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 43 | 60.63 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 64 | 60.75 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 6 |
| 65 | 60.75 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 80 | 60.94 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 85 | 60.98 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 5 | 13 |
| 87 | 61.00 | radiation | 10.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 88 | 61.00 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 6 |
| 89 | 61.04 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 3 |
| 90 | 61.04 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 93 | 61.04 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 96 | 61.04 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 3 |
| 101 | 61.04 | temperature | 10.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 102 | 61.04 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 105 | 61.06 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 21 |
| 107 | 61.06 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 21 |
| 110 | 61.10 | temperature | 15.0 | 270 | > th | dose independent | rect. | 12 | 9 |
| 120 | 61.17 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 18 |
| 123 | 61.26 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 6 |
| 136 | 61.31 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 3 |
| 137 | 61.31 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 146 | 61.36 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 6 |
| 147 | 61.36 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 6 |
| 148 | 61.36 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 6 |
| 149 | 61.36 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 6 |
| 151 | 61.36 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 152 | 61.36 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 6 |
| 156 | 61.42 | radiation | 1.0 | 270 | > th | dose independent | rect. | 7 | 6 |
| 165 | 61.47 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 13 | 18 |
| 169 | 61.50 | wind | 9.0 | 270 | < th | dose independent | rect. | 21 | 15 |
| 173 | 61.54 | wind | 7.0 | 270 | < th | dose independent | rect. | 18 | 9 |
| 179 | 61.57 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 13 | 18 |
| 193 | 61.70 | temperature | 10.0 | 270 | > th | dose independent | rect. | 21 | 15 |
| 194 | 61.70 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 15 |
| 195 | 61.70 | radiation | 40.0 | 270 | < th | dose independent | rect. | 13 | 18 |
| 206 | 61.78 | humidity | 50.0 | 270 | > th | dose independent | rect. | 7 | 6 |
| 214 | 61.82 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 18 |
| 215 | 61.83 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 15 |
| 217 | 61.83 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 15 |
| 221 | 61.87 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 19 |
| 241 | 62.04 | radiation | 20.0 | 10 | < th | dose independent | rect. | 5 | 13 |
| 260 | 62.18 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 5 | 5 |
| 272 | 62.20 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 12 | 8 |
| 278 | 62.25 | temperature | 10.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 279 | 62.25 | humidity | 50.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 280 | 62.25 | radiation | 20.0 | 270 | < th | dose independent | rect. | 18 | 9 |
| 283 | 62.25 | temperature | 10.0 | 270 | > th | dose independent | rect. | 3 | 15 |
| 284 | 62.25 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 15 |
| 285 | 62.25 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 3 | 15 |
| 301 | 62.28 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 18 | 9 |
| 309 | 62.33 | humidity | 50.0 | 270 | > th | dose independent | rect. | 14 | 17 |
| 311 | 62.36 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 18 | 9 |
| 323 | 62.42 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 328 | 62.43 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 18 | 9 |
| 332 | 62.43 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 18 | 9 |
| 336 | 62.45 | wind | 1.0 | 270 | > th | dose independent | rect. | 12 | 9 |
| 337 | 62.45 | wind | 9.0 | 270 | < th | dose independent | rect. | 12 | 9 |
| 340 | 62.47 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 18 |
| 341 | 62.47 | wind | 9.0 | 270 | < th | dose dependent | rect. | 7 | 6 |
| 342 | 62.47 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 18 |
| 381 | 62.65 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 12 | 9 |
| 383 | 62.65 | radiation | 20.0 | 10 | < th | dose independent | rect. | 3 | 19 |
| 384 | 62.65 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 12 | 9 |
| 390 | 62.67 | wind | 1.0 | 270 | > th | dose independent | rect. | 7 | 6 |
| 402 | 62.69 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 405 | 62.70 | wind | 9.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 426 | 62.84 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 18 |
| 454 | 62.92 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 21 | 8 |
| 460 | 62.96 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 3 | 15 |
| 466 | 62.99 | radiation | 20.0 | 30 | < th | dose independent | rect. | 5 | 5 |
| 508 | 63.03 | wind | 9.0 | 270 | < th | dose dependent | rect. | 2 | 5 |
| 539 | 63.12 | radiation | 20.0 | 10 | < th | dose dependent | sin | 23 | NA |
| 544 | 63.13 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 15 |
| 561 | 63.21 | radiation | 20.0 | 10 | < th | dose independent | rect. | 5 | 3 |
| 585 | 63.29 | radiation | 40.0 | 30 | < th | dose independent | rect. | 5 | 16 |
| 600 | 63.33 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 2 | 11 |
| 607 | 63.36 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 15 |
| 609 | 63.36 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 15 |
| 616 | 63.41 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 5 | 5 |
| 634 | 63.49 | radiation | 1.0 | 270 | < th | dose independent | rect. | 3 | 12 |
| 645 | 63.53 | radiation | 1.0 | 10 | < th | dose dependent | sin | 11 | NA |
| 660 | 63.57 | humidity | 50.0 | 270 | > th | dose independent | rect. | 12 | 8 |
| 670 | 63.59 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 2 | 16 |
| 673 | 63.60 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 1 | 6 |
| 694 | 63.65 | temperature | 30.0 | 270 | < th | dose independent | rect. | 18 | 9 |
| 696 | 63.66 | humidity | 70.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 701 | 63.67 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 5 | 3 |
| 702 | 63.68 | wind | 1.0 | 270 | > th | dose independent | rect. | 18 | 8 |
| 739 | 63.75 | humidity | 90.0 | 270 | < th | dose independent | rect. | 20 | 16 |
| 741 | 63.75 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 18 | 9 |
| 762 | 63.82 | humidity | 90.0 | 270 | > th | dose independent | rect. | 1 | 6 |
| 763 | 63.82 | wind | 7.0 | 10 | < th | dose independent | rect. | 8 | 21 |
| 780 | 63.85 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 15 | 18 |
| 843 | 63.93 | temperature | 30.0 | 270 | < th | dose independent | rect. | 19 | 7 |
| 855 | 63.93 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 856 | 63.93 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 3 | 3 |
| 862 | 63.94 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 5 | 3 |
| 897 | 63.97 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 21 |
| 925 | 64.02 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 3 |
| 934 | 64.04 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 7 | 18 |
| 974 | 64.13 | wind | 9.0 | 270 | < th | dose dependent | rect. | 18 | 8 |
| 975 | 64.13 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 14 | 20 |